RNA–Protein interactions for RNA: ENST00000556210.1

CUX1-215, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-215ENST00000556210 FAM47CQ5HY64 1035 aa15.71■□□□□ 0.1
CUX1-215ENST00000556210 GLRA4Q5JXX5 417 aa15.71■□□□□ 0.1
CUX1-215ENST00000556210 FBXO16Q8IX29 292 aaPredicted RBP15.71■□□□□ 0.1
CUX1-215ENST00000556210 CEP120Q8N960 986 aa15.71■□□□□ 0.1
CUX1-215ENST00000556210 TPX2Q9ULW0 747 aaKnown RBP15.71■□□□□ 0.1
CUX1-215ENST00000556210 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.71■□□□□ 0.1
CUX1-215ENST00000556210 SCINQ9Y6U3 715 aa15.71■□□□□ 0.1
CUX1-215ENST00000556210 E2F8A0AVK6 867 aa15.7■□□□□ 0.1
CUX1-215ENST00000556210 CST8O60676 142 aa15.7■□□□□ 0.1
CUX1-215ENST00000556210 LDHAP00338 332 aaKnown RBP15.7■□□□□ 0.1
CUX1-215ENST00000556210 INHBAP08476 426 aa15.7■□□□□ 0.1
CUX1-215ENST00000556210 TNFSF9P41273 254 aa15.7■□□□□ 0.1
CUX1-215ENST00000556210 RPL7AP62424 266 aaKnown RBP15.7■□□□□ 0.1
CUX1-215ENST00000556210 ANKRD20A8PQ5CZ79 823 aa15.7■□□□□ 0.1
CUX1-215ENST00000556210 ANKRD20A3Q5VUR7 823 aa15.7■□□□□ 0.1
CUX1-215ENST00000556210 SCYL3Q8IZE3 742 aa15.7■□□□□ 0.1
CUX1-215ENST00000556210 MRPL4Q9BYD3 311 aaKnown RBP15.7■□□□□ 0.1
CUX1-215ENST00000556210 PPP1R12CQ9BZL4 782 aa15.7■□□□□ 0.1
CUX1-215ENST00000556210 NEU2Q9Y3R4 380 aa15.7■□□□□ 0.1
CUX1-215ENST00000556210 F8VP50 259 aa15.7■□□□□ 0.1
CUX1-215ENST00000556210 MCF2LO15068 1137 aa15.7■□□□□ 0.1
CUX1-215ENST00000556210 EXTL3O43909 919 aa15.7■□□□□ 0.1
CUX1-215ENST00000556210 OATP04181 439 aa15.7■□□□□ 0.1
CUX1-215ENST00000556210 MSH2P43246 934 aa15.7■□□□□ 0.1
CUX1-215ENST00000556210 DNAJC3Q13217 504 aa15.7■□□□□ 0.1
CUX1-215ENST00000556210 RCN2Q14257 317 aa15.7■□□□□ 0.1
CUX1-215ENST00000556210 ARHGEF18Q6ZSZ5 1173 aa15.7■□□□□ 0.1
CUX1-215ENST00000556210 NOD2Q9HC29 1040 aa15.7■□□□□ 0.1
CUX1-215ENST00000556210 PARVAQ9NVD7 372 aa15.7■□□□□ 0.1
CUX1-215ENST00000556210 NOP53Q9NZM5 478 aaKnown RBP15.7■□□□□ 0.1
CUX1-215ENST00000556210 C4AP0C0L4 1744 aa15.7■□□□□ 0.1
CUX1-215ENST00000556210 C4BP0C0L5 1744 aa15.7■□□□□ 0.1
CUX1-215ENST00000556210 PDGFRBP09619 1106 aa15.7■□□□□ 0.1
CUX1-215ENST00000556210 KITP10721 976 aa15.7■□□□□ 0.1
CUX1-215ENST00000556210 CDH6P55285 790 aa15.7■□□□□ 0.1
CUX1-215ENST00000556210 SARNPP82979 210 aaKnown RBP15.7■□□□□ 0.1
CUX1-215ENST00000556210 PLCB4Q15147 1175 aa15.7■□□□□ 0.1
CUX1-215ENST00000556210 FYB2Q5VWT5 728 aa15.7■□□□□ 0.1
CUX1-215ENST00000556210 P3H4Q92791 437 aa15.7■□□□□ 0.1
CUX1-215ENST00000556210 COPS5Q92905 334 aa15.7■□□□□ 0.1
CUX1-215ENST00000556210 SLC13A1Q9BZW2 595 aa15.7■□□□□ 0.1
CUX1-215ENST00000556210 AGAP1Q9UPQ3 857 aa15.7■□□□□ 0.1
CUX1-215ENST00000556210 MRPL42Q9Y6G3 142 aaKnown RBP15.7■□□□□ 0.1
CUX1-215ENST00000556210 N4BP2Q86UW6 1770 aaPredicted RBP15.7■□□□□ 0.1
CUX1-215ENST00000556210 TRAPPC3O43617 180 aa15.69■□□□□ 0.1
CUX1-215ENST00000556210 KIF1CO43896 1103 aaKnown RBP15.69■□□□□ 0.1
CUX1-215ENST00000556210 QPCTQ16769 361 aa15.69■□□□□ 0.1
CUX1-215ENST00000556210 CFAP57Q96MR6 1250 aa15.69■□□□□ 0.1
CUX1-215ENST00000556210 FAM167BQ9BTA0 163 aa15.69■□□□□ 0.1
CUX1-215ENST00000556210 KIAA1683Q9H0B3 1180 aa15.69■□□□□ 0.1
CUX1-215ENST00000556210 PRPSAP2O60256 369 aa15.69■□□□□ 0.1
CUX1-215ENST00000556210 MAN1A1P33908 653 aa15.69■□□□□ 0.1
CUX1-215ENST00000556210 MCOLN2Q8IZK6 566 aa15.69■□□□□ 0.1
CUX1-215ENST00000556210 PLEKHO2Q8TD55 490 aa15.69■□□□□ 0.1
CUX1-215ENST00000556210 SEPT1Q8WYJ6 367 aa15.69■□□□□ 0.1
CUX1-215ENST00000556210 KIAA1586Q9HCI6 787 aa15.69■□□□□ 0.1
CUX1-215ENST00000556210 KCNG1Q9UIX4 513 aa15.69■□□□□ 0.1
CUX1-215ENST00000556210 A0A0A6YYK5 440 aaPredicted RBP15.69■□□□□ 0.1
CUX1-215ENST00000556210 CCDC195A0A1B0GUA6 201 aa15.69■□□□□ 0.1
CUX1-215ENST00000556210 O00370 1275 aa15.69■□□□□ 0.1
CUX1-215ENST00000556210 KIAA0391O15091 583 aaKnown RBP15.69■□□□□ 0.1
CUX1-215ENST00000556210 BANF1O75531 89 aa15.69■□□□□ 0.1
CUX1-215ENST00000556210 TNFRSF8P28908 595 aa15.69■□□□□ 0.1
CUX1-215ENST00000556210 GBP1P32455 592 aa15.69■□□□□ 0.1
CUX1-215ENST00000556210 HIRAP54198 1017 aaPredicted RBP15.69■□□□□ 0.1
CUX1-215ENST00000556210 TMEM132BQ14DG7 1078 aa15.69■□□□□ 0.1
CUX1-215ENST00000556210 BMT2Q1RMZ1 405 aa15.69■□□□□ 0.1
CUX1-215ENST00000556210 FAM83AQ86UY5 434 aa15.69■□□□□ 0.1
CUX1-215ENST00000556210 VSIG10LQ86VR7 867 aa15.69■□□□□ 0.1
CUX1-215ENST00000556210 PDIK1LQ8N165 341 aa15.69■□□□□ 0.1
CUX1-215ENST00000556210 VPS52Q8N1B4 723 aa15.69■□□□□ 0.1
CUX1-215ENST00000556210 CCDC110Q8TBZ0 833 aa15.69■□□□□ 0.1
CUX1-215ENST00000556210 UMODL1Q5DID0 1318 aa15.69■□□□□ 0.1
CUX1-215ENST00000556210 CACNA1SQ13698 1873 aa15.68■□□□□ 0.1
CUX1-215ENST00000556210 CCDC78A2IDD5 438 aa15.68■□□□□ 0.1
CUX1-215ENST00000556210 DDNO94850 711 aaPredicted RBP15.68■□□□□ 0.1
CUX1-215ENST00000556210 ADSSP30520 456 aa15.68■□□□□ 0.1
CUX1-215ENST00000556210 NFX1Q12986 1120 aaKnown RBP15.68■□□□□ 0.1
CUX1-215ENST00000556210 TTC27Q6P3X3 843 aa15.68■□□□□ 0.1
CUX1-215ENST00000556210 CENPUQ71F23 418 aa15.68■□□□□ 0.1
CUX1-215ENST00000556210 PPM1NQ8N819 430 aa15.68■□□□□ 0.1
CUX1-215ENST00000556210 ASAP3Q8TDY4 903 aa15.68■□□□□ 0.1
CUX1-215ENST00000556210 SENP7Q9BQF6 1050 aa15.68■□□□□ 0.1
CUX1-215ENST00000556210 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.68■□□□□ 0.1
CUX1-215ENST00000556210 GPATCH2LQ9NWQ4 482 aa15.68■□□□□ 0.1
CUX1-215ENST00000556210 PLIN4Q96Q06 1357 aa15.68■□□□□ 0.1
CUX1-215ENST00000556210 DIAPH2O60879 1101 aa15.68■□□□□ 0.1
CUX1-215ENST00000556210 ANXA13P27216 316 aa15.68■□□□□ 0.1
CUX1-215ENST00000556210 CHKAP35790 457 aa15.68■□□□□ 0.1
CUX1-215ENST00000556210 TRPM8Q7Z2W7 1104 aa15.68■□□□□ 0.1
CUX1-215ENST00000556210 ZNF606Q8WXB4 792 aa15.68■□□□□ 0.1
CUX1-215ENST00000556210 MCUR1Q96AQ8 359 aa15.68■□□□□ 0.1
CUX1-215ENST00000556210 FAF2Q96CS3 445 aa15.68■□□□□ 0.1
CUX1-215ENST00000556210 SPDL1Q96EA4 605 aa15.68■□□□□ 0.1
CUX1-215ENST00000556210 ECT2Q9H8V3 914 aa15.68■□□□□ 0.1
CUX1-215ENST00000556210 G3BP2Q9UN86 482 aaKnown RBP15.68■□□□□ 0.1
CUX1-215ENST00000556210 CHMP2BQ9UQN3 213 aa15.68■□□□□ 0.1
CUX1-215ENST00000556210 R3HDM2Q9Y2K5 976 aaKnown RBP15.68■□□□□ 0.1
CUX1-215ENST00000556210 UBIAD1Q9Y5Z9 338 aa15.68■□□□□ 0.1
CUX1-215ENST00000556210 ADORA2BP29275 332 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms