RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 C3orf36Q3SXR2 165 aa6.69□□□□□ -1.34
PRPF39-209ENST00000556353 SYCE2Q6PIF2 218 aa6.69□□□□□ -1.34
PRPF39-209ENST00000556353 PNMA8AQ86V59 439 aaPredicted RBP6.69□□□□□ -1.34
PRPF39-209ENST00000556353 Q8NA96 180 aa6.69□□□□□ -1.34
PRPF39-209ENST00000556353 IL17RDQ8NFM7 739 aa6.69□□□□□ -1.34
PRPF39-209ENST00000556353 VOPP1Q96AW1 172 aa6.69□□□□□ -1.34
PRPF39-209ENST00000556353 COA7Q96BR5 231 aa6.69□□□□□ -1.34
PRPF39-209ENST00000556353 CLPTM1LQ96KA5 538 aa6.69□□□□□ -1.34
PRPF39-209ENST00000556353 MRGPRX4Q96LA9 322 aa6.69□□□□□ -1.34
PRPF39-209ENST00000556353 TLR10Q9BXR5 811 aa6.69□□□□□ -1.34
PRPF39-209ENST00000556353 KIAA1586Q9HCI6 787 aa6.69□□□□□ -1.34
PRPF39-209ENST00000556353 ALG13Q9NP73 1137 aaKnown RBP6.69□□□□□ -1.34
PRPF39-209ENST00000556353 JKAMPQ9P055 326 aa6.69□□□□□ -1.34
PRPF39-209ENST00000556353 KAT6AQ92794 2004 aa6.69□□□□□ -1.34
PRPF39-209ENST00000556353 A0A1W2PS29 197 aa6.68□□□□□ -1.34
PRPF39-209ENST00000556353 ALG1L2C9J202 215 aa6.68□□□□□ -1.34
PRPF39-209ENST00000556353 GABRDO14764 452 aa6.68□□□□□ -1.34
PRPF39-209ENST00000556353 PEX1O43933 1283 aa6.68□□□□□ -1.34
PRPF39-209ENST00000556353 EDNRBP24530 442 aa6.68□□□□□ -1.34
PRPF39-209ENST00000556353 RARRES1P49788 294 aa6.68□□□□□ -1.34
PRPF39-209ENST00000556353 ZNF844Q08AG5 666 aa6.68□□□□□ -1.34
PRPF39-209ENST00000556353 FAM50AQ14320 339 aaKnown RBP6.68□□□□□ -1.34
PRPF39-209ENST00000556353 EFCAB2Q5VUJ9 269 aa6.68□□□□□ -1.34
PRPF39-209ENST00000556353 CLNKQ7Z7G1 428 aa6.68□□□□□ -1.34
PRPF39-209ENST00000556353 BOLLQ8N9W6 283 aaKnown RBP6.68□□□□□ -1.34
PRPF39-209ENST00000556353 KAT5Q92993 513 aa6.68□□□□□ -1.34
PRPF39-209ENST00000556353 CALCOCO1Q9P1Z2 691 aa6.68□□□□□ -1.34
PRPF39-209ENST00000556353 NEU2Q9Y3R4 380 aa6.68□□□□□ -1.34
PRPF39-209ENST00000556353 CADPSQ9ULU8 1353 aa6.68□□□□□ -1.34
PRPF39-209ENST00000556353 PRDM2Q13029 1718 aa6.67□□□□□ -1.34
PRPF39-209ENST00000556353 PRAMEF33A0A0G2JMD5 474 aa6.67□□□□□ -1.34
PRPF39-209ENST00000556353 FZD9O00144 591 aa6.67□□□□□ -1.34
PRPF39-209ENST00000556353 PRAMEF10O60809 474 aa6.67□□□□□ -1.34
PRPF39-209ENST00000556353 SLC43A1O75387 559 aa6.67□□□□□ -1.34
PRPF39-209ENST00000556353 KCNA2P16389 499 aa6.67□□□□□ -1.34
PRPF39-209ENST00000556353 AMPD3Q01432 767 aa6.67□□□□□ -1.34
PRPF39-209ENST00000556353 TLE1Q04724 770 aa6.67□□□□□ -1.34
PRPF39-209ENST00000556353 SF3B3Q15393 1217 aaKnown RBP6.67□□□□□ -1.34
PRPF39-209ENST00000556353 ZNF365Q70YC5 407 aa6.67□□□□□ -1.34
PRPF39-209ENST00000556353 AOPEPQ8N6M6 819 aa6.67□□□□□ -1.34
PRPF39-209ENST00000556353 PRPF38AQ8NAV1 312 aaKnown RBP6.67□□□□□ -1.34
PRPF39-209ENST00000556353 NTN5Q8WTR8 489 aaPredicted RBP6.67□□□□□ -1.34
PRPF39-209ENST00000556353 TMEM125Q96AQ2 219 aa6.67□□□□□ -1.34
PRPF39-209ENST00000556353 MAN1C1Q9NR34 630 aa6.67□□□□□ -1.34
PRPF39-209ENST00000556353 FOXJ2Q9P0K8 574 aa6.67□□□□□ -1.34
PRPF39-209ENST00000556353 PCDHB1Q9Y5F3 818 aa6.67□□□□□ -1.34
PRPF39-209ENST00000556353 C21orf58P58505 322 aa6.66□□□□□ -1.34
PRPF39-209ENST00000556353 RPS7P62081 194 aaKnown RBP6.66□□□□□ -1.34
PRPF39-209ENST00000556353 FPGSQ05932 587 aa6.66□□□□□ -1.34
PRPF39-209ENST00000556353 PTPN21Q16825 1174 aa6.66□□□□□ -1.34
PRPF39-209ENST00000556353 UAP1L1Q3KQV9 507 aa6.66□□□□□ -1.34
PRPF39-209ENST00000556353 FAM98AQ8NCA5 519 aaKnown RBP6.66□□□□□ -1.34
PRPF39-209ENST00000556353 PDLIM2Q96JY6 352 aa6.66□□□□□ -1.34
PRPF39-209ENST00000556353 KLHL32Q96NJ5 620 aa6.66□□□□□ -1.34
PRPF39-209ENST00000556353 HEPHQ9BQS7 1158 aa6.66□□□□□ -1.34
PRPF39-209ENST00000556353 INTS13Q9NVM9 706 aa6.66□□□□□ -1.34
PRPF39-209ENST00000556353 CFAP20Q9Y6A4 193 aaKnown RBP6.66□□□□□ -1.34
PRPF39-209ENST00000556353 WDR62O43379 1518 aa6.66□□□□□ -1.34
PRPF39-209ENST00000556353 MGST3O14880 152 aa6.65□□□□□ -1.34
PRPF39-209ENST00000556353 YY2O15391 372 aa6.65□□□□□ -1.34
PRPF39-209ENST00000556353 FOLR3P41439 243 aa6.65□□□□□ -1.34
PRPF39-209ENST00000556353 CACNA2D1P54289 1103 aa6.65□□□□□ -1.34
PRPF39-209ENST00000556353 ADKP55263 362 aaKnown RBP6.65□□□□□ -1.34
PRPF39-209ENST00000556353 PIGFQ07326 219 aa6.65□□□□□ -1.34
PRPF39-209ENST00000556353 FLYWCH1Q4VC44 716 aa6.65□□□□□ -1.34
PRPF39-209ENST00000556353 ZNF362Q5T0B9 420 aaPredicted RBP6.65□□□□□ -1.34
PRPF39-209ENST00000556353 TTC7BQ86TV6 843 aa6.65□□□□□ -1.34
PRPF39-209ENST00000556353 LRFN3Q9BTN0 628 aa6.65□□□□□ -1.34
PRPF39-209ENST00000556353 SPATA5L1Q9BVQ7 753 aa6.65□□□□□ -1.34
PRPF39-209ENST00000556353 IMPG2Q9BZV3 1241 aa6.65□□□□□ -1.34
PRPF39-209ENST00000556353 ADARB2Q9NS39 739 aaKnown RBP6.65□□□□□ -1.34
PRPF39-209ENST00000556353 SERPINB13Q9UIV8 391 aa6.65□□□□□ -1.34
PRPF39-209ENST00000556353 CCDC195A0A1B0GUA6 201 aa6.64□□□□□ -1.35
PRPF39-209ENST00000556353 ANXA1P04083 346 aa6.64□□□□□ -1.35
PRPF39-209ENST00000556353 SRGNP10124 158 aa6.64□□□□□ -1.35
PRPF39-209ENST00000556353 CCND1P24385 295 aa6.64□□□□□ -1.35
PRPF39-209ENST00000556353 PREPLQ4J6C6 727 aaPredicted RBP6.64□□□□□ -1.35
PRPF39-209ENST00000556353 SLC17A8Q8NDX2 589 aa6.64□□□□□ -1.35
PRPF39-209ENST00000556353 NSUN6Q8TEA1 469 aaKnown RBP6.64□□□□□ -1.35
PRPF39-209ENST00000556353 DMRTA2Q96SC8 542 aa6.64□□□□□ -1.35
PRPF39-209ENST00000556353 SLC13A1Q9BZW2 595 aa6.64□□□□□ -1.35
PRPF39-209ENST00000556353 CTTNBP2NLQ9P2B4 639 aa6.64□□□□□ -1.35
PRPF39-209ENST00000556353 SLC45A2Q9UMX9 530 aa6.64□□□□□ -1.35
PRPF39-209ENST00000556353 TOR1BO14657 336 aa6.63□□□□□ -1.35
PRPF39-209ENST00000556353 ORC4O43929 436 aa6.63□□□□□ -1.35
PRPF39-209ENST00000556353 C1RP00736 705 aa6.63□□□□□ -1.35
PRPF39-209ENST00000556353 IGLV2-14P01704 120 aa6.63□□□□□ -1.35
PRPF39-209ENST00000556353 GATA3P23771 443 aa6.63□□□□□ -1.35
PRPF39-209ENST00000556353 ANXA11P50995 505 aaKnown RBP6.63□□□□□ -1.35
PRPF39-209ENST00000556353 EVA1CP58658 441 aa6.63□□□□□ -1.35
PRPF39-209ENST00000556353 DYRK1AQ13627 763 aa6.63□□□□□ -1.35
PRPF39-209ENST00000556353 CD300EQ496F6 205 aaPredicted RBP6.63□□□□□ -1.35
PRPF39-209ENST00000556353 VWA1Q6PCB0 445 aa6.63□□□□□ -1.35
PRPF39-209ENST00000556353 CFAP52Q8N1V2 620 aa6.63□□□□□ -1.35
PRPF39-209ENST00000556353 PDPRQ8NCN5 879 aa6.63□□□□□ -1.35
PRPF39-209ENST00000556353 TMIEQ8NEW7 156 aa6.63□□□□□ -1.35
PRPF39-209ENST00000556353 VRK1Q99986 396 aaPredicted RBP6.63□□□□□ -1.35
PRPF39-209ENST00000556353 SEMA4GQ9NTN9 838 aa6.63□□□□□ -1.35
PRPF39-209ENST00000556353 VSX1Q9NZR4 365 aaPredicted RBP6.63□□□□□ -1.35
PRPF39-209ENST00000556353 SLC17A6Q9P2U8 582 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms