RNA–Protein interactions for RNA: ENST00000556790.1

LGMN-213, Transcript of legumain, humanhuman

TSL 2

Gene LGMN, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-213ENST00000556790 LINC00301Q8NCQ3 95 aa6.89□□□□□ -1.31
LGMN-213ENST00000556790 OR10T2Q8NGX3 314 aa6.89□□□□□ -1.31
LGMN-213ENST00000556790 TTC8Q8TAM2 541 aa6.89□□□□□ -1.31
LGMN-213ENST00000556790 POMGNT1Q8WZA1 660 aa6.89□□□□□ -1.31
LGMN-213ENST00000556790 RSPRY1Q96DX4 576 aa6.89□□□□□ -1.31
LGMN-213ENST00000556790 SUSD3Q96L08 255 aa6.89□□□□□ -1.31
LGMN-213ENST00000556790 SENP8Q96LD8 212 aa6.89□□□□□ -1.31
LGMN-213ENST00000556790 UROC1Q96N76 676 aa6.89□□□□□ -1.31
LGMN-213ENST00000556790 LPIN3Q9BQK8 851 aa6.89□□□□□ -1.31
LGMN-213ENST00000556790 RTP3Q9BQQ7 232 aa6.89□□□□□ -1.31
LGMN-213ENST00000556790 CBWD1Q9BRT8 395 aa6.89□□□□□ -1.31
LGMN-213ENST00000556790 FAM213AQ9BRX8 229 aa6.89□□□□□ -1.31
LGMN-213ENST00000556790 TIPINQ9BVW5 301 aa6.89□□□□□ -1.31
LGMN-213ENST00000556790 STRA6Q9BX79 667 aa6.89□□□□□ -1.31
LGMN-213ENST00000556790 MRPL44Q9H9J2 332 aaKnown RBP6.89□□□□□ -1.31
LGMN-213ENST00000556790 RPF1Q9H9Y2 349 aaKnown RBP6.89□□□□□ -1.31
LGMN-213ENST00000556790 C17orf75Q9HAS0 396 aa6.89□□□□□ -1.31
LGMN-213ENST00000556790 ZNF334Q9HCZ1 680 aaPredicted RBP6.89□□□□□ -1.31
LGMN-213ENST00000556790 ZDHHC7Q9NXF8 308 aa6.89□□□□□ -1.31
LGMN-213ENST00000556790 EPS15L1Q9UBC2 864 aa6.89□□□□□ -1.31
LGMN-213ENST00000556790 AGO2Q9UKV8 859 aaKnown RBP6.89□□□□□ -1.31
LGMN-213ENST00000556790 INSL5Q9Y5Q6 135 aa6.89□□□□□ -1.31
LGMN-213ENST00000556790 CACNA1HO95180 2353 aa6.89□□□□□ -1.31
LGMN-213ENST00000556790 CARNS1A5YM72 827 aa6.88□□□□□ -1.31
LGMN-213ENST00000556790 CLIC2O15247 247 aa6.88□□□□□ -1.31
LGMN-213ENST00000556790 SPTLC2O15270 562 aa6.88□□□□□ -1.31
LGMN-213ENST00000556790 ABLIM3O94929 683 aa6.88□□□□□ -1.31
LGMN-213ENST00000556790 LRG1P02750 347 aa6.88□□□□□ -1.31
LGMN-213ENST00000556790 PDCP20941 246 aa6.88□□□□□ -1.31
LGMN-213ENST00000556790 FCARP24071 287 aa6.88□□□□□ -1.31
LGMN-213ENST00000556790 ACAT1P24752 427 aaKnown RBP6.88□□□□□ -1.31
LGMN-213ENST00000556790 LRPAP1P30533 357 aa6.88□□□□□ -1.31
LGMN-213ENST00000556790 VIPR2P41587 438 aa6.88□□□□□ -1.31
LGMN-213ENST00000556790 NASPP49321 788 aaPredicted RBP6.88□□□□□ -1.31
LGMN-213ENST00000556790 LILRA4P59901 499 aa6.88□□□□□ -1.31
LGMN-213ENST00000556790 ELAVL2Q12926 359 aaKnown RBP6.88□□□□□ -1.31
LGMN-213ENST00000556790 DUSP4Q13115 394 aa6.88□□□□□ -1.31
LGMN-213ENST00000556790 TMEM132DQ14C87 1099 aa6.88□□□□□ -1.31
LGMN-213ENST00000556790 TEAD2Q15562 447 aa6.88□□□□□ -1.31
LGMN-213ENST00000556790 E2F4Q16254 413 aa6.88□□□□□ -1.31
LGMN-213ENST00000556790 PRSS36Q5K4E3 855 aa6.88□□□□□ -1.31
LGMN-213ENST00000556790 SPATA1Q5VX52 437 aa6.88□□□□□ -1.31
LGMN-213ENST00000556790 ASTLQ6HA08 431 aaPredicted RBP6.88□□□□□ -1.31
LGMN-213ENST00000556790 SLC8B1Q6J4K2 584 aa6.88□□□□□ -1.31
LGMN-213ENST00000556790 ANKS3Q6ZW76 656 aa6.88□□□□□ -1.31
LGMN-213ENST00000556790 SV2BQ7L1I2 683 aa6.88□□□□□ -1.31
LGMN-213ENST00000556790 LRRTM3Q86VH5 581 aa6.88□□□□□ -1.31
LGMN-213ENST00000556790 OSTM1Q86WC4 334 aa6.88□□□□□ -1.31
LGMN-213ENST00000556790 NELFCDQ8IXH7 590 aa6.88□□□□□ -1.31
LGMN-213ENST00000556790 UBALD2Q8IYN6 164 aa6.88□□□□□ -1.31
LGMN-213ENST00000556790 RDH13Q8NBN7 331 aa6.88□□□□□ -1.31
LGMN-213ENST00000556790 ZNF461Q8TAF7 563 aa6.88□□□□□ -1.31
LGMN-213ENST00000556790 GIPC2Q8TF65 315 aa6.88□□□□□ -1.31
LGMN-213ENST00000556790 ATOH1Q92858 354 aaPredicted RBP6.88□□□□□ -1.31
LGMN-213ENST00000556790 INTS4Q96HW7 963 aaKnown RBP6.88□□□□□ -1.31
LGMN-213ENST00000556790 RHOBTB2Q9BYZ6 727 aa6.88□□□□□ -1.31
LGMN-213ENST00000556790 SMG9Q9H0W8 520 aaKnown RBP6.88□□□□□ -1.31
LGMN-213ENST00000556790 DNAJC25Q9H1X3 360 aa6.88□□□□□ -1.31
LGMN-213ENST00000556790 TBC1D17Q9HA65 648 aa6.88□□□□□ -1.31
LGMN-213ENST00000556790 SLC38A7Q9NVC3 462 aa6.88□□□□□ -1.31
LGMN-213ENST00000556790 PANK4Q9NVE7 773 aa6.88□□□□□ -1.31
LGMN-213ENST00000556790 TMLHEQ9NVH6 421 aa6.88□□□□□ -1.31
LGMN-213ENST00000556790 KCND2Q9NZV8 630 aa6.88□□□□□ -1.31
LGMN-213ENST00000556790 STK39Q9UEW8 545 aa6.88□□□□□ -1.31
LGMN-213ENST00000556790 CCDC39Q9UFE4 941 aa6.88□□□□□ -1.31
LGMN-213ENST00000556790 CDH7Q9ULB5 785 aa6.88□□□□□ -1.31
LGMN-213ENST00000556790 UBQLN1Q9UMX0 589 aaKnown RBP6.88□□□□□ -1.31
LGMN-213ENST00000556790 PCDHB8Q9UN66 801 aa6.88□□□□□ -1.31
LGMN-213ENST00000556790 ZDHHC9Q9Y397 364 aa6.88□□□□□ -1.31
LGMN-213ENST00000556790 MRPS23Q9Y3D9 190 aaKnown RBP6.88□□□□□ -1.31
LGMN-213ENST00000556790 YIPF1Q9Y548 306 aa6.88□□□□□ -1.31
LGMN-213ENST00000556790 BACE2Q9Y5Z0 518 aa6.88□□□□□ -1.31
LGMN-213ENST00000556790 MIA3Q5JRA6 1907 aa6.88□□□□□ -1.31
LGMN-213ENST00000556790 COL4A2P08572 1712 aa6.87□□□□□ -1.31
LGMN-213ENST00000556790 PIEZO1Q92508 2521 aa6.87□□□□□ -1.31
LGMN-213ENST00000556790 A0A1W2PRU2 124 aa6.87□□□□□ -1.31
LGMN-213ENST00000556790 MTMR11A4FU01 709 aa6.87□□□□□ -1.31
LGMN-213ENST00000556790 SHISA7A6NL88 538 aa6.87□□□□□ -1.31
LGMN-213ENST00000556790 ANHXE9PGG2 379 aa6.87□□□□□ -1.31
LGMN-213ENST00000556790 M0QZQ0 153 aa6.87□□□□□ -1.31
LGMN-213ENST00000556790 POLR2DO15514 142 aaKnown RBP6.87□□□□□ -1.31
LGMN-213ENST00000556790 TRAPPC3O43617 180 aa6.87□□□□□ -1.31
LGMN-213ENST00000556790 BMP15O95972 392 aa6.87□□□□□ -1.31
LGMN-213ENST00000556790 F13A1P00488 732 aa6.87□□□□□ -1.31
LGMN-213ENST00000556790 ITGB3P05106 788 aa6.87□□□□□ -1.31
LGMN-213ENST00000556790 ZSCAN22P10073 491 aaPredicted RBP6.87□□□□□ -1.31
LGMN-213ENST00000556790 ATF2P15336 505 aa6.87□□□□□ -1.31
LGMN-213ENST00000556790 POLR2BP30876 1174 aaKnown RBP6.87□□□□□ -1.31
LGMN-213ENST00000556790 ELF1P32519 619 aa6.87□□□□□ -1.31
LGMN-213ENST00000556790 RPL9P32969 192 aaKnown RBP6.87□□□□□ -1.31
LGMN-213ENST00000556790 AFMP43652 599 aa6.87□□□□□ -1.31
LGMN-213ENST00000556790 CYP4F8P98187 520 aa6.87□□□□□ -1.31
LGMN-213ENST00000556790 TFAMQ00059 246 aaKnown RBP6.87□□□□□ -1.31
LGMN-213ENST00000556790 CREMQ03060 361 aa6.87□□□□□ -1.31
LGMN-213ENST00000556790 YWHAHQ04917 246 aaPredicted RBP6.87□□□□□ -1.31
LGMN-213ENST00000556790 CUL4BQ13620 913 aa6.87□□□□□ -1.31
LGMN-213ENST00000556790 SLC39A12Q504Y0 691 aa6.87□□□□□ -1.31
LGMN-213ENST00000556790 FAM78AQ5JUQ0 283 aa6.87□□□□□ -1.31
LGMN-213ENST00000556790 L1TD1Q5T7N2 865 aaKnown RBP6.87□□□□□ -1.31
LGMN-213ENST00000556790 WSCD1Q658N2 575 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms