RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 B3GALT6Q96L58 329 aa10.46□□□□□ -0.73
SRP54-210ENST00000556380 MFSD14AQ96MC6 490 aa10.46□□□□□ -0.73
SRP54-210ENST00000556380 KLHL5Q96PQ7 755 aa10.46□□□□□ -0.73
SRP54-210ENST00000556380 TTPALQ9BTX7 342 aa10.46□□□□□ -0.73
SRP54-210ENST00000556380 PRKD2Q9BZL6 878 aa10.46□□□□□ -0.73
SRP54-210ENST00000556380 IGFLR1Q9H665 355 aa10.46□□□□□ -0.73
SRP54-210ENST00000556380 MRPL17Q9NRX2 175 aaKnown RBP10.46□□□□□ -0.73
SRP54-210ENST00000556380 RBAKQ9NYW8 714 aaPredicted RBP10.46□□□□□ -0.73
SRP54-210ENST00000556380 CLEC1BQ9P126 229 aa10.46□□□□□ -0.73
SRP54-210ENST00000556380 TRAF3IP3Q9Y228 551 aa10.46□□□□□ -0.73
SRP54-210ENST00000556380 SF3B1O75533 1304 aaKnown RBP eCLIP10.46□□□□□ -0.73
SRP54-210ENST00000556380 TDRD15B5MCY1 1934 aaKnown RBP10.46□□□□□ -0.74
SRP54-210ENST00000556380 CITO14578 2027 aa10.46□□□□□ -0.74
SRP54-210ENST00000556380 PTPRJQ12913 1337 aa10.45□□□□□ -0.74
SRP54-210ENST00000556380 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.45□□□□□ -0.74
SRP54-210ENST00000556380 I3L4J1 428 aa10.45□□□□□ -0.74
SRP54-210ENST00000556380 PPEF2O14830 753 aa10.45□□□□□ -0.74
SRP54-210ENST00000556380 XPOTO43592 962 aaKnown RBP10.45□□□□□ -0.74
SRP54-210ENST00000556380 TBC1D4O60343 1298 aa10.45□□□□□ -0.74
SRP54-210ENST00000556380 PRCPP42785 496 aa10.45□□□□□ -0.74
SRP54-210ENST00000556380 BRCC3P46736 316 aa10.45□□□□□ -0.74
SRP54-210ENST00000556380 CYP2J2P51589 502 aa10.45□□□□□ -0.74
SRP54-210ENST00000556380 MCCD1P59942 119 aaPredicted RBP10.45□□□□□ -0.74
SRP54-210ENST00000556380 CYP24A1Q07973 514 aa10.45□□□□□ -0.74
SRP54-210ENST00000556380 ELAVL2Q12926 359 aaKnown RBP10.45□□□□□ -0.74
SRP54-210ENST00000556380 MRPL58Q14197 206 aaKnown RBP10.45□□□□□ -0.74
SRP54-210ENST00000556380 BMS1Q14692 1282 aaKnown RBP10.45□□□□□ -0.74
SRP54-210ENST00000556380 SNRNP35Q16560 246 aaKnown RBP10.45□□□□□ -0.74
SRP54-210ENST00000556380 NFIL3Q16649 462 aa10.45□□□□□ -0.74
SRP54-210ENST00000556380 LEXMQ3ZCV2 418 aa10.45□□□□□ -0.74
SRP54-210ENST00000556380 ZNF658Q5TYW1 1059 aaPredicted RBP10.45□□□□□ -0.74
SRP54-210ENST00000556380 C9orf57Q5W0N0 161 aa10.45□□□□□ -0.74
SRP54-210ENST00000556380 SMYD5Q6GMV2 418 aa10.45□□□□□ -0.74
SRP54-210ENST00000556380 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.45□□□□□ -0.74
SRP54-210ENST00000556380 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.45□□□□□ -0.74
SRP54-210ENST00000556380 SMYD4Q8IYR2 804 aaPredicted RBP10.45□□□□□ -0.74
SRP54-210ENST00000556380 BEST2Q8NFU1 509 aa10.45□□□□□ -0.74
SRP54-210ENST00000556380 ATXN2LQ8WWM7 1075 aaKnown RBP10.45□□□□□ -0.74
SRP54-210ENST00000556380 PIK3R5Q8WYR1 880 aa10.45□□□□□ -0.74
SRP54-210ENST00000556380 SMARCE1Q969G3 411 aa10.45□□□□□ -0.74
SRP54-210ENST00000556380 BORCS6Q96GS4 357 aa10.45□□□□□ -0.74
SRP54-210ENST00000556380 FAM84AQ96KN4 292 aa10.45□□□□□ -0.74
SRP54-210ENST00000556380 SUSD3Q96L08 255 aa10.45□□□□□ -0.74
SRP54-210ENST00000556380 PDE11AQ9HCR9 933 aa10.45□□□□□ -0.74
SRP54-210ENST00000556380 RMND1Q9NWS8 449 aa10.45□□□□□ -0.74
SRP54-210ENST00000556380 DPP3Q9NY33 737 aa10.45□□□□□ -0.74
SRP54-210ENST00000556380 CLDND1Q9NY35 253 aa10.45□□□□□ -0.74
SRP54-210ENST00000556380 FNIP2Q9P278 1114 aa10.45□□□□□ -0.74
SRP54-210ENST00000556380 THEGQ9P2T0 379 aa10.45□□□□□ -0.74
SRP54-210ENST00000556380 HOOK1Q9UJC3 728 aaKnown RBP10.45□□□□□ -0.74
SRP54-210ENST00000556380 MAN1B1Q9UKM7 699 aa10.45□□□□□ -0.74
SRP54-210ENST00000556380 MAPK8IP1Q9UQF2 711 aa10.45□□□□□ -0.74
SRP54-210ENST00000556380 SSX2IPQ9Y2D8 614 aa10.45□□□□□ -0.74
SRP54-210ENST00000556380 PCDHB3Q9Y5E6 796 aa10.45□□□□□ -0.74
SRP54-210ENST00000556380 FSD2A1L4K1 749 aa10.44□□□□□ -0.74
SRP54-210ENST00000556380 M0QZQ0 153 aa10.44□□□□□ -0.74
SRP54-210ENST00000556380 C2CD2LO14523 706 aa10.44□□□□□ -0.74
SRP54-210ENST00000556380 SPTLC1O15269 473 aa10.44□□□□□ -0.74
SRP54-210ENST00000556380 TEX28O15482 410 aa10.44□□□□□ -0.74
SRP54-210ENST00000556380 ADAM12O43184 909 aa10.44□□□□□ -0.74
SRP54-210ENST00000556380 TRAPPC3O43617 180 aa10.44□□□□□ -0.74
SRP54-210ENST00000556380 TBX10O75333 385 aa10.44□□□□□ -0.74
SRP54-210ENST00000556380 C1RP00736 705 aa10.44□□□□□ -0.74
SRP54-210ENST00000556380 NR3C1P04150 777 aa10.44□□□□□ -0.74
SRP54-210ENST00000556380 URODP06132 367 aa10.44□□□□□ -0.74
SRP54-210ENST00000556380 KCNA5P22460 613 aa10.44□□□□□ -0.74
SRP54-210ENST00000556380 LILRA4P59901 499 aa10.44□□□□□ -0.74
SRP54-210ENST00000556380 CLDN10P78369 228 aa10.44□□□□□ -0.74
SRP54-210ENST00000556380 MORC3Q14149 939 aa10.44□□□□□ -0.74
SRP54-210ENST00000556380 PSMD6Q15008 389 aa10.44□□□□□ -0.74
SRP54-210ENST00000556380 CENPPQ6IPU0 288 aa10.44□□□□□ -0.74
SRP54-210ENST00000556380 LILRA6Q6PI73 481 aa10.44□□□□□ -0.74
SRP54-210ENST00000556380 RSPO2Q6UXX9 243 aaPredicted RBP10.44□□□□□ -0.74
SRP54-210ENST00000556380 ADSSL1Q8N142 457 aa10.44□□□□□ -0.74
SRP54-210ENST00000556380 C1orf127Q8N9H9 656 aa10.44□□□□□ -0.74
SRP54-210ENST00000556380 RDH13Q8NBN7 331 aa10.44□□□□□ -0.74
SRP54-210ENST00000556380 OR5B17Q8NGF7 314 aa10.44□□□□□ -0.74
SRP54-210ENST00000556380 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.44□□□□□ -0.74
SRP54-210ENST00000556380 PLEKHO2Q8TD55 490 aa10.44□□□□□ -0.74
SRP54-210ENST00000556380 RIN2Q8WYP3 895 aaPredicted RBP10.44□□□□□ -0.74
SRP54-210ENST00000556380 CLSTN3Q9BQT9 956 aa10.44□□□□□ -0.74
SRP54-210ENST00000556380 GTPBP4Q9BZE4 634 aaKnown RBP10.44□□□□□ -0.74
SRP54-210ENST00000556380 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.44□□□□□ -0.74
SRP54-210ENST00000556380 INTS13Q9NVM9 706 aa10.44□□□□□ -0.74
SRP54-210ENST00000556380 SIX4Q9UIU6 781 aa10.44□□□□□ -0.74
SRP54-210ENST00000556380 PDCD11Q14690 1871 aaKnown RBP10.43□□□□□ -0.74
SRP54-210ENST00000556380 H3BQ06 376 aaPredicted RBP10.43□□□□□ -0.74
SRP54-210ENST00000556380 SYN3O14994 580 aa10.43□□□□□ -0.74
SRP54-210ENST00000556380 EXOC3O60645 756 aa10.43□□□□□ -0.74
SRP54-210ENST00000556380 KIF20AO95235 890 aa10.43□□□□□ -0.74
SRP54-210ENST00000556380 BMP1P13497 986 aa10.43□□□□□ -0.74
SRP54-210ENST00000556380 PAX3P23760 479 aa10.43□□□□□ -0.74
SRP54-210ENST00000556380 TKTP29401 623 aaKnown RBP10.43□□□□□ -0.74
SRP54-210ENST00000556380 CASP4P49662 377 aa10.43□□□□□ -0.74
SRP54-210ENST00000556380 CLCN4P51793 760 aa10.43□□□□□ -0.74
SRP54-210ENST00000556380 MRPS5P82675 430 aaKnown RBP10.43□□□□□ -0.74
SRP54-210ENST00000556380 TFAMQ00059 246 aaKnown RBP10.43□□□□□ -0.74
SRP54-210ENST00000556380 SURF1Q15526 300 aa10.43□□□□□ -0.74
SRP54-210ENST00000556380 C1orf220Q5T0J3 134 aa10.43□□□□□ -0.74
SRP54-210ENST00000556380 KIAA1841Q6NSI8 718 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms