RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 GYPCP04921 128 aa12□□□□□ -0.49
SHMT2-220ENST00000555634 FERP16591 822 aa12□□□□□ -0.49
SHMT2-220ENST00000555634 CASP14P31944 242 aa12□□□□□ -0.49
SHMT2-220ENST00000555634 KRT9P35527 623 aa12□□□□□ -0.49
SHMT2-220ENST00000555634 PDE6CP51160 858 aa12□□□□□ -0.49
SHMT2-220ENST00000555634 CLCNKBP51801 687 aa12□□□□□ -0.49
SHMT2-220ENST00000555634 BPIFB4P59827 614 aa12□□□□□ -0.49
SHMT2-220ENST00000555634 DEFB103AP81534 67 aa12□□□□□ -0.49
SHMT2-220ENST00000555634 ASIC2Q16515 512 aa12□□□□□ -0.49
SHMT2-220ENST00000555634 ARHGAP44Q17R89 818 aa12□□□□□ -0.49
SHMT2-220ENST00000555634 TDRD12Q587J7 1177 aaKnown RBP12□□□□□ -0.49
SHMT2-220ENST00000555634 TMEM240Q5SV17 173 aa12□□□□□ -0.49
SHMT2-220ENST00000555634 DCLRE1AQ6PJP8 1040 aa12□□□□□ -0.49
SHMT2-220ENST00000555634 RRAGAQ7L523 313 aa12□□□□□ -0.49
SHMT2-220ENST00000555634 ZNF558Q96NG5 402 aa12□□□□□ -0.49
SHMT2-220ENST00000555634 CASD1Q96PB1 797 aa12□□□□□ -0.49
SHMT2-220ENST00000555634 PI4K2AQ9BTU6 479 aa12□□□□□ -0.49
SHMT2-220ENST00000555634 NAA15Q9BXJ9 866 aaKnown RBP12□□□□□ -0.49
SHMT2-220ENST00000555634 STK33Q9BYT3 514 aa12□□□□□ -0.49
SHMT2-220ENST00000555634 SNX25Q9H3E2 840 aa12□□□□□ -0.49
SHMT2-220ENST00000555634 DEF6Q9H4E7 631 aa12□□□□□ -0.49
SHMT2-220ENST00000555634 GOLGA2P5Q9HBQ8 144 aa12□□□□□ -0.49
SHMT2-220ENST00000555634 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12□□□□□ -0.491e-9■■■■■ 76.9
SHMT2-220ENST00000555634 SIX4Q9UIU6 781 aa12□□□□□ -0.49
SHMT2-220ENST00000555634 DNAJC12Q9UKB3 198 aa12□□□□□ -0.49
SHMT2-220ENST00000555634 PCDHB12Q9Y5F1 795 aa12□□□□□ -0.49
SHMT2-220ENST00000555634 SNX9Q9Y5X1 595 aa12□□□□□ -0.49
SHMT2-220ENST00000555634 FHOD1Q9Y613 1164 aa12□□□□□ -0.49
SHMT2-220ENST00000555634 ANO9A1A5B4 782 aa11.99□□□□□ -0.49
SHMT2-220ENST00000555634 F8VZ95 297 aa11.99□□□□□ -0.49
SHMT2-220ENST00000555634 TMEM189-UBE2V1I3L0A0 370 aa11.99□□□□□ -0.49
SHMT2-220ENST00000555634 PIRO00625 290 aa11.99□□□□□ -0.49
SHMT2-220ENST00000555634 MEFVO15553 781 aaPredicted RBP11.99□□□□□ -0.49
SHMT2-220ENST00000555634 LRRN2O75325 713 aa11.99□□□□□ -0.49
SHMT2-220ENST00000555634 TADA2AO75478 443 aa11.99□□□□□ -0.49
SHMT2-220ENST00000555634 GJB5O95377 273 aa11.99□□□□□ -0.49
SHMT2-220ENST00000555634 ALDH2P05091 517 aa11.99□□□□□ -0.49
SHMT2-220ENST00000555634 MAGEA10P43363 369 aaPredicted RBP11.99□□□□□ -0.49
SHMT2-220ENST00000555634 KLK7P49862 253 aa11.99□□□□□ -0.49
SHMT2-220ENST00000555634 GUCY2FP51841 1108 aa11.99□□□□□ -0.49
SHMT2-220ENST00000555634 DSC1Q08554 894 aa11.99□□□□□ -0.49
SHMT2-220ENST00000555634 KCNMA1Q12791 1236 aa11.99□□□□□ -0.49
SHMT2-220ENST00000555634 BMS1Q14692 1282 aaKnown RBP11.99□□□□□ -0.49
SHMT2-220ENST00000555634 UPP1Q16831 310 aa11.99□□□□□ -0.49
SHMT2-220ENST00000555634 IQCEQ6IPM2 695 aa11.99□□□□□ -0.49
SHMT2-220ENST00000555634 DPH6Q7L8W6 267 aa11.99□□□□□ -0.49
SHMT2-220ENST00000555634 HERC6Q8IVU3 1022 aa11.99□□□□□ -0.49
SHMT2-220ENST00000555634 TMEM86AQ8N2M4 240 aa11.99□□□□□ -0.49
SHMT2-220ENST00000555634 FIBCD1Q8N539 461 aa11.99□□□□□ -0.49
SHMT2-220ENST00000555634 TOP6BLQ8N6T0 577 aa11.99□□□□□ -0.49
SHMT2-220ENST00000555634 OR8K1Q8NGG5 319 aa11.99□□□□□ -0.49
SHMT2-220ENST00000555634 SPATA18Q8TC71 538 aa11.99□□□□□ -0.49
SHMT2-220ENST00000555634 SYN2Q92777 582 aaPredicted RBP11.99□□□□□ -0.49
SHMT2-220ENST00000555634 SEMA4DQ92854 862 aa11.99□□□□□ -0.49
SHMT2-220ENST00000555634 PANX2Q96RD6 677 aa11.99□□□□□ -0.49
SHMT2-220ENST00000555634 GANQ9H2C0 597 aa11.99□□□□□ -0.49
SHMT2-220ENST00000555634 LUC7LQ9NQ29 371 aaKnown RBP11.99□□□□□ -0.49
SHMT2-220ENST00000555634 ABHD10Q9NUJ1 306 aa11.99□□□□□ -0.49
SHMT2-220ENST00000555634 PLAGL2Q9UPG8 496 aa11.99□□□□□ -0.49
SHMT2-220ENST00000555634 FAN1Q9Y2M0 1017 aa11.99□□□□□ -0.49
SHMT2-220ENST00000555634 BZW2Q9Y6E2 419 aaKnown RBP11.99□□□□□ -0.49
SHMT2-220ENST00000555634 LRRC53A6NM62 1247 aa11.98□□□□□ -0.49
SHMT2-220ENST00000555634 MED7O43513 233 aa11.98□□□□□ -0.49
SHMT2-220ENST00000555634 CD58P19256 250 aa11.98□□□□□ -0.49
SHMT2-220ENST00000555634 SOX5P35711 763 aa11.98□□□□□ -0.49
SHMT2-220ENST00000555634 SOX4Q06945 474 aaPredicted RBP11.98□□□□□ -0.49
SHMT2-220ENST00000555634 DRAP1Q14919 205 aaPredicted RBP11.98□□□□□ -0.49
SHMT2-220ENST00000555634 PTPN21Q16825 1174 aa11.98□□□□□ -0.49
SHMT2-220ENST00000555634 TCTN1Q2MV58 587 aa11.98□□□□□ -0.49
SHMT2-220ENST00000555634 SPOPLQ6IQ16 392 aa11.98□□□□□ -0.49
SHMT2-220ENST00000555634 ARHGEF19Q8IW93 802 aa11.98□□□□□ -0.49
SHMT2-220ENST00000555634 COLGALT2Q8IYK4 626 aa11.98□□□□□ -0.49
SHMT2-220ENST00000555634 ADGRF2Q8IZF7 708 aa11.98□□□□□ -0.49
SHMT2-220ENST00000555634 TXLNBQ8N3L3 684 aa11.98□□□□□ -0.49
SHMT2-220ENST00000555634 GSTCDQ8NEC7 633 aa11.98□□□□□ -0.49
SHMT2-220ENST00000555634 TMEM169Q96HH4 297 aa11.98□□□□□ -0.49
SHMT2-220ENST00000555634 PDLIM2Q96JY6 352 aa11.98□□□□□ -0.49
SHMT2-220ENST00000555634 TNIP3Q96KP6 325 aa11.98□□□□□ -0.49
SHMT2-220ENST00000555634 PPP1R9BQ96SB3 815 aa11.98□□□□□ -0.49
SHMT2-220ENST00000555634 RAD9AQ99638 391 aa11.98□□□□□ -0.49
SHMT2-220ENST00000555634 XYLT2Q9H1B5 865 aa11.98□□□□□ -0.49
SHMT2-220ENST00000555634 PDCL3Q9H2J4 239 aa11.98□□□□□ -0.49
SHMT2-220ENST00000555634 SIX2Q9NPC8 291 aa11.98□□□□□ -0.49
SHMT2-220ENST00000555634 GDAP2Q9NXN4 497 aa11.98□□□□□ -0.49
SHMT2-220ENST00000555634 ADAM28Q9UKQ2 775 aa11.98□□□□□ -0.49
SHMT2-220ENST00000555634 PRG3Q9Y2Y8 225 aaPredicted RBP11.98□□□□□ -0.49
SHMT2-220ENST00000555634 CEP83Q9Y592 693 aa11.98□□□□□ -0.49
SHMT2-220ENST00000555634 PCDHB4Q9Y5E5 795 aa11.98□□□□□ -0.49
SHMT2-220ENST00000555634 PLXNA4Q9HCM2 1894 aa11.97□□□□□ -0.49
SHMT2-220ENST00000555634 ATP8B3O60423 1300 aa11.97□□□□□ -0.49
SHMT2-220ENST00000555634 CYB561D2O14569 222 aa11.97□□□□□ -0.49
SHMT2-220ENST00000555634 CST3P01034 146 aaPredicted RBP11.97□□□□□ -0.49
SHMT2-220ENST00000555634 PCSK1P29120 753 aa11.97□□□□□ -0.49
SHMT2-220ENST00000555634 ASPAP45381 313 aa11.97□□□□□ -0.49
SHMT2-220ENST00000555634 LHX1P48742 406 aa11.97□□□□□ -0.49
SHMT2-220ENST00000555634 LILRA4P59901 499 aa11.97□□□□□ -0.49
SHMT2-220ENST00000555634 ARID5AQ03989 594 aa11.97□□□□□ -0.49
SHMT2-220ENST00000555634 KRT17Q04695 432 aa11.97□□□□□ -0.49
SHMT2-220ENST00000555634 PTK2Q05397 1052 aa11.97□□□□□ -0.49
SHMT2-220ENST00000555634 KLHL30Q0D2K2 578 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms