RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 ZFP42Q96MM3 310 aa10.36□□□□□ -0.75
HNRNPC-220ENST00000555585 GAD1Q99259 594 aa10.36□□□□□ -0.75
HNRNPC-220ENST00000555585 ARID3AQ99856 593 aa10.36□□□□□ -0.75
HNRNPC-220ENST00000555585 NIF3L1Q9GZT8 377 aa10.36□□□□□ -0.75
HNRNPC-220ENST00000555585 RSAD1Q9HA92 442 aa10.36□□□□□ -0.75
HNRNPC-220ENST00000555585 UBN1Q9NPG3 1134 aa10.36□□□□□ -0.75
HNRNPC-220ENST00000555585 SPTLC3Q9NUV7 552 aa10.36□□□□□ -0.75
HNRNPC-220ENST00000555585 POLIQ9UNA4 740 aa10.36□□□□□ -0.75
HNRNPC-220ENST00000555585 PPP2R2CQ9Y2T4 447 aa10.36□□□□□ -0.75
HNRNPC-220ENST00000555585 BOLA1Q9Y3E2 137 aa10.36□□□□□ -0.75
HNRNPC-220ENST00000555585 ADGRG1Q9Y653 693 aa10.36□□□□□ -0.75
HNRNPC-220ENST00000555585 CENPFP49454 3210 aa10.36□□□□□ -0.75
HNRNPC-220ENST00000555585 SCN5AQ14524 2016 aa10.36□□□□□ -0.75
HNRNPC-220ENST00000555585 ARL5CA6NH57 179 aa10.35□□□□□ -0.75
HNRNPC-220ENST00000555585 EIF3CLB5ME19 914 aaKnown RBP10.35□□□□□ -0.75
HNRNPC-220ENST00000555585 C9IYK1 514 aa10.35□□□□□ -0.75
HNRNPC-220ENST00000555585 PTGESO14684 152 aa10.35□□□□□ -0.75
HNRNPC-220ENST00000555585 CYP26A1O43174 497 aa10.35□□□□□ -0.75
HNRNPC-220ENST00000555585 THP07101 528 aa10.35□□□□□ -0.75
HNRNPC-220ENST00000555585 ATF7P17544 494 aaPredicted RBP10.35□□□□□ -0.75
HNRNPC-220ENST00000555585 CD58P19256 250 aa10.35□□□□□ -0.75
HNRNPC-220ENST00000555585 CYP3A5P20815 502 aa10.35□□□□□ -0.75
HNRNPC-220ENST00000555585 TNFAIP3P21580 790 aa10.35□□□□□ -0.75
HNRNPC-220ENST00000555585 SCNN1GP51170 649 aa10.35□□□□□ -0.75
HNRNPC-220ENST00000555585 YWHAEP62258 255 aaKnown RBP10.35□□□□□ -0.75
HNRNPC-220ENST00000555585 TNNC1P63316 161 aa10.35□□□□□ -0.75
HNRNPC-220ENST00000555585 KRT83P78385 493 aa10.35□□□□□ -0.75
HNRNPC-220ENST00000555585 PTK2Q05397 1052 aa10.35□□□□□ -0.75
HNRNPC-220ENST00000555585 WDR72Q3MJ13 1102 aa10.35□□□□□ -0.75
HNRNPC-220ENST00000555585 C9orf57Q5W0N0 161 aa10.35□□□□□ -0.75
HNRNPC-220ENST00000555585 SLC24A5Q71RS6 500 aa10.35□□□□□ -0.75
HNRNPC-220ENST00000555585 ZNF571Q7Z3V5 609 aaPredicted RBP10.35□□□□□ -0.75
HNRNPC-220ENST00000555585 DEFB128Q7Z7B8 93 aa10.35□□□□□ -0.75
HNRNPC-220ENST00000555585 KIAA1328Q86T90 577 aa10.35□□□□□ -0.75
HNRNPC-220ENST00000555585 FAM71AQ8IYT1 594 aa10.35□□□□□ -0.75
HNRNPC-220ENST00000555585 CXorf38Q8TB03 319 aa10.35□□□□□ -0.75
HNRNPC-220ENST00000555585 LINC01599Q8WXQ3 324 aa10.35□□□□□ -0.75
HNRNPC-220ENST00000555585 JAKMIP2Q96AA8 810 aa10.35□□□□□ -0.75
HNRNPC-220ENST00000555585 EIF3CQ99613 913 aaKnown RBP10.35□□□□□ -0.75
HNRNPC-220ENST00000555585 XYLT2Q9H1B5 865 aa10.35□□□□□ -0.75
HNRNPC-220ENST00000555585 WNT8AQ9H1J5 351 aa10.35□□□□□ -0.75
HNRNPC-220ENST00000555585 PRDM5Q9NQX1 630 aaPredicted RBP10.35□□□□□ -0.75
HNRNPC-220ENST00000555585 SEPT11Q9NVA2 429 aaKnown RBP10.35□□□□□ -0.75
HNRNPC-220ENST00000555585 SLC38A7Q9NVC3 462 aa10.35□□□□□ -0.75
HNRNPC-220ENST00000555585 MIOSQ9NXC5 875 aa10.35□□□□□ -0.75
HNRNPC-220ENST00000555585 INPP5FQ9Y2H2 1132 aa10.35□□□□□ -0.75
HNRNPC-220ENST00000555585 TDRD15B5MCY1 1934 aaKnown RBP10.35□□□□□ -0.75
HNRNPC-220ENST00000555585 CEP350Q5VT06 3117 aa10.34□□□□□ -0.75
HNRNPC-220ENST00000555585 USP27XA6NNY8 438 aa10.34□□□□□ -0.75
HNRNPC-220ENST00000555585 ENPP3O14638 875 aa10.34□□□□□ -0.75
HNRNPC-220ENST00000555585 PPEF2O14830 753 aa10.34□□□□□ -0.75
HNRNPC-220ENST00000555585 ZNF500O60304 480 aaPredicted RBP10.34□□□□□ -0.75
HNRNPC-220ENST00000555585 STAU1O95793 577 aaKnown RBP10.34□□□□□ -0.75
HNRNPC-220ENST00000555585 EOMESO95936 686 aa10.34□□□□□ -0.75
HNRNPC-220ENST00000555585 WEE2P0C1S8 567 aa10.34□□□□□ -0.75
HNRNPC-220ENST00000555585 ACO1P21399 889 aaKnown RBP10.34□□□□□ -0.75
HNRNPC-220ENST00000555585 CLCN1P35523 988 aa10.34□□□□□ -0.75
HNRNPC-220ENST00000555585 MAGEA1P43355 309 aa10.34□□□□□ -0.75
HNRNPC-220ENST00000555585 ASPAP45381 313 aa10.34□□□□□ -0.75
HNRNPC-220ENST00000555585 RAP1GAPP47736 663 aa10.34□□□□□ -0.75
HNRNPC-220ENST00000555585 PDE6CP51160 858 aa10.34□□□□□ -0.75
HNRNPC-220ENST00000555585 BPIFB4P59827 614 aa10.34□□□□□ -0.75
HNRNPC-220ENST00000555585 GFPT1Q06210 699 aaPredicted RBP10.34□□□□□ -0.75
HNRNPC-220ENST00000555585 SOX4Q06945 474 aaPredicted RBP10.34□□□□□ -0.75
HNRNPC-220ENST00000555585 GPNMBQ14956 572 aa10.34□□□□□ -0.75
HNRNPC-220ENST00000555585 TMEM270Q6UE05 265 aa10.34□□□□□ -0.75
HNRNPC-220ENST00000555585 ZNF598Q86UK7 904 aaKnown RBP10.34□□□□□ -0.75
HNRNPC-220ENST00000555585 RPUSD2Q8IZ73 545 aaKnown RBP10.34□□□□□ -0.75
HNRNPC-220ENST00000555585 LRRC52Q8N7C0 313 aa10.34□□□□□ -0.75
HNRNPC-220ENST00000555585 RBBP8NLQ8NC74 664 aaPredicted RBP10.34□□□□□ -0.75
HNRNPC-220ENST00000555585 PPP1R13BQ96KQ4 1090 aa10.34□□□□□ -0.75
HNRNPC-220ENST00000555585 ZNF560Q96MR9 790 aa10.34□□□□□ -0.75
HNRNPC-220ENST00000555585 PPP1R10Q96QC0 940 aaKnown RBP10.34□□□□□ -0.75
HNRNPC-220ENST00000555585 MMS19Q96T76 1030 aa10.34□□□□□ -0.75
HNRNPC-220ENST00000555585 AGPAT1Q99943 283 aa10.34□□□□□ -0.75
HNRNPC-220ENST00000555585 VRTNQ9H8Y1 702 aa10.34□□□□□ -0.75
HNRNPC-220ENST00000555585 GOLGA2P5Q9HBQ8 144 aa10.34□□□□□ -0.75
HNRNPC-220ENST00000555585 CISHQ9NSE2 258 aa10.34□□□□□ -0.75
HNRNPC-220ENST00000555585 TBX21Q9UL17 535 aa10.34□□□□□ -0.75
HNRNPC-220ENST00000555585 LRFN2Q9ULH4 789 aa10.34□□□□□ -0.75
HNRNPC-220ENST00000555585 A0A087X0T9 212 aa10.33□□□□□ -0.76
HNRNPC-220ENST00000555585 ANO9A1A5B4 782 aa10.33□□□□□ -0.76
HNRNPC-220ENST00000555585 GOLGA6L9A6NEM1 432 aa10.33□□□□□ -0.76
HNRNPC-220ENST00000555585 PIRO00625 290 aa10.33□□□□□ -0.76
HNRNPC-220ENST00000555585 POMCP01189 267 aa10.33□□□□□ -0.76
HNRNPC-220ENST00000555585 CXCL10P02778 98 aa10.33□□□□□ -0.76
HNRNPC-220ENST00000555585 FAM228BP0C875 321 aa10.33□□□□□ -0.76
HNRNPC-220ENST00000555585 EN2P19622 333 aaPredicted RBP10.33□□□□□ -0.76
HNRNPC-220ENST00000555585 ANXA13P27216 316 aa10.33□□□□□ -0.76
HNRNPC-220ENST00000555585 LRPAP1P30533 357 aa10.33□□□□□ -0.76
HNRNPC-220ENST00000555585 RFC2P35250 354 aa10.33□□□□□ -0.76
HNRNPC-220ENST00000555585 PNPLA4P41247 253 aa10.33□□□□□ -0.76
HNRNPC-220ENST00000555585 TAF6P49848 677 aa10.33□□□□□ -0.76
HNRNPC-220ENST00000555585 AFF1P51825 1210 aaKnown RBP10.33□□□□□ -0.76
HNRNPC-220ENST00000555585 CDH8P55286 799 aa10.33□□□□□ -0.76
HNRNPC-220ENST00000555585 FAM189BP81408 668 aa10.33□□□□□ -0.76
HNRNPC-220ENST00000555585 CYP27A1Q02318 531 aa10.33□□□□□ -0.76
HNRNPC-220ENST00000555585 BMS1Q14692 1282 aaKnown RBP10.33□□□□□ -0.76
HNRNPC-220ENST00000555585 SLC18A3Q16572 532 aa10.33□□□□□ -0.76
HNRNPC-220ENST00000555585 ASTE1Q2TB18 679 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms