RNA–Protein interactions for RNA: ENST00000555235.1

MARK3-209, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-209ENST00000555235 VPS41P49754 854 aa16.96■□□□□ 0.31
MARK3-209ENST00000555235 OCRLQ01968 901 aa16.96■□□□□ 0.31
MARK3-209ENST00000555235 ALCAMQ13740 583 aa16.96■□□□□ 0.31
MARK3-209ENST00000555235 STRIP1Q5VSL9 837 aa16.96■□□□□ 0.31
MARK3-209ENST00000555235 ZCCHC9Q8N567 271 aaKnown RBP16.96■□□□□ 0.31
MARK3-209ENST00000555235 PWWP2AQ96N64 755 aa16.96■□□□□ 0.31
MARK3-209ENST00000555235 ACCSQ96QU6 501 aa16.96■□□□□ 0.31
MARK3-209ENST00000555235 RBM15Q96T37 977 aaKnown RBP eCLIP16.96■□□□□ 0.31
MARK3-209ENST00000555235 CBWD1Q9BRT8 395 aa16.96■□□□□ 0.31
MARK3-209ENST00000555235 TUBB6Q9BUF5 446 aa16.96■□□□□ 0.31
MARK3-209ENST00000555235 EHMT1Q9H9B1 1298 aa16.96■□□□□ 0.31
MARK3-209ENST00000555235 PPCSQ9HAB8 311 aa16.96■□□□□ 0.31
MARK3-209ENST00000555235 KCNG1Q9UIX4 513 aa16.96■□□□□ 0.31
MARK3-209ENST00000555235 LOXHD1Q8IVV2 1947 aa16.96■□□□□ 0.3
MARK3-209ENST00000555235 CYP26A1O43174 497 aa16.95■□□□□ 0.3
MARK3-209ENST00000555235 CCDC22O60826 627 aa16.95■□□□□ 0.3
MARK3-209ENST00000555235 ZWINTO95229 277 aa16.95■□□□□ 0.3
MARK3-209ENST00000555235 APBA3O96018 575 aa16.95■□□□□ 0.3
MARK3-209ENST00000555235 MAPK4P31152 587 aa16.95■□□□□ 0.3
MARK3-209ENST00000555235 ECE1P42892 770 aa16.95■□□□□ 0.3
MARK3-209ENST00000555235 SLC1A1P43005 524 aa16.95■□□□□ 0.3
MARK3-209ENST00000555235 MFAP3P55082 362 aa16.95■□□□□ 0.3
MARK3-209ENST00000555235 CCDC174Q6PII3 467 aa16.95■□□□□ 0.3
MARK3-209ENST00000555235 NSMFQ6X4W1 530 aa16.95■□□□□ 0.3
MARK3-209ENST00000555235 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.95■□□□□ 0.3
MARK3-209ENST00000555235 NLRP9Q7RTR0 991 aa16.95■□□□□ 0.3
MARK3-209ENST00000555235 SLC47A2Q86VL8 602 aa16.95■□□□□ 0.3
MARK3-209ENST00000555235 KREMEN1Q96MU8 473 aa16.95■□□□□ 0.3
MARK3-209ENST00000555235 CYLDQ9NQC7 956 aa16.95■□□□□ 0.3
MARK3-209ENST00000555235 KRT15P19012 456 aa16.95■□□□□ 0.3
MARK3-209ENST00000555235 ALDH1B1P30837 517 aa16.95■□□□□ 0.3
MARK3-209ENST00000555235 RFC5P40937 340 aa16.95■□□□□ 0.3
MARK3-209ENST00000555235 CCNG2Q16589 344 aa16.95■□□□□ 0.3
MARK3-209ENST00000555235 OR52E8Q6IFG1 317 aa16.95■□□□□ 0.3
MARK3-209ENST00000555235 CYP4F22Q6NT55 531 aa16.95■□□□□ 0.3
MARK3-209ENST00000555235 XXYLT1Q8NBI6 393 aa16.95■□□□□ 0.3
MARK3-209ENST00000555235 ZSWIM2Q8NEG5 633 aa16.95■□□□□ 0.3
MARK3-209ENST00000555235 SHC3Q92529 594 aa16.95■□□□□ 0.3
MARK3-209ENST00000555235 FAM81BQ96LP2 452 aa16.95■□□□□ 0.3
MARK3-209ENST00000555235 TMEM117Q9H0C3 514 aa16.95■□□□□ 0.3
MARK3-209ENST00000555235 RANBP17Q9H2T7 1088 aaKnown RBP16.95■□□□□ 0.3
MARK3-209ENST00000555235 KIAA1586Q9HCI6 787 aa16.95■□□□□ 0.3
MARK3-209ENST00000555235 HSPBP1Q9NZL4 362 aa16.95■□□□□ 0.3
MARK3-209ENST00000555235 LARSQ9P2J5 1176 aaKnown RBP16.95■□□□□ 0.3
MARK3-209ENST00000555235 ANAPC7Q9UJX3 599 aa16.95■□□□□ 0.3
MARK3-209ENST00000555235 SERPINA10Q9UK55 444 aa16.95■□□□□ 0.3
MARK3-209ENST00000555235 ZNFX1Q9P2E3 1918 aaKnown RBP16.95■□□□□ 0.3
MARK3-209ENST00000555235 SIGLEC16A6NMB1 481 aa16.94■□□□□ 0.3
MARK3-209ENST00000555235 IPO5O00410 1097 aaKnown RBP16.94■□□□□ 0.3
MARK3-209ENST00000555235 ENTPD3O75355 529 aa16.94■□□□□ 0.3
MARK3-209ENST00000555235 CYP11B1P15538 503 aa16.94■□□□□ 0.3
MARK3-209ENST00000555235 CA4P22748 312 aa16.94■□□□□ 0.3
MARK3-209ENST00000555235 MXI1P50539 228 aa16.94■□□□□ 0.3
MARK3-209ENST00000555235 MCCD1P59942 119 aaPredicted RBP16.94■□□□□ 0.3
MARK3-209ENST00000555235 HHATQ5VTY9 493 aa16.94■□□□□ 0.3
MARK3-209ENST00000555235 SNX30Q5VWJ9 437 aa16.94■□□□□ 0.3
MARK3-209ENST00000555235 ACAD10Q6JQN1 1059 aa16.94■□□□□ 0.3
MARK3-209ENST00000555235 CLNKQ7Z7G1 428 aa16.94■□□□□ 0.3
MARK3-209ENST00000555235 KIFAP3Q92845 792 aa16.94■□□□□ 0.3
MARK3-209ENST00000555235 IFT43Q96FT9 208 aa16.94■□□□□ 0.3
MARK3-209ENST00000555235 RIT2Q99578 217 aa16.94■□□□□ 0.3
MARK3-209ENST00000555235 TROVE2P10155 538 aaKnown RBP eCLIP16.94■□□□□ 0.3
MARK3-209ENST00000555235 GCAP28676 217 aa16.94■□□□□ 0.3
MARK3-209ENST00000555235 KHDC1Q4VXA5 237 aaKnown RBP16.94■□□□□ 0.3
MARK3-209ENST00000555235 OTOAQ7RTW8 1153 aa16.94■□□□□ 0.3
MARK3-209ENST00000555235 ANKS1BQ7Z6G8 1248 aa16.94■□□□□ 0.3
MARK3-209ENST00000555235 PPM1KQ8N3J5 372 aa16.94■□□□□ 0.3
MARK3-209ENST00000555235 TRIM4Q9C037 500 aa16.94■□□□□ 0.3
MARK3-209ENST00000555235 ACP6Q9NPH0 428 aa16.94■□□□□ 0.3
MARK3-209ENST00000555235 MRPL11Q9Y3B7 192 aaKnown RBP16.94■□□□□ 0.3
MARK3-209ENST00000555235 RPA3P35244 121 aaPredicted RBP16.93■□□□□ 0.3
MARK3-209ENST00000555235 RCN2Q14257 317 aa16.93■□□□□ 0.3
MARK3-209ENST00000555235 SLC5A9Q2M3M2 681 aa16.93■□□□□ 0.3
MARK3-209ENST00000555235 CTC1Q2NKJ3 1217 aa16.93■□□□□ 0.3
MARK3-209ENST00000555235 SLC27A3Q5K4L6 730 aa16.93■□□□□ 0.3
MARK3-209ENST00000555235 ACER1Q8TDN7 264 aa16.93■□□□□ 0.3
MARK3-209ENST00000555235 MXRA8Q9BRK3 442 aa16.93■□□□□ 0.3
MARK3-209ENST00000555235 TDRD3Q9H7E2 651 aaKnown RBP16.93■□□□□ 0.3
MARK3-209ENST00000555235 GRID1Q9ULK0 1009 aa16.93■□□□□ 0.3
MARK3-209ENST00000555235 PLS3P13797 630 aa16.93■□□□□ 0.3
MARK3-209ENST00000555235 SESN3P58005 492 aa16.93■□□□□ 0.3
MARK3-209ENST00000555235 PTP4A2Q12974 167 aa16.93■□□□□ 0.3
MARK3-209ENST00000555235 KLF1Q13351 362 aaPredicted RBP16.93■□□□□ 0.3
MARK3-209ENST00000555235 RASA2Q15283 850 aa16.93■□□□□ 0.3
MARK3-209ENST00000555235 RCN1Q15293 331 aa16.93■□□□□ 0.3
MARK3-209ENST00000555235 PPP1R15BQ5SWA1 713 aa16.93■□□□□ 0.3
MARK3-209ENST00000555235 RNF220Q5VTB9 566 aa16.93■□□□□ 0.3
MARK3-209ENST00000555235 PRUNE1Q86TP1 453 aa16.93■□□□□ 0.3
MARK3-209ENST00000555235 PPFIBP2Q8ND30 876 aa16.93■□□□□ 0.3
MARK3-209ENST00000555235 MIPEPQ99797 713 aa16.93■□□□□ 0.3
MARK3-209ENST00000555235 BTBD10Q9BSF8 475 aa16.93■□□□□ 0.3
MARK3-209ENST00000555235 PIDD1Q9HB75 910 aa16.93■□□□□ 0.3
MARK3-209ENST00000555235 SSU72Q9NP77 194 aaKnown RBP16.93■□□□□ 0.3
MARK3-209ENST00000555235 ANKFY1Q9P2R3 1169 aa16.93■□□□□ 0.3
MARK3-209ENST00000555235 R3HDM2Q9Y2K5 976 aaKnown RBP16.93■□□□□ 0.3
MARK3-209ENST00000555235 TMX2Q9Y320 296 aa16.93■□□□□ 0.3
MARK3-209ENST00000555235 SLX4Q8IY92 1834 aa16.92■□□□□ 0.3
MARK3-209ENST00000555235 MAP3K13O43283 966 aa16.92■□□□□ 0.3
MARK3-209ENST00000555235 SLC34A1Q06495 639 aa16.92■□□□□ 0.3
MARK3-209ENST00000555235 PKN2Q16513 984 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms