RNA–Protein interactions for RNA: ENST00000555953.1

SCFD1-217, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-217ENST00000555953 MTHFD1P11586 935 aaKnown RBP5.47□□□□□ -1.53
SCFD1-217ENST00000555953 WT1P19544 449 aaPredicted RBP5.47□□□□□ -1.53
SCFD1-217ENST00000555953 MC2RQ01718 297 aa5.47□□□□□ -1.53
SCFD1-217ENST00000555953 SRSF4Q08170 494 aaKnown RBP5.47□□□□□ -1.53
SCFD1-217ENST00000555953 CLUL1Q15846 466 aa5.47□□□□□ -1.53
SCFD1-217ENST00000555953 TSTD2Q5T7W7 516 aa5.47□□□□□ -1.53
SCFD1-217ENST00000555953 RSPH3Q86UC2 560 aa5.47□□□□□ -1.53
SCFD1-217ENST00000555953 AMOTL1Q8IY63 956 aa5.47□□□□□ -1.53
SCFD1-217ENST00000555953 ADGRG5Q8IZF4 528 aa5.47□□□□□ -1.53
SCFD1-217ENST00000555953 NSUN7Q8NE18 718 aaKnown RBP5.47□□□□□ -1.53
SCFD1-217ENST00000555953 TOR1AIP2Q8NFQ8 470 aa5.47□□□□□ -1.53
SCFD1-217ENST00000555953 MYCBPAPQ8TBZ2 947 aa5.47□□□□□ -1.53
SCFD1-217ENST00000555953 KMT5AQ9NQR1 393 aa5.47□□□□□ -1.53
SCFD1-217ENST00000555953 SLC45A2Q9UMX9 530 aa5.47□□□□□ -1.53
SCFD1-217ENST00000555953 ORC4O43929 436 aa5.46□□□□□ -1.54
SCFD1-217ENST00000555953 SUN1O94901 812 aa5.46□□□□□ -1.54
SCFD1-217ENST00000555953 CHRM2P08172 466 aa5.46□□□□□ -1.54
SCFD1-217ENST00000555953 GPD1P21695 349 aa5.46□□□□□ -1.54
SCFD1-217ENST00000555953 ZNF280AP59817 542 aaPredicted RBP5.46□□□□□ -1.54
SCFD1-217ENST00000555953 CDC42EP1Q00587 391 aa5.46□□□□□ -1.54
SCFD1-217ENST00000555953 ZNF844Q08AG5 666 aa5.46□□□□□ -1.54
SCFD1-217ENST00000555953 DYRK1AQ13627 763 aa5.46□□□□□ -1.54
SCFD1-217ENST00000555953 TXNRD1Q16881 649 aa5.46□□□□□ -1.54
SCFD1-217ENST00000555953 NBPF8Q3BBV2 869 aa5.46□□□□□ -1.54
SCFD1-217ENST00000555953 MIGA2Q7L4E1 593 aa5.46□□□□□ -1.54
SCFD1-217ENST00000555953 IL17RDQ8NFM7 739 aa5.46□□□□□ -1.54
SCFD1-217ENST00000555953 ATL2Q8NHH9 583 aa5.46□□□□□ -1.54
SCFD1-217ENST00000555953 SSH1Q8WYL5 1049 aa5.46□□□□□ -1.54
SCFD1-217ENST00000555953 DPF1Q92782 380 aa5.46□□□□□ -1.54
SCFD1-217ENST00000555953 LRIG1Q96JA1 1093 aa5.46□□□□□ -1.54
SCFD1-217ENST00000555953 JKAMPQ9P055 326 aa5.46□□□□□ -1.54
SCFD1-217ENST00000555953 PHLDB1Q86UU1 1377 aa5.45□□□□□ -1.54
SCFD1-217ENST00000555953 MANSC4A6NHS7 340 aaPredicted RBP5.45□□□□□ -1.54
SCFD1-217ENST00000555953 NDUFS2O75306 463 aa5.45□□□□□ -1.54
SCFD1-217ENST00000555953 SLC43A1O75387 559 aa5.45□□□□□ -1.54
SCFD1-217ENST00000555953 ERBB2P04626 1255 aa5.45□□□□□ -1.54
SCFD1-217ENST00000555953 CD1AP06126 327 aa5.45□□□□□ -1.54
SCFD1-217ENST00000555953 ANXA11P50995 505 aaKnown RBP5.45□□□□□ -1.54
SCFD1-217ENST00000555953 PTPRRQ15256 657 aa5.45□□□□□ -1.54
SCFD1-217ENST00000555953 EPHA10Q5JZY3 1008 aa5.45□□□□□ -1.54
SCFD1-217ENST00000555953 ZNF365Q70YC5 407 aa5.45□□□□□ -1.54
SCFD1-217ENST00000555953 CFAP52Q8N1V2 620 aa5.45□□□□□ -1.54
SCFD1-217ENST00000555953 TMIEQ8NEW7 156 aa5.45□□□□□ -1.54
SCFD1-217ENST00000555953 JADE3Q92613 823 aa5.45□□□□□ -1.54
SCFD1-217ENST00000555953 PGBD1Q96JS3 809 aa5.45□□□□□ -1.54
SCFD1-217ENST00000555953 PACSIN1Q9BY11 444 aa5.45□□□□□ -1.54
SCFD1-217ENST00000555953 SAP30BPQ9UHR5 308 aaKnown RBP5.45□□□□□ -1.54
SCFD1-217ENST00000555953 NEU2Q9Y3R4 380 aa5.45□□□□□ -1.54
SCFD1-217ENST00000555953 CCDC195A0A1B0GUA6 201 aa5.44□□□□□ -1.54
SCFD1-217ENST00000555953 LINC00473A8K010 186 aa5.44□□□□□ -1.54
SCFD1-217ENST00000555953 PPP3CBP16298 524 aa5.44□□□□□ -1.54
SCFD1-217ENST00000555953 C5AR1P21730 350 aa5.44□□□□□ -1.54
SCFD1-217ENST00000555953 ITPKBP27987 946 aa5.44□□□□□ -1.54
SCFD1-217ENST00000555953 IARSP41252 1262 aaKnown RBP5.44□□□□□ -1.54
SCFD1-217ENST00000555953 HNRNPMP52272 730 aaKnown RBP eCLIP5.44□□□□□ -1.54
SCFD1-217ENST00000555953 INAVAQ3KP66 663 aa5.44□□□□□ -1.54
SCFD1-217ENST00000555953 PREPLQ4J6C6 727 aaPredicted RBP5.44□□□□□ -1.54
SCFD1-217ENST00000555953 TMPRSS9Q7Z410 1059 aa5.44□□□□□ -1.54
SCFD1-217ENST00000555953 C1QL2Q7Z5L3 287 aa5.44□□□□□ -1.54
SCFD1-217ENST00000555953 AMIGO2Q86SJ2 522 aa5.44□□□□□ -1.54
SCFD1-217ENST00000555953 CBARPQ8N350 705 aaPredicted RBP5.44□□□□□ -1.54
SCFD1-217ENST00000555953 CNTD1Q8N815 330 aa5.44□□□□□ -1.54
SCFD1-217ENST00000555953 PDPRQ8NCN5 879 aa5.44□□□□□ -1.54
SCFD1-217ENST00000555953 DDB2Q92466 427 aa5.44□□□□□ -1.54
SCFD1-217ENST00000555953 SMG7Q92540 1137 aaKnown RBP5.44□□□□□ -1.54
SCFD1-217ENST00000555953 SNX19Q92543 992 aa5.44□□□□□ -1.54
SCFD1-217ENST00000555953 MRGPRX4Q96LA9 322 aa5.44□□□□□ -1.54
SCFD1-217ENST00000555953 SLC29A3Q9BZD2 475 aa5.44□□□□□ -1.54
SCFD1-217ENST00000555953 IMPG2Q9BZV3 1241 aa5.44□□□□□ -1.54
SCFD1-217ENST00000555953 ADAM21Q9UKJ8 722 aa5.44□□□□□ -1.54
SCFD1-217ENST00000555953 IPPQ9Y573 584 aa5.44□□□□□ -1.54
SCFD1-217ENST00000555953 WDR27A2RRH5 827 aa5.43□□□□□ -1.54
SCFD1-217ENST00000555953 VWC2LB2RUY7 222 aa5.43□□□□□ -1.54
SCFD1-217ENST00000555953 TOR1BO14657 336 aa5.43□□□□□ -1.54
SCFD1-217ENST00000555953 SGTAO43765 313 aa5.43□□□□□ -1.54
SCFD1-217ENST00000555953 EDNRBP24530 442 aa5.43□□□□□ -1.54
SCFD1-217ENST00000555953 EXOSC10Q01780 885 aaKnown RBP5.43□□□□□ -1.54
SCFD1-217ENST00000555953 IL10RAQ13651 578 aa5.43□□□□□ -1.54
SCFD1-217ENST00000555953 C3orf36Q3SXR2 165 aa5.43□□□□□ -1.54
SCFD1-217ENST00000555953 MICALCLQ6ZW33 695 aa5.43□□□□□ -1.54
SCFD1-217ENST00000555953 PTF1AQ7RTS3 328 aa5.43□□□□□ -1.54
SCFD1-217ENST00000555953 HASPINQ8TF76 798 aa5.43□□□□□ -1.54
SCFD1-217ENST00000555953 SCARB1Q8WTV0 552 aa5.43□□□□□ -1.54
SCFD1-217ENST00000555953 HDAC10Q969S8 669 aa5.43□□□□□ -1.54
SCFD1-217ENST00000555953 ZNF778Q96MU6 729 aa5.43□□□□□ -1.54
SCFD1-217ENST00000555953 C1QTNF7Q9BXJ2 289 aa5.43□□□□□ -1.54
SCFD1-217ENST00000555953 ST3GAL5Q9UNP4 418 aa5.43□□□□□ -1.54
SCFD1-217ENST00000555953 LIMCH1Q9UPQ0 1083 aa5.43□□□□□ -1.54
SCFD1-217ENST00000555953 E9PLN8 166 aa5.42□□□□□ -1.54
SCFD1-217ENST00000555953 HTRA2O43464 458 aaPredicted RBP5.42□□□□□ -1.54
SCFD1-217ENST00000555953 ZNF81P51508 661 aa5.42□□□□□ -1.54
SCFD1-217ENST00000555953 TLE1Q04724 770 aa5.42□□□□□ -1.54
SCFD1-217ENST00000555953 RAB39AQ14964 217 aa5.42□□□□□ -1.54
SCFD1-217ENST00000555953 ACAP2Q15057 778 aa5.42□□□□□ -1.54
SCFD1-217ENST00000555953 TAPT1Q6NXT6 567 aa5.42□□□□□ -1.54
SCFD1-217ENST00000555953 PGM2L1Q6PCE3 622 aa5.42□□□□□ -1.54
SCFD1-217ENST00000555953 SLC17A8Q8NDX2 589 aa5.42□□□□□ -1.54
SCFD1-217ENST00000555953 C1orf162Q8NEQ5 155 aaPredicted RBP5.42□□□□□ -1.54
SCFD1-217ENST00000555953 FBXO41Q8TF61 875 aa5.42□□□□□ -1.54
SCFD1-217ENST00000555953 DMRTA2Q96SC8 542 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms