RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 NRP1O14786 923 aa7.72□□□□□ -1.17
ATXN3-236ENST00000556220 DHX15O43143 795 aaKnown RBP7.72□□□□□ -1.17
ATXN3-236ENST00000556220 B4GALT3O60512 393 aa7.72□□□□□ -1.17
ATXN3-236ENST00000556220 FOXD2O60548 495 aaPredicted RBP7.72□□□□□ -1.17
ATXN3-236ENST00000556220 ZNF623O75123 536 aa7.72□□□□□ -1.17
ATXN3-236ENST00000556220 CSDE1O75534 798 aaKnown RBP7.72□□□□□ -1.17
ATXN3-236ENST00000556220 DDHD2O94830 711 aa7.72□□□□□ -1.17
ATXN3-236ENST00000556220 URODP06132 367 aa7.72□□□□□ -1.17
ATXN3-236ENST00000556220 SPATA31D3P0C874 917 aa7.72□□□□□ -1.17
ATXN3-236ENST00000556220 TRDNQ13061 729 aa7.72□□□□□ -1.17
ATXN3-236ENST00000556220 MTAPQ13126 283 aa7.72□□□□□ -1.17
ATXN3-236ENST00000556220 UVSSAQ2YD98 709 aa7.72□□□□□ -1.17
ATXN3-236ENST00000556220 IL31Q6EBC2 164 aa7.72□□□□□ -1.17
ATXN3-236ENST00000556220 LILRA6Q6PI73 481 aa7.72□□□□□ -1.17
ATXN3-236ENST00000556220 ZNF852Q6ZMS4 543 aa7.72□□□□□ -1.17
ATXN3-236ENST00000556220 SPATA31D4Q6ZUB0 917 aa7.72□□□□□ -1.17
ATXN3-236ENST00000556220 MTSS1LQ765P7 747 aa7.72□□□□□ -1.17
ATXN3-236ENST00000556220 TRMT1LQ7Z2T5 733 aaKnown RBP7.72□□□□□ -1.17
ATXN3-236ENST00000556220 ZNF438Q7Z4V0 828 aa7.72□□□□□ -1.17
ATXN3-236ENST00000556220 LRRC71Q8N4P6 559 aa7.72□□□□□ -1.17
ATXN3-236ENST00000556220 SRBD1Q8N5C6 995 aaKnown RBP7.72□□□□□ -1.17
ATXN3-236ENST00000556220 TMEM175Q9BSA9 504 aa7.72□□□□□ -1.17
ATXN3-236ENST00000556220 HERC2P3Q9BVR0 1158 aa7.72□□□□□ -1.17
ATXN3-236ENST00000556220 KRTAP9-2Q9BYQ4 174 aa7.72□□□□□ -1.17
ATXN3-236ENST00000556220 TMEM63CQ9P1W3 806 aa7.72□□□□□ -1.17
ATXN3-236ENST00000556220 SEPT3Q9UH03 358 aa7.72□□□□□ -1.17
ATXN3-236ENST00000556220 EVPLQ92817 2033 aa7.72□□□□□ -1.17
ATXN3-236ENST00000556220 SETXQ7Z333 2677 aaKnown RBP7.71□□□□□ -1.17
ATXN3-236ENST00000556220 TGM5O43548 720 aa7.71□□□□□ -1.18
ATXN3-236ENST00000556220 PCSK2P16519 638 aa7.71□□□□□ -1.18
ATXN3-236ENST00000556220 GNAQP50148 359 aa7.71□□□□□ -1.18
ATXN3-236ENST00000556220 LIMK1P53667 647 aa7.71□□□□□ -1.18
ATXN3-236ENST00000556220 CDC42EP1Q00587 391 aa7.71□□□□□ -1.18
ATXN3-236ENST00000556220 DSG1Q02413 1049 aa7.71□□□□□ -1.18
ATXN3-236ENST00000556220 ADCY1Q08828 1119 aa7.71□□□□□ -1.18
ATXN3-236ENST00000556220 SART3Q15020 963 aaKnown RBP7.71□□□□□ -1.18
ATXN3-236ENST00000556220 TWF2Q6IBS0 349 aaKnown RBP7.71□□□□□ -1.18
ATXN3-236ENST00000556220 TXNDC11Q6PKC3 985 aa7.71□□□□□ -1.18
ATXN3-236ENST00000556220 PRR23BQ6ZRT6 265 aa7.71□□□□□ -1.18
ATXN3-236ENST00000556220 TPRG1Q6ZUI0 275 aa7.71□□□□□ -1.18
ATXN3-236ENST00000556220 ACAD11Q709F0 780 aa7.71□□□□□ -1.18
ATXN3-236ENST00000556220 PALB2Q86YC2 1186 aa7.71□□□□□ -1.18
ATXN3-236ENST00000556220 RNF168Q8IYW5 571 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-236ENST00000556220 CTCFLQ8NI51 663 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-236ENST00000556220 URGCPQ8TCY9 931 aa7.71□□□□□ -1.18
ATXN3-236ENST00000556220 IGDCC4Q8TDY8 1250 aa7.71□□□□□ -1.18
ATXN3-236ENST00000556220 MAP4K1Q92918 833 aa7.71□□□□□ -1.18
ATXN3-236ENST00000556220 PGBD4Q96DM1 585 aa7.71□□□□□ -1.18
ATXN3-236ENST00000556220 SCLT1Q96NL6 688 aa7.71□□□□□ -1.18
ATXN3-236ENST00000556220 FAM193BQ96PV7 902 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-236ENST00000556220 GCOM2Q9BZD3 368 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-236ENST00000556220 LY9Q9HBG7 655 aa7.71□□□□□ -1.18
ATXN3-236ENST00000556220 FAM105AQ9NUU6 356 aa7.71□□□□□ -1.18
ATXN3-236ENST00000556220 KANSL3Q9P2N6 904 aa7.71□□□□□ -1.18
ATXN3-236ENST00000556220 STOML1Q9UBI4 398 aa7.71□□□□□ -1.18
ATXN3-236ENST00000556220 RCAN3Q9UKA8 241 aa7.71□□□□□ -1.18
ATXN3-236ENST00000556220 MRPS17Q9Y2R5 130 aaKnown RBP7.71□□□□□ -1.18
ATXN3-236ENST00000556220 C2orf16Q68DN1 1984 aa7.71□□□□□ -1.18
ATXN3-236ENST00000556220 SHISA7A6NL88 538 aa7.7□□□□□ -1.18
ATXN3-236ENST00000556220 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.7□□□□□ -1.18
ATXN3-236ENST00000556220 WISP1O95388 367 aa7.7□□□□□ -1.18
ATXN3-236ENST00000556220 EFEMP2O95967 443 aa7.7□□□□□ -1.18
ATXN3-236ENST00000556220 FOSP01100 380 aaPredicted RBP7.7□□□□□ -1.18
ATXN3-236ENST00000556220 C1QTNF9P0C862 333 aa7.7□□□□□ -1.18
ATXN3-236ENST00000556220 EPHA1P21709 976 aa7.7□□□□□ -1.18
ATXN3-236ENST00000556220 ZNF76P36508 570 aa7.7□□□□□ -1.18
ATXN3-236ENST00000556220 GLUD2P49448 558 aa7.7□□□□□ -1.18
ATXN3-236ENST00000556220 RAB27AP51159 221 aa7.7□□□□□ -1.18
ATXN3-236ENST00000556220 SIM2Q14190 667 aaPredicted RBP7.7□□□□□ -1.18
ATXN3-236ENST00000556220 PPP2R5DQ14738 602 aa7.7□□□□□ -1.18
ATXN3-236ENST00000556220 DUOXA2Q1HG44 320 aa7.7□□□□□ -1.18
ATXN3-236ENST00000556220 ZNF746Q6NUN9 644 aaPredicted RBP7.7□□□□□ -1.18
ATXN3-236ENST00000556220 LRSAM1Q6UWE0 723 aa7.7□□□□□ -1.18
ATXN3-236ENST00000556220 ADAMTSL4Q6UY14 1074 aa7.7□□□□□ -1.18
ATXN3-236ENST00000556220 AGMOQ6ZNB7 445 aa7.7□□□□□ -1.18
ATXN3-236ENST00000556220 NIPA1Q7RTP0 329 aa7.7□□□□□ -1.18
ATXN3-236ENST00000556220 GRASPQ7Z6J2 395 aaPredicted RBP7.7□□□□□ -1.18
ATXN3-236ENST00000556220 MRPL10Q7Z7H8 261 aaKnown RBP7.7□□□□□ -1.18
ATXN3-236ENST00000556220 FGF13Q92913 245 aa7.7□□□□□ -1.18
ATXN3-236ENST00000556220 PMEPA1Q969W9 287 aa7.7□□□□□ -1.18
ATXN3-236ENST00000556220 FAM167AQ96KS9 214 aa7.7□□□□□ -1.18
ATXN3-236ENST00000556220 CHRDQ9H2X0 955 aa7.7□□□□□ -1.18
ATXN3-236ENST00000556220 CHST7Q9NS84 486 aa7.7□□□□□ -1.18
ATXN3-236ENST00000556220 DIAPH3Q9NSV4 1193 aa7.7□□□□□ -1.18
ATXN3-236ENST00000556220 NRBP2Q9NSY0 501 aa7.7□□□□□ -1.18
ATXN3-236ENST00000556220 PCMTD2Q9NV79 361 aa7.7□□□□□ -1.18
ATXN3-236ENST00000556220 MARCH5Q9NX47 278 aa7.7□□□□□ -1.18
ATXN3-236ENST00000556220 KCNK4Q9NYG8 393 aa7.7□□□□□ -1.18
ATXN3-236ENST00000556220 CNTN3Q9P232 1028 aa7.7□□□□□ -1.18
ATXN3-236ENST00000556220 GABBR1Q9UBS5 961 aa7.7□□□□□ -1.18
ATXN3-236ENST00000556220 SALL4Q9UJQ4 1053 aa7.7□□□□□ -1.18
ATXN3-236ENST00000556220 PCDHA10Q9Y5I2 948 aa7.7□□□□□ -1.18
ATXN3-236ENST00000556220 WDFY3Q8IZQ1 3526 aa7.69□□□□□ -1.18
ATXN3-236ENST00000556220 ASXL3Q9C0F0 2248 aa7.69□□□□□ -1.18
ATXN3-236ENST00000556220 hCG_1642624A0A1W2PR95 340 aa7.69□□□□□ -1.18
ATXN3-236ENST00000556220 FAM86B1E9PN63 330 aa7.69□□□□□ -1.18
ATXN3-236ENST00000556220 HIP1O00291 1037 aa7.69□□□□□ -1.18
ATXN3-236ENST00000556220 DDAH1O94760 285 aa7.69□□□□□ -1.18
ATXN3-236ENST00000556220 PLEKHA8P1O95397 391 aa7.69□□□□□ -1.18
ATXN3-236ENST00000556220 IGLV1-40P01703 118 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms