RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 ECM1Q16610 540 aa12.99□□□□□ -0.33
ACTN1-221ENST00000556571 DGKKQ5KSL6 1271 aa12.99□□□□□ -0.33
ACTN1-221ENST00000556571 RNF19BQ6ZMZ0 732 aa12.99□□□□□ -0.33
ACTN1-221ENST00000556571 SHKBP1Q8TBC3 707 aa12.99□□□□□ -0.33
ACTN1-221ENST00000556571 DDX12PQ92771 950 aa12.99□□□□□ -0.33
ACTN1-221ENST00000556571 C18orf25Q96B23 403 aaPredicted RBP12.99□□□□□ -0.33
ACTN1-221ENST00000556571 TBC1D32Q96NH3 1257 aa12.99□□□□□ -0.33
ACTN1-221ENST00000556571 TARS2Q9BW92 718 aaKnown RBP12.99□□□□□ -0.33
ACTN1-221ENST00000556571 OXCT2Q9BYC2 517 aaPredicted RBP12.99□□□□□ -0.33
ACTN1-221ENST00000556571 PCDHB8Q9UN66 801 aa12.99□□□□□ -0.33
ACTN1-221ENST00000556571 KIAA1024Q9UPX6 916 aa12.99□□□□□ -0.33
ACTN1-221ENST00000556571 STK24Q9Y6E0 443 aa12.99□□□□□ -0.33
ACTN1-221ENST00000556571 SDK1Q7Z5N4 2213 aa12.98□□□□□ -0.33
ACTN1-221ENST00000556571 K7ESF4 209 aa12.98□□□□□ -0.33
ACTN1-221ENST00000556571 OAZ2O95190 189 aa12.98□□□□□ -0.33
ACTN1-221ENST00000556571 PROZP22891 400 aa12.98□□□□□ -0.33
ACTN1-221ENST00000556571 HOXA6P31267 233 aa12.98□□□□□ -0.33
ACTN1-221ENST00000556571 FXR2P51116 673 aaKnown RBP eCLIP12.98□□□□□ -0.33
ACTN1-221ENST00000556571 DMWDQ09019 674 aa12.98□□□□□ -0.33
ACTN1-221ENST00000556571 FCHO2Q0JRZ9 810 aa12.98□□□□□ -0.33
ACTN1-221ENST00000556571 MPZL3Q6UWV2 235 aa12.98□□□□□ -0.33
ACTN1-221ENST00000556571 CEP68Q76N32 757 aa12.98□□□□□ -0.33
ACTN1-221ENST00000556571 RALGPS2Q86X27 583 aaPredicted RBP12.98□□□□□ -0.33
ACTN1-221ENST00000556571 BEST2Q8NFU1 509 aa12.98□□□□□ -0.33
ACTN1-221ENST00000556571 KMT5AQ9NQR1 393 aa12.98□□□□□ -0.33
ACTN1-221ENST00000556571 RBM12Q9NTZ6 932 aaKnown RBP12.98□□□□□ -0.33
ACTN1-221ENST00000556571 ARHGAP28Q9P2N2 729 aa12.98□□□□□ -0.33
ACTN1-221ENST00000556571 LRWD1Q9UFC0 647 aa12.98□□□□□ -0.33
ACTN1-221ENST00000556571 YIPF1Q9Y548 306 aa12.98□□□□□ -0.33
ACTN1-221ENST00000556571 TRIP11Q15643 1979 aa12.98□□□□□ -0.33
ACTN1-221ENST00000556571 NCANO14594 1321 aa12.97□□□□□ -0.33
ACTN1-221ENST00000556571 A0A1W2PRU2 124 aa12.97□□□□□ -0.33
ACTN1-221ENST00000556571 MYBPHLA2RUH7 354 aa12.97□□□□□ -0.33
ACTN1-221ENST00000556571 SLC38A8A6NNN8 435 aa12.97□□□□□ -0.33
ACTN1-221ENST00000556571 ABLIM1O14639 778 aa12.97□□□□□ -0.33
ACTN1-221ENST00000556571 GDF9O60383 454 aa12.97□□□□□ -0.33
ACTN1-221ENST00000556571 LARGE1O95461 756 aa12.97□□□□□ -0.33
ACTN1-221ENST00000556571 EPHB3P54753 998 aa12.97□□□□□ -0.33
ACTN1-221ENST00000556571 YWHAHQ04917 246 aaPredicted RBP12.97□□□□□ -0.33
ACTN1-221ENST00000556571 SRSF5Q13243 272 aaKnown RBP12.97□□□□□ -0.33
ACTN1-221ENST00000556571 PDIA5Q14554 519 aa12.97□□□□□ -0.33
ACTN1-221ENST00000556571 HEATR6Q6AI08 1181 aaKnown RBP12.97□□□□□ -0.33
ACTN1-221ENST00000556571 TAS1R3Q7RTX0 852 aa12.97□□□□□ -0.33
ACTN1-221ENST00000556571 ARID3BQ8IVW6 561 aaPredicted RBP12.97□□□□□ -0.33
ACTN1-221ENST00000556571 SYNPOQ8N3V7 929 aa12.97□□□□□ -0.33
ACTN1-221ENST00000556571 FAM200AQ8TCP9 573 aa12.97□□□□□ -0.33
ACTN1-221ENST00000556571 RSPRY1Q96DX4 576 aa12.97□□□□□ -0.33
ACTN1-221ENST00000556571 DRC1Q96MC2 740 aa12.97□□□□□ -0.33
ACTN1-221ENST00000556571 LRRC3Q9BY71 257 aa12.97□□□□□ -0.33
ACTN1-221ENST00000556571 C17orf75Q9HAS0 396 aa12.97□□□□□ -0.33
ACTN1-221ENST00000556571 DDX19AQ9NUU7 478 aaKnown RBP12.97□□□□□ -0.33
ACTN1-221ENST00000556571 KCNG1Q9UIX4 513 aa12.97□□□□□ -0.33
ACTN1-221ENST00000556571 DNM3Q9UQ16 869 aa12.97□□□□□ -0.33
ACTN1-221ENST00000556571 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.97□□□□□ -0.33
ACTN1-221ENST00000556571 CEP295Q9C0D2 2601 aa12.97□□□□□ -0.33
ACTN1-221ENST00000556571 SPECC1L-ADORA2AF8WAN1 911 aa12.96□□□□□ -0.33
ACTN1-221ENST00000556571 M0QZQ0 153 aa12.96□□□□□ -0.33
ACTN1-221ENST00000556571 DPYSL4O14531 572 aa12.96□□□□□ -0.33
ACTN1-221ENST00000556571 MEFVO15553 781 aaPredicted RBP12.96□□□□□ -0.33
ACTN1-221ENST00000556571 HIP1RO75146 1068 aa12.96□□□□□ -0.33
ACTN1-221ENST00000556571 TOM1L1O75674 476 aa12.96□□□□□ -0.33
ACTN1-221ENST00000556571 HARSP12081 509 aaKnown RBP12.96□□□□□ -0.33
ACTN1-221ENST00000556571 CTHP32929 405 aa12.96□□□□□ -0.33
ACTN1-221ENST00000556571 ALDH1A3P47895 512 aa12.96□□□□□ -0.33
ACTN1-221ENST00000556571 SOX9P48436 509 aa12.96□□□□□ -0.33
ACTN1-221ENST00000556571 GUCY1B3Q02153 619 aa12.96□□□□□ -0.33
ACTN1-221ENST00000556571 SLC10A6Q3KNW5 377 aa12.96□□□□□ -0.33
ACTN1-221ENST00000556571 ARHGAP29Q52LW3 1261 aa12.96□□□□□ -0.33
ACTN1-221ENST00000556571 TTC38Q5R3I4 469 aa12.96□□□□□ -0.33
ACTN1-221ENST00000556571 IL31Q6EBC2 164 aa12.96□□□□□ -0.33
ACTN1-221ENST00000556571 Q6ZS52 159 aa12.96□□□□□ -0.33
ACTN1-221ENST00000556571 HAUS6Q7Z4H7 955 aa12.96□□□□□ -0.33
ACTN1-221ENST00000556571 USP37Q86T82 979 aa12.96□□□□□ -0.33
ACTN1-221ENST00000556571 WDR5BQ86VZ2 330 aa12.96□□□□□ -0.33
ACTN1-221ENST00000556571 TMC8Q8IU68 726 aa12.96□□□□□ -0.33
ACTN1-221ENST00000556571 DAW1Q8N136 415 aa12.96□□□□□ -0.33
ACTN1-221ENST00000556571 FAM160A2Q8N612 972 aaPredicted RBP12.96□□□□□ -0.33
ACTN1-221ENST00000556571 NTPCRQ9BSD7 190 aaKnown RBP12.96□□□□□ -0.33
ACTN1-221ENST00000556571 FOXP1Q9H334 677 aaPredicted RBP12.96□□□□□ -0.33
ACTN1-221ENST00000556571 PLEKHA5Q9HAU0 1116 aa12.96□□□□□ -0.33
ACTN1-221ENST00000556571 OBP2AQ9NY56 170 aa12.96□□□□□ -0.33
ACTN1-221ENST00000556571 ASB3Q9Y575 518 aa12.96□□□□□ -0.33
ACTN1-221ENST00000556571 OR6C75A6NL08 312 aa12.95□□□□□ -0.34
ACTN1-221ENST00000556571 FGF19O95750 216 aa12.95□□□□□ -0.34
ACTN1-221ENST00000556571 LRPAP1P30533 357 aa12.95□□□□□ -0.34
ACTN1-221ENST00000556571 TRAPPC10P48553 1259 aa12.95□□□□□ -0.34
ACTN1-221ENST00000556571 LIMK1P53667 647 aa12.95□□□□□ -0.34
ACTN1-221ENST00000556571 STRN3Q13033 797 aa12.95□□□□□ -0.34
ACTN1-221ENST00000556571 DUSP4Q13115 394 aa12.95□□□□□ -0.34
ACTN1-221ENST00000556571 GPR17Q13304 367 aa12.95□□□□□ -0.34
ACTN1-221ENST00000556571 TXNDC11Q6PKC3 985 aa12.95□□□□□ -0.34
ACTN1-221ENST00000556571 C4orf32Q8N8J7 132 aa12.95□□□□□ -0.34
ACTN1-221ENST00000556571 SNX29Q8TEQ0 813 aa12.95□□□□□ -0.34
ACTN1-221ENST00000556571 LOXL4Q96JB6 756 aa12.95□□□□□ -0.34
ACTN1-221ENST00000556571 C8orf76Q96K31 380 aa12.95□□□□□ -0.34
ACTN1-221ENST00000556571 ZBTB45Q96K62 511 aaPredicted RBP12.95□□□□□ -0.34
ACTN1-221ENST00000556571 PGLYRP2Q96PD5 576 aa12.95□□□□□ -0.34
ACTN1-221ENST00000556571 RAB34Q9BZG1 259 aa12.95□□□□□ -0.34
ACTN1-221ENST00000556571 DNAJC25Q9H1X3 360 aa12.95□□□□□ -0.34
ACTN1-221ENST00000556571 TUBGCP4Q9UGJ1 667 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms