RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 EXTL3O43909 919 aa12.5□□□□□ -0.41
SLIRP-205ENST00000556310 PAPLNO95428 1278 aa12.5□□□□□ -0.41
SLIRP-205ENST00000556310 PAX3P23760 479 aa12.5□□□□□ -0.41
SLIRP-205ENST00000556310 GUCY2FP51841 1108 aa12.5□□□□□ -0.41
SLIRP-205ENST00000556310 VARS2Q5ST30 1063 aaKnown RBP12.5□□□□□ -0.41
SLIRP-205ENST00000556310 TMC5Q6UXY8 1006 aa12.5□□□□□ -0.41
SLIRP-205ENST00000556310 CYP26C1Q6V0L0 522 aa12.5□□□□□ -0.41
SLIRP-205ENST00000556310 GPR149Q86SP6 731 aa12.5□□□□□ -0.41
SLIRP-205ENST00000556310 PALB2Q86YC2 1186 aa12.5□□□□□ -0.41
SLIRP-205ENST00000556310 NT5DC4Q86YG4 428 aa12.5□□□□□ -0.41
SLIRP-205ENST00000556310 EFCAB13Q8IY85 973 aa12.5□□□□□ -0.41
SLIRP-205ENST00000556310 GPD1LQ8N335 351 aa12.5□□□□□ -0.41
SLIRP-205ENST00000556310 TMEM130Q8N3G9 435 aa12.5□□□□□ -0.41
SLIRP-205ENST00000556310 SCFD1Q8WVM8 642 aa12.5□□□□□ -0.41
SLIRP-205ENST00000556310 RHOBTB2Q9BYZ6 727 aa12.5□□□□□ -0.41
SLIRP-205ENST00000556310 POMKQ9H5K3 350 aa12.5□□□□□ -0.41
SLIRP-205ENST00000556310 ZDHHC7Q9NXF8 308 aa12.5□□□□□ -0.41
SLIRP-205ENST00000556310 RBAKQ9NYW8 714 aaPredicted RBP12.5□□□□□ -0.41
SLIRP-205ENST00000556310 H7C4K7 107 aa12.49□□□□□ -0.41
SLIRP-205ENST00000556310 M0QZQ0 153 aa12.49□□□□□ -0.41
SLIRP-205ENST00000556310 ADAM12O43184 909 aa12.49□□□□□ -0.41
SLIRP-205ENST00000556310 SNRPFP62306 86 aaKnown RBP12.49□□□□□ -0.41
SLIRP-205ENST00000556310 RAB33AQ14088 237 aa12.49□□□□□ -0.41
SLIRP-205ENST00000556310 ATAT1Q5SQI0 421 aa12.49□□□□□ -0.41
SLIRP-205ENST00000556310 LIN9Q5TKA1 542 aa12.49□□□□□ -0.41
SLIRP-205ENST00000556310 C9orf57Q5W0N0 161 aa12.49□□□□□ -0.41
SLIRP-205ENST00000556310 SLC8B1Q6J4K2 584 aa12.49□□□□□ -0.41
SLIRP-205ENST00000556310 KANK3Q6NY19 840 aa12.49□□□□□ -0.41
SLIRP-205ENST00000556310 KRBA2Q6ZNG9 492 aa12.49□□□□□ -0.41
SLIRP-205ENST00000556310 HS2ST1Q7LGA3 356 aa12.49□□□□□ -0.41
SLIRP-205ENST00000556310 ZNF454Q8N9F8 522 aa12.49□□□□□ -0.41
SLIRP-205ENST00000556310 KREMEN2Q8NCW0 462 aa12.49□□□□□ -0.41
SLIRP-205ENST00000556310 ZSWIM2Q8NEG5 633 aa12.49□□□□□ -0.41
SLIRP-205ENST00000556310 APPL2Q8NEU8 664 aa12.49□□□□□ -0.41
SLIRP-205ENST00000556310 EPAS1Q99814 870 aa12.49□□□□□ -0.41
SLIRP-205ENST00000556310 PCIF1Q9H4Z3 704 aa12.49□□□□□ -0.41
SLIRP-205ENST00000556310 SLC39A2Q9NP94 309 aa12.49□□□□□ -0.41
SLIRP-205ENST00000556310 AGPAT3Q9NRZ7 376 aa12.49□□□□□ -0.41
SLIRP-205ENST00000556310 HSPBP1Q9NZL4 362 aa12.49□□□□□ -0.41
SLIRP-205ENST00000556310 NR2E1Q9Y466 385 aa12.49□□□□□ -0.41
SLIRP-205ENST00000556310 PCDHGA10Q9Y5H3 936 aa12.49□□□□□ -0.41
SLIRP-205ENST00000556310 CDY1Q9Y6F8 540 aa12.49□□□□□ -0.41
SLIRP-205ENST00000556310 ANO9A1A5B4 782 aa12.48□□□□□ -0.41
SLIRP-205ENST00000556310 GOLGA8IPA6NC78 632 aa12.48□□□□□ -0.41
SLIRP-205ENST00000556310 GOLGA8JA6NMD2 632 aa12.48□□□□□ -0.41
SLIRP-205ENST00000556310 PIRO00625 290 aa12.48□□□□□ -0.41
SLIRP-205ENST00000556310 PPEF2O14830 753 aa12.48□□□□□ -0.41
SLIRP-205ENST00000556310 TGFB1I1O43294 461 aa12.48□□□□□ -0.41
SLIRP-205ENST00000556310 TBC1D4O60343 1298 aa12.48□□□□□ -0.41
SLIRP-205ENST00000556310 RFPL2O75678 378 aa12.48□□□□□ -0.41
SLIRP-205ENST00000556310 ZMYND10O75800 440 aa12.48□□□□□ -0.41
SLIRP-205ENST00000556310 WEE2P0C1S8 567 aa12.48□□□□□ -0.41
SLIRP-205ENST00000556310 SPATA31D3P0C874 917 aa12.48□□□□□ -0.41
SLIRP-205ENST00000556310 HOXB1P14653 301 aaPredicted RBP12.48□□□□□ -0.41
SLIRP-205ENST00000556310 OR1D2P34982 312 aa12.48□□□□□ -0.41
SLIRP-205ENST00000556310 WNT7BP56706 349 aa12.48□□□□□ -0.41
SLIRP-205ENST00000556310 PSMD2Q13200 908 aa12.48□□□□□ -0.41
SLIRP-205ENST00000556310 MRPL58Q14197 206 aaKnown RBP12.48□□□□□ -0.41
SLIRP-205ENST00000556310 KMT5BQ4FZB7 885 aa12.48□□□□□ -0.41
SLIRP-205ENST00000556310 ZNF280DQ6N043 979 aa12.48□□□□□ -0.41
SLIRP-205ENST00000556310 RSPO2Q6UXX9 243 aaPredicted RBP12.48□□□□□ -0.41
SLIRP-205ENST00000556310 SPATA31D4Q6ZUB0 917 aa12.48□□□□□ -0.41
SLIRP-205ENST00000556310 NELFCDQ8IXH7 590 aa12.48□□□□□ -0.41
SLIRP-205ENST00000556310 KIAA0895Q8NCT3 520 aa12.48□□□□□ -0.41
SLIRP-205ENST00000556310 FEZF2Q8TBJ5 459 aa12.48□□□□□ -0.41
SLIRP-205ENST00000556310 CCDC34Q96HJ3 373 aa12.48□□□□□ -0.41
SLIRP-205ENST00000556310 RPGRIP1Q96KN7 1286 aa12.48□□□□□ -0.41
SLIRP-205ENST00000556310 KIAA1586Q9HCI6 787 aa12.48□□□□□ -0.41
SLIRP-205ENST00000556310 DPP3Q9NY33 737 aa12.48□□□□□ -0.41
SLIRP-205ENST00000556310 CGNQ9P2M7 1197 aaKnown RBP12.48□□□□□ -0.41
SLIRP-205ENST00000556310 TRIOO75962 3097 aa12.48□□□□□ -0.41
SLIRP-205ENST00000556310 DOCK8Q8NF50 2099 aa12.47□□□□□ -0.41
SLIRP-205ENST00000556310 CCDC195A0A1B0GUA6 201 aa12.47□□□□□ -0.41
SLIRP-205ENST00000556310 ARHGEF37A1IGU5 675 aa12.47□□□□□ -0.41
SLIRP-205ENST00000556310 GOLGA6L4A6NEF3 574 aa12.47□□□□□ -0.41
SLIRP-205ENST00000556310 ZNF233A6NK53 670 aa12.47□□□□□ -0.41
SLIRP-205ENST00000556310 ZNF202O95125 648 aa12.47□□□□□ -0.41
SLIRP-205ENST00000556310 RPN1P04843 607 aaKnown RBP12.47□□□□□ -0.41
SLIRP-205ENST00000556310 C8AP07357 584 aa12.47□□□□□ -0.41
SLIRP-205ENST00000556310 HNRNPA1P09651 372 aaKnown RBP eCLIP12.47□□□□□ -0.41
SLIRP-205ENST00000556310 ODC1P11926 461 aa12.47□□□□□ -0.41
SLIRP-205ENST00000556310 TYMPP19971 482 aa12.47□□□□□ -0.41
SLIRP-205ENST00000556310 HOXA9P31269 272 aa12.47□□□□□ -0.41
SLIRP-205ENST00000556310 LILRA4P59901 499 aa12.47□□□□□ -0.41
SLIRP-205ENST00000556310 TFAMQ00059 246 aaKnown RBP12.47□□□□□ -0.41
SLIRP-205ENST00000556310 ROR1Q01973 937 aa12.47□□□□□ -0.41
SLIRP-205ENST00000556310 YWHAHQ04917 246 aaPredicted RBP12.47□□□□□ -0.41
SLIRP-205ENST00000556310 DPYDQ12882 1025 aa12.47□□□□□ -0.41
SLIRP-205ENST00000556310 STK4Q13043 487 aa12.47□□□□□ -0.41
SLIRP-205ENST00000556310 KNOP1Q1ED39 458 aaKnown RBP12.47□□□□□ -0.41
SLIRP-205ENST00000556310 CTXN3Q4LDR2 81 aa12.47□□□□□ -0.41
SLIRP-205ENST00000556310 DSTYKQ6XUX3 929 aa12.47□□□□□ -0.41
SLIRP-205ENST00000556310 CCDC149Q6ZUS6 474 aa12.47□□□□□ -0.41
SLIRP-205ENST00000556310 RTL10Q7L3V2 364 aa12.47□□□□□ -0.41
SLIRP-205ENST00000556310 RNF135Q8IUD6 432 aa12.47□□□□□ -0.41
SLIRP-205ENST00000556310 C12orf56Q8IXR9 622 aa12.47□□□□□ -0.41
SLIRP-205ENST00000556310 GOLGA5Q8TBA6 731 aa12.47□□□□□ -0.41
SLIRP-205ENST00000556310 NOC3LQ8WTT2 800 aaKnown RBP12.47□□□□□ -0.41
SLIRP-205ENST00000556310 SMG7Q92540 1137 aaKnown RBP12.47□□□□□ -0.41
SLIRP-205ENST00000556310 CCDC47Q96A33 483 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms