RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 CASD1Q96PB1 797 aa11.85□□□□□ -0.51
TMEM260-208ENST00000555905 SPAG5Q96R06 1193 aa11.85□□□□□ -0.51
TMEM260-208ENST00000555905 TTYH3Q9C0H2 523 aa11.85□□□□□ -0.51
TMEM260-208ENST00000555905 NIF3L1Q9GZT8 377 aa11.85□□□□□ -0.51
TMEM260-208ENST00000555905 XYLT2Q9H1B5 865 aa11.85□□□□□ -0.51
TMEM260-208ENST00000555905 GOLGA2P5Q9HBQ8 144 aa11.85□□□□□ -0.51
TMEM260-208ENST00000555905 NLRC4Q9NPP4 1024 aa11.85□□□□□ -0.51
TMEM260-208ENST00000555905 TBC1D13Q9NVG8 400 aa11.85□□□□□ -0.51
TMEM260-208ENST00000555905 NXF1Q9UBU9 619 aaKnown RBP11.85□□□□□ -0.51
TMEM260-208ENST00000555905 MYO6Q9UM54 1294 aa11.85□□□□□ -0.51
TMEM260-208ENST00000555905 FHOD1Q9Y613 1164 aa11.85□□□□□ -0.51
TMEM260-208ENST00000555905 FNDC1Q4ZHG4 1894 aaPredicted RBP11.85□□□□□ -0.51
TMEM260-208ENST00000555905 CASTOR2A6NHX0 329 aa11.84□□□□□ -0.51
TMEM260-208ENST00000555905 PODXLO00592 558 aa11.84□□□□□ -0.51
TMEM260-208ENST00000555905 MFAP3LO75121 409 aa11.84□□□□□ -0.51
TMEM260-208ENST00000555905 LRRN2O75325 713 aa11.84□□□□□ -0.51
TMEM260-208ENST00000555905 DGKIO75912 1065 aa11.84□□□□□ -0.51
TMEM260-208ENST00000555905 PAX3P23760 479 aa11.84□□□□□ -0.51
TMEM260-208ENST00000555905 TAF6P49848 677 aa11.84□□□□□ -0.51
TMEM260-208ENST00000555905 GATMP50440 423 aa11.84□□□□□ -0.51
TMEM260-208ENST00000555905 FXR1P51114 621 aaKnown RBP eCLIP11.84□□□□□ -0.51
TMEM260-208ENST00000555905 CLCNKBP51801 687 aa11.84□□□□□ -0.51
TMEM260-208ENST00000555905 ADKP55263 362 aaKnown RBP11.84□□□□□ -0.51
TMEM260-208ENST00000555905 YWHAEP62258 255 aaKnown RBP11.84□□□□□ -0.51
TMEM260-208ENST00000555905 TNNC1P63316 161 aa11.84□□□□□ -0.51
TMEM260-208ENST00000555905 DEFB103AP81534 67 aa11.84□□□□□ -0.51
TMEM260-208ENST00000555905 CUL2Q13617 745 aa11.84□□□□□ -0.51
TMEM260-208ENST00000555905 ARHGAP44Q17R89 818 aa11.84□□□□□ -0.51
TMEM260-208ENST00000555905 WDR72Q3MJ13 1102 aa11.84□□□□□ -0.51
TMEM260-208ENST00000555905 TMEM240Q5SV17 173 aa11.84□□□□□ -0.51
TMEM260-208ENST00000555905 LRRC43Q8N309 656 aa11.84□□□□□ -0.51
TMEM260-208ENST00000555905 TMEM130Q8N3G9 435 aa11.84□□□□□ -0.51
TMEM260-208ENST00000555905 OR8K1Q8NGG5 319 aa11.84□□□□□ -0.51
TMEM260-208ENST00000555905 HERVK_113Q902F9 699 aa11.84□□□□□ -0.51
TMEM260-208ENST00000555905 JAKMIP2Q96AA8 810 aa11.84□□□□□ -0.51
TMEM260-208ENST00000555905 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.84□□□□□ -0.51
TMEM260-208ENST00000555905 NAA15Q9BXJ9 866 aaKnown RBP11.84□□□□□ -0.51
TMEM260-208ENST00000555905 STK33Q9BYT3 514 aa11.84□□□□□ -0.51
TMEM260-208ENST00000555905 VRTNQ9H8Y1 702 aa11.84□□□□□ -0.51
TMEM260-208ENST00000555905 APOBEC3GQ9HC16 384 aaKnown RBP11.84□□□□□ -0.51
TMEM260-208ENST00000555905 ZNHIT6Q9NWK9 470 aaKnown RBP11.84□□□□□ -0.51
TMEM260-208ENST00000555905 PCDH10Q9P2E7 1040 aa11.84□□□□□ -0.51
TMEM260-208ENST00000555905 NUB1Q9Y5A7 615 aa11.84□□□□□ -0.51
TMEM260-208ENST00000555905 SCN1AP35498 2009 aa11.83□□□□□ -0.52
TMEM260-208ENST00000555905 KPNA7A9QM74 516 aa11.83□□□□□ -0.52
TMEM260-208ENST00000555905 PPEF2O14830 753 aa11.83□□□□□ -0.52
TMEM260-208ENST00000555905 STAT1P42224 750 aa11.83□□□□□ -0.52
TMEM260-208ENST00000555905 EPHB4P54760 987 aa11.83□□□□□ -0.52
TMEM260-208ENST00000555905 DSC1Q08554 894 aa11.83□□□□□ -0.52
TMEM260-208ENST00000555905 DRAP1Q14919 205 aaPredicted RBP11.83□□□□□ -0.52
TMEM260-208ENST00000555905 UPP1Q16831 310 aa11.83□□□□□ -0.52
TMEM260-208ENST00000555905 PAN2Q504Q3 1202 aaKnown RBP11.83□□□□□ -0.52
TMEM260-208ENST00000555905 SFMBT2Q5VUG0 894 aa11.83□□□□□ -0.52
TMEM260-208ENST00000555905 SCARA3Q6AZY7 606 aa11.83□□□□□ -0.52
TMEM260-208ENST00000555905 FAM117BQ6P1L5 589 aa11.83□□□□□ -0.52
TMEM260-208ENST00000555905 PDXDC1Q6P996 788 aa11.83□□□□□ -0.52
TMEM260-208ENST00000555905 DCLRE1AQ6PJP8 1040 aa11.83□□□□□ -0.52
TMEM260-208ENST00000555905 ZNF280BQ86YH2 543 aa11.83□□□□□ -0.52
TMEM260-208ENST00000555905 TC2NQ8N9U0 490 aa11.83□□□□□ -0.52
TMEM260-208ENST00000555905 BAP1Q92560 729 aa11.83□□□□□ -0.52
TMEM260-208ENST00000555905 SYN2Q92777 582 aaPredicted RBP11.83□□□□□ -0.52
TMEM260-208ENST00000555905 ELMO3Q96BJ8 720 aa11.83□□□□□ -0.52
TMEM260-208ENST00000555905 PANX2Q96RD6 677 aa11.83□□□□□ -0.52
TMEM260-208ENST00000555905 MMS19Q96T76 1030 aa11.83□□□□□ -0.52
TMEM260-208ENST00000555905 DNAJC7Q99615 494 aa11.83□□□□□ -0.52
TMEM260-208ENST00000555905 SLC4A7Q9Y6M7 1214 aa11.83□□□□□ -0.52
TMEM260-208ENST00000555905 LRRC53A6NM62 1247 aa11.82□□□□□ -0.52
TMEM260-208ENST00000555905 F8VZ95 297 aa11.82□□□□□ -0.52
TMEM260-208ENST00000555905 RNF225M0QZC1 329 aaPredicted RBP11.82□□□□□ -0.52
TMEM260-208ENST00000555905 NRDCO43847 1150 aa11.82□□□□□ -0.52
TMEM260-208ENST00000555905 B3GAT3O94766 335 aa11.82□□□□□ -0.52
TMEM260-208ENST00000555905 DDHD2O94830 711 aa11.82□□□□□ -0.52
TMEM260-208ENST00000555905 CCDC172P0C7W6 258 aa11.82□□□□□ -0.52
TMEM260-208ENST00000555905 KRT5P13647 590 aa11.82□□□□□ -0.52
TMEM260-208ENST00000555905 DEKP35659 375 aaKnown RBP11.82□□□□□ -0.52
TMEM260-208ENST00000555905 SOX5P35711 763 aa11.82□□□□□ -0.52
TMEM260-208ENST00000555905 ASPAP45381 313 aa11.82□□□□□ -0.52
TMEM260-208ENST00000555905 OR1G1P47890 313 aa11.82□□□□□ -0.52
TMEM260-208ENST00000555905 JAM2P57087 298 aa11.82□□□□□ -0.52
TMEM260-208ENST00000555905 LILRA4P59901 499 aa11.82□□□□□ -0.52
TMEM260-208ENST00000555905 GOLGA8FQ08AF8 430 aa11.82□□□□□ -0.52
TMEM260-208ENST00000555905 GOLGA8DPQ0D2H9 430 aa11.82□□□□□ -0.52
TMEM260-208ENST00000555905 ASIC2Q16515 512 aa11.82□□□□□ -0.52
TMEM260-208ENST00000555905 SMYD5Q6GMV2 418 aa11.82□□□□□ -0.52
TMEM260-208ENST00000555905 SCARA5Q6ZMJ2 495 aa11.82□□□□□ -0.52
TMEM260-208ENST00000555905 COLGALT2Q8IYK4 626 aa11.82□□□□□ -0.52
TMEM260-208ENST00000555905 TTC39CQ8N584 583 aa11.82□□□□□ -0.52
TMEM260-208ENST00000555905 PHOSPHO2Q8TCD6 241 aa11.82□□□□□ -0.52
TMEM260-208ENST00000555905 KREMEN1Q96MU8 473 aa11.82□□□□□ -0.52
TMEM260-208ENST00000555905 SLC9A7Q96T83 725 aa11.82□□□□□ -0.52
TMEM260-208ENST00000555905 YME1L1Q96TA2 773 aa11.82□□□□□ -0.52
TMEM260-208ENST00000555905 TMEM175Q9BSA9 504 aa11.82□□□□□ -0.52
TMEM260-208ENST00000555905 ZBED2Q9BTP6 218 aa11.82□□□□□ -0.52
TMEM260-208ENST00000555905 FAM124BQ9H5Z6 455 aaPredicted RBP11.82□□□□□ -0.52
TMEM260-208ENST00000555905 CYP3A43Q9HB55 503 aa11.82□□□□□ -0.52
TMEM260-208ENST00000555905 ABHD10Q9NUJ1 306 aa11.82□□□□□ -0.52
TMEM260-208ENST00000555905 GDAP2Q9NXN4 497 aa11.82□□□□□ -0.52
TMEM260-208ENST00000555905 CACNG4Q9UBN1 327 aa11.82□□□□□ -0.52
TMEM260-208ENST00000555905 AJAP1Q9UKB5 411 aaPredicted RBP11.82□□□□□ -0.52
TMEM260-208ENST00000555905 POLIQ9UNA4 740 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms