RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 MAD2L2Q9UI95 211 aa11.24□□□□□ -0.61
ACTN1-216ENST00000556083 ITM2BQ9Y287 266 aa11.24□□□□□ -0.61
ACTN1-216ENST00000556083 TRPC5OSA6NMA1 111 aa11.24□□□□□ -0.61
ACTN1-216ENST00000556083 SNRPAP09012 282 aaKnown RBP11.24□□□□□ -0.61
ACTN1-216ENST00000556083 HOXB8P17481 243 aaPredicted RBP11.24□□□□□ -0.61
ACTN1-216ENST00000556083 RPL10AP62906 217 aaKnown RBP11.24□□□□□ -0.61
ACTN1-216ENST00000556083 PDK2Q15119 407 aa11.24□□□□□ -0.61
ACTN1-216ENST00000556083 RBBP8NLQ8NC74 664 aaPredicted RBP11.24□□□□□ -0.61
ACTN1-216ENST00000556083 AGLP35573 1532 aa11.24□□□□□ -0.61
ACTN1-216ENST00000556083 USP32Q8NFA0 1604 aa11.24□□□□□ -0.61
ACTN1-216ENST00000556083 SNTNA6NMZ2 147 aa11.24□□□□□ -0.61
ACTN1-216ENST00000556083 NCAM2O15394 837 aa11.24□□□□□ -0.61
ACTN1-216ENST00000556083 BNIP3LO60238 219 aa11.24□□□□□ -0.61
ACTN1-216ENST00000556083 UCHL3P15374 230 aa11.24□□□□□ -0.61
ACTN1-216ENST00000556083 ADORA2BP29275 332 aa11.24□□□□□ -0.61
ACTN1-216ENST00000556083 ATICP31939 592 aa11.24□□□□□ -0.61
ACTN1-216ENST00000556083 HMGCS2P54868 508 aa11.24□□□□□ -0.61
ACTN1-216ENST00000556083 MCL1Q07820 350 aa11.24□□□□□ -0.61
ACTN1-216ENST00000556083 DPYDQ12882 1025 aa11.24□□□□□ -0.61
ACTN1-216ENST00000556083 FLOT2Q14254 428 aa11.24□□□□□ -0.61
ACTN1-216ENST00000556083 ACCSLQ4AC99 568 aa11.24□□□□□ -0.61
ACTN1-216ENST00000556083 ATF7IP2Q5U623 682 aa11.24□□□□□ -0.61
ACTN1-216ENST00000556083 ATG9AQ7Z3C6 839 aa11.24□□□□□ -0.61
ACTN1-216ENST00000556083 PCSK9Q8NBP7 692 aaKnown RBP11.24□□□□□ -0.61
ACTN1-216ENST00000556083 HEMGNQ9BXL5 484 aa11.24□□□□□ -0.61
ACTN1-216ENST00000556083 MRPL1Q9BYD6 325 aaKnown RBP11.24□□□□□ -0.61
ACTN1-216ENST00000556083 BRD8Q9H0E9 1235 aa11.24□□□□□ -0.61
ACTN1-216ENST00000556083 ECT2Q9H8V3 914 aa11.24□□□□□ -0.61
ACTN1-216ENST00000556083 ARHGEF38Q9NXL2 777 aa11.24□□□□□ -0.61
ACTN1-216ENST00000556083 PCSK1NQ9UHG2 260 aa11.24□□□□□ -0.61
ACTN1-216ENST00000556083 PRR12Q9ULL5 1215 aa11.24□□□□□ -0.61
ACTN1-216ENST00000556083 M0R3G1 203 aa11.24□□□□□ -0.61
ACTN1-216ENST00000556083 PSTPIP1O43586 416 aa11.24□□□□□ -0.61
ACTN1-216ENST00000556083 CLASP2O75122 1294 aaKnown RBP11.24□□□□□ -0.61
ACTN1-216ENST00000556083 SYF2O95926 243 aaKnown RBP11.24□□□□□ -0.61
ACTN1-216ENST00000556083 ODC1P11926 461 aa11.24□□□□□ -0.61
ACTN1-216ENST00000556083 MAPK1P28482 360 aa11.24□□□□□ -0.61
ACTN1-216ENST00000556083 GEMP55040 296 aa11.24□□□□□ -0.61
ACTN1-216ENST00000556083 FCGRTP55899 365 aa11.24□□□□□ -0.61
ACTN1-216ENST00000556083 SHC4Q6S5L8 630 aa11.24□□□□□ -0.61
ACTN1-216ENST00000556083 NT5DC4Q86YG4 428 aa11.24□□□□□ -0.61
ACTN1-216ENST00000556083 MICALL2Q8IY33 904 aa11.24□□□□□ -0.61
ACTN1-216ENST00000556083 GLT1D1Q96MS3 346 aa11.24□□□□□ -0.61
ACTN1-216ENST00000556083 ZNF556Q9HAH1 456 aa11.24□□□□□ -0.61
ACTN1-216ENST00000556083 CASS4Q9NQ75 786 aa11.24□□□□□ -0.61
ACTN1-216ENST00000556083 SH3BP1Q9Y3L3 701 aa11.24□□□□□ -0.61
ACTN1-216ENST00000556083 SPACA6W5XKT8 324 aa11.24□□□□□ -0.61
ACTN1-216ENST00000556083 SLCO1B7G3V0H7 640 aa11.23□□□□□ -0.61
ACTN1-216ENST00000556083 TLR2O60603 784 aa11.23□□□□□ -0.61
ACTN1-216ENST00000556083 DIAPH2O60879 1101 aa11.23□□□□□ -0.61
ACTN1-216ENST00000556083 SEC31AO94979 1220 aaKnown RBP11.23□□□□□ -0.61
ACTN1-216ENST00000556083 SLC11A2P49281 568 aa11.23□□□□□ -0.61
ACTN1-216ENST00000556083 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.23□□□□□ -0.61
ACTN1-216ENST00000556083 BFSP2Q13515 415 aa11.23□□□□□ -0.61
ACTN1-216ENST00000556083 BAATQ14032 418 aaPredicted RBP11.23□□□□□ -0.61
ACTN1-216ENST00000556083 TAGAPQ8N103 731 aa11.23□□□□□ -0.61
ACTN1-216ENST00000556083 IGDCC4Q8TDY8 1250 aa11.23□□□□□ -0.61
ACTN1-216ENST00000556083 SLC7A5P2Q9GIP4 190 aa11.23□□□□□ -0.61
ACTN1-216ENST00000556083 SPHKAPQ2M3C7 1700 aa11.23□□□□□ -0.61
ACTN1-216ENST00000556083 UBA6A0AVT1 1052 aaPredicted RBP11.23□□□□□ -0.61
ACTN1-216ENST00000556083 EEF2KO00418 725 aaKnown RBP11.23□□□□□ -0.61
ACTN1-216ENST00000556083 SOAT2O75908 522 aa11.23□□□□□ -0.61
ACTN1-216ENST00000556083 CAMTA2O94983 1202 aa11.23□□□□□ -0.61
ACTN1-216ENST00000556083 LRRC23Q53EV4 343 aaPredicted RBP11.23□□□□□ -0.61
ACTN1-216ENST00000556083 LRRC8EQ6NSJ5 796 aa11.23□□□□□ -0.61
ACTN1-216ENST00000556083 OOSP2Q86WS3 158 aa11.23□□□□□ -0.61
ACTN1-216ENST00000556083 SRBD1Q8N5C6 995 aaKnown RBP11.23□□□□□ -0.61
ACTN1-216ENST00000556083 ZNF555Q8NEP9 628 aa11.23□□□□□ -0.61
ACTN1-216ENST00000556083 TMC2Q8TDI7 906 aa11.23□□□□□ -0.61
ACTN1-216ENST00000556083 EXT2Q93063 718 aa11.23□□□□□ -0.61
ACTN1-216ENST00000556083 MRPL48Q96GC5 212 aaKnown RBP11.23□□□□□ -0.61
ACTN1-216ENST00000556083 TRABDQ9H4I3 376 aa11.23□□□□□ -0.61
ACTN1-216ENST00000556083 CCDC134Q9H6E4 229 aa11.23□□□□□ -0.61
ACTN1-216ENST00000556083 WARS2Q9UGM6 360 aaKnown RBP11.23□□□□□ -0.61
ACTN1-216ENST00000556083 DRG1Q9Y295 367 aaKnown RBP11.23□□□□□ -0.61
ACTN1-216ENST00000556083 FNDC3AQ9Y2H6 1198 aaKnown RBP11.23□□□□□ -0.61
ACTN1-216ENST00000556083 COPG1Q9Y678 874 aaKnown RBP11.23□□□□□ -0.61
ACTN1-216ENST00000556083 CDC42BPAQ5VT25 1732 aa11.23□□□□□ -0.61
ACTN1-216ENST00000556083 WDR91A4D1P6 747 aa11.23□□□□□ -0.61
ACTN1-216ENST00000556083 DEAF1O75398 565 aaPredicted RBP11.23□□□□□ -0.61
ACTN1-216ENST00000556083 LSM8O95777 96 aaKnown RBP11.23□□□□□ -0.61
ACTN1-216ENST00000556083 PRLRP16471 622 aa11.23□□□□□ -0.61
ACTN1-216ENST00000556083 GPD1P21695 349 aa11.23□□□□□ -0.61
ACTN1-216ENST00000556083 ALDH1A3P47895 512 aa11.23□□□□□ -0.61
ACTN1-216ENST00000556083 SKOR1P84550 965 aa11.23□□□□□ -0.61
ACTN1-216ENST00000556083 ZNF200P98182 395 aaPredicted RBP11.23□□□□□ -0.61
ACTN1-216ENST00000556083 CENPPQ6IPU0 288 aa11.23□□□□□ -0.61
ACTN1-216ENST00000556083 PRR5LQ6MZQ0 368 aa11.23□□□□□ -0.61
ACTN1-216ENST00000556083 FBXO38Q6PIJ6 1188 aa11.23□□□□□ -0.61
ACTN1-216ENST00000556083 NLRP14Q86W24 1093 aa11.23□□□□□ -0.61
ACTN1-216ENST00000556083 ARRDC4Q8NCT1 418 aa11.23□□□□□ -0.61
ACTN1-216ENST00000556083 ZC3H7BQ9UGR2 993 aaKnown RBP11.23□□□□□ -0.61
ACTN1-216ENST00000556083 AAR2Q9Y312 384 aaKnown RBP11.23□□□□□ -0.61
ACTN1-216ENST00000556083 TRIM49BA6NDI0 452 aa11.23□□□□□ -0.61
ACTN1-216ENST00000556083 PSMD14O00487 310 aa11.23□□□□□ -0.61
ACTN1-216ENST00000556083 GZMAP12544 262 aa11.23□□□□□ -0.61
ACTN1-216ENST00000556083 RAB27AP51159 221 aa11.23□□□□□ -0.61
ACTN1-216ENST00000556083 NME3Q13232 169 aa11.23□□□□□ -0.61
ACTN1-216ENST00000556083 STX3Q13277 289 aa11.23□□□□□ -0.61
ACTN1-216ENST00000556083 TP53BP2Q13625 1128 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms