RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 SH3BGRP55822 239 aaPredicted RBP11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 TNFAIP1Q13829 316 aa11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 SPARCL1Q14515 664 aa11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 RASA2Q15283 850 aa11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 SLC45A4Q5BKX6 768 aa11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 UBAP2Q5T6F2 1119 aaKnown RBP11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 OTUD6AQ7L8S5 288 aa11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 USP37Q86T82 979 aa11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 RDH13Q8NBN7 331 aa11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 GDAP1Q8TB36 358 aa11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 ZNF333Q96JL9 665 aa11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 TBC1D10AQ9BXI6 508 aa11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 GLIS2Q9BZE0 524 aaPredicted RBP11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 ZNF277Q9NRM2 450 aaPredicted RBP11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 SEPT11Q9NVA2 429 aaKnown RBP11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 SCOCQ9UIL1 159 aa11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 CHKBQ9Y259 395 aa11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 ZBTB12Q9Y330 459 aaPredicted RBP11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 WDR64B1ANS9 1081 aa11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 PDLIM1O00151 329 aa11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 ZWINTO95229 277 aa11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 CYP1A2P05177 515 aa11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 SKIP12755 728 aa11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 CREB1P16220 341 aa11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 SP100P23497 879 aaPredicted RBP11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 MARK3P27448 753 aa11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 CDC25CP30307 473 aa11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 ABCD1P33897 745 aa11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 MRPS9P82933 396 aaKnown RBP11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 CENPCQ03188 943 aa11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 SF3A3Q12874 501 aaKnown RBP eCLIP11.34□□□□□ -0.593e-6■■■■■ 42
MTHFD1-210ENST00000555252 MPP2Q14168 576 aa11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 PDK4Q16654 411 aa11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 GSTA3Q16772 222 aa11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 MUM1Q2TAK8 710 aa11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 TRIM68Q6AZZ1 485 aa11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 ARHGAP18Q8N392 663 aa11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 KCNV2Q8TDN2 545 aa11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 SLC7A6OSQ96CW6 309 aaPredicted RBP11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 IFT43Q96FT9 208 aa11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 PDGFDQ9GZP0 370 aaPredicted RBP11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 PCIF1Q9H4Z3 704 aa11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 C17orf75Q9HAS0 396 aa11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 TAS2R14Q9NYV8 317 aa11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 NINJ2Q9NZG7 142 aa11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 PHTF1Q9UMS5 762 aa11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 NAALADL1Q9UQQ1 740 aa11.34□□□□□ -0.59
MTHFD1-210ENST00000555252 C2CD2LO14523 706 aa11.33□□□□□ -0.6
MTHFD1-210ENST00000555252 NDC80O14777 642 aa11.33□□□□□ -0.6
MTHFD1-210ENST00000555252 NVLO15381 856 aaKnown RBP11.33□□□□□ -0.6
MTHFD1-210ENST00000555252 MAFGO15525 162 aa11.33□□□□□ -0.6
MTHFD1-210ENST00000555252 EDF1O60869 148 aaKnown RBP11.33□□□□□ -0.6
MTHFD1-210ENST00000555252 GH1P01241 217 aa11.33□□□□□ -0.6
MTHFD1-210ENST00000555252 IVDP26440 423 aa11.33□□□□□ -0.6
MTHFD1-210ENST00000555252 GTF2H1P32780 548 aa11.33□□□□□ -0.6
MTHFD1-210ENST00000555252 MXI1P50539 228 aa11.33□□□□□ -0.6
MTHFD1-210ENST00000555252 MFAP3P55082 362 aa11.33□□□□□ -0.6
MTHFD1-210ENST00000555252 PPP3CAQ08209 521 aa11.33□□□□□ -0.6
MTHFD1-210ENST00000555252 RASA3Q14644 834 aa11.33□□□□□ -0.6
MTHFD1-210ENST00000555252 PGM5Q15124 567 aa11.33□□□□□ -0.6
MTHFD1-210ENST00000555252 SGO2Q562F6 1265 aa11.33□□□□□ -0.6
MTHFD1-210ENST00000555252 AADACL2Q6P093 401 aa11.33□□□□□ -0.6
MTHFD1-210ENST00000555252 TMEM154Q6P9G4 183 aa11.33□□□□□ -0.6
MTHFD1-210ENST00000555252 MAEAQ7L5Y9 396 aa11.33□□□□□ -0.6
MTHFD1-210ENST00000555252 SDCCAG8Q86SQ7 713 aaPredicted RBP11.33□□□□□ -0.6
MTHFD1-210ENST00000555252 LONP2Q86WA8 852 aa11.33□□□□□ -0.6
MTHFD1-210ENST00000555252 CCDC125Q86Z20 511 aa11.33□□□□□ -0.6
MTHFD1-210ENST00000555252 IL31RAQ8NI17 732 aa11.33□□□□□ -0.6
MTHFD1-210ENST00000555252 FAM81BQ96LP2 452 aa11.33□□□□□ -0.6
MTHFD1-210ENST00000555252 TTC25Q96NG3 672 aa11.33□□□□□ -0.6
MTHFD1-210ENST00000555252 SENP7Q9BQF6 1050 aa11.33□□□□□ -0.6
MTHFD1-210ENST00000555252 CBWD1Q9BRT8 395 aa11.33□□□□□ -0.6
MTHFD1-210ENST00000555252 SSU72Q9NP77 194 aaKnown RBP11.33□□□□□ -0.6
MTHFD1-210ENST00000555252 PKD2L1Q9P0L9 805 aa11.33□□□□□ -0.6
MTHFD1-210ENST00000555252 ASIC3Q9UHC3 531 aa11.33□□□□□ -0.6
MTHFD1-210ENST00000555252 GTF3C4Q9UKN8 822 aa11.33□□□□□ -0.6
MTHFD1-210ENST00000555252 ASTN2O75129 1339 aaPredicted RBP11.33□□□□□ -0.6
MTHFD1-210ENST00000555252 SMCHD1A6NHR9 2005 aa11.33□□□□□ -0.6
MTHFD1-210ENST00000555252 WNT10BO00744 389 aa11.32□□□□□ -0.6
MTHFD1-210ENST00000555252 SPOPO43791 374 aa11.32□□□□□ -0.6
MTHFD1-210ENST00000555252 LRRN2O75325 713 aa11.32□□□□□ -0.6
MTHFD1-210ENST00000555252 ATF2P15336 505 aa11.32□□□□□ -0.6
MTHFD1-210ENST00000555252 FOXN2P32314 431 aa11.32□□□□□ -0.6
MTHFD1-210ENST00000555252 GCLMP48507 274 aa11.32□□□□□ -0.6
MTHFD1-210ENST00000555252 MARCKSL1P49006 195 aa11.32□□□□□ -0.6
MTHFD1-210ENST00000555252 DLG4P78352 724 aa11.32□□□□□ -0.6
MTHFD1-210ENST00000555252 MESDQ14696 234 aa11.32□□□□□ -0.6
MTHFD1-210ENST00000555252 ZNF746Q6NUN9 644 aaPredicted RBP11.32□□□□□ -0.6
MTHFD1-210ENST00000555252 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.32□□□□□ -0.6
MTHFD1-210ENST00000555252 ARHGEF19Q8IW93 802 aa11.32□□□□□ -0.6
MTHFD1-210ENST00000555252 FAM71AQ8IYT1 594 aa11.32□□□□□ -0.6
MTHFD1-210ENST00000555252 RPUSD2Q8IZ73 545 aaKnown RBP11.32□□□□□ -0.6
MTHFD1-210ENST00000555252 DRAXINQ8NBI3 349 aaPredicted RBP11.32□□□□□ -0.6
MTHFD1-210ENST00000555252 TMC2Q8TDI7 906 aa11.32□□□□□ -0.6
MTHFD1-210ENST00000555252 LRRC8CQ8TDW0 803 aa11.32□□□□□ -0.6
MTHFD1-210ENST00000555252 DENND1AQ8TEH3 1009 aa11.32□□□□□ -0.6
MTHFD1-210ENST00000555252 C10orf82Q8WW14 230 aa11.32□□□□□ -0.6
MTHFD1-210ENST00000555252 SPIRE2Q8WWL2 714 aa11.32□□□□□ -0.6
MTHFD1-210ENST00000555252 PSPC1Q8WXF1 523 aaKnown RBP11.32□□□□□ -0.6
MTHFD1-210ENST00000555252 MAML1Q92585 1016 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms