RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 A6NJR5 290 aa12.95□□□□□ -0.34
ARHGEF40-206ENST00000555232 I3L4J1 428 aa12.95□□□□□ -0.34
ARHGEF40-206ENST00000555232 MAP2K7O14733 419 aa12.95□□□□□ -0.34
ARHGEF40-206ENST00000555232 PDGFRAP16234 1089 aa12.95□□□□□ -0.34
ARHGEF40-206ENST00000555232 ZNF200P98182 395 aaPredicted RBP12.95□□□□□ -0.34
ARHGEF40-206ENST00000555232 KRT17Q04695 432 aa12.95□□□□□ -0.34
ARHGEF40-206ENST00000555232 KIF22Q14807 665 aa12.95□□□□□ -0.34
ARHGEF40-206ENST00000555232 FIGNQ5HY92 759 aa12.95□□□□□ -0.34
ARHGEF40-206ENST00000555232 PNMA8AQ86V59 439 aaPredicted RBP12.95□□□□□ -0.34
ARHGEF40-206ENST00000555232 REPS2Q8NFH8 660 aa12.95□□□□□ -0.34
ARHGEF40-206ENST00000555232 UPF1Q92900 1129 aaKnown RBP eCLIP12.95□□□□□ -0.34
ARHGEF40-206ENST00000555232 COMMD10Q9Y6G5 202 aa12.95□□□□□ -0.34
ARHGEF40-206ENST00000555232 TTLL13PA6NNM8 815 aa12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 BTBD19C9JJ37 291 aa12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 OGTO15294 1046 aa12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 DHX15O43143 795 aaKnown RBP12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 SEC24CP53992 1094 aa12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 YWHAEP62258 255 aaKnown RBP12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 IFT88Q13099 833 aa12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 FAM47EQ6ZV65 393 aa12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 LBHD1Q9BQE6 289 aaPredicted RBP12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 GOLGA2P5Q9HBQ8 144 aa12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 GINM1Q9NU53 330 aa12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 XIRP1Q702N8 1843 aaKnown RBP12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 PYGMP11217 842 aa12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 ADSSP30520 456 aa12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 ACTN3Q08043 901 aaPredicted RBP12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 RWDD4Q6NW29 188 aaKnown RBP12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 SRRM1Q8IYB3 904 aaKnown RBP12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 ARFGAP2Q8N6H7 521 aa12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 ZIM3Q96PE6 472 aa12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 PARK7Q99497 189 aaKnown RBP12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 BEGAINQ9BUH8 593 aa12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 METTL5Q9NRN9 209 aaKnown RBP12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 AIPL1Q9NZN9 384 aa12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 MYH6P13533 1939 aa12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 PLIN4Q96Q06 1357 aa12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 HUS1O60921 280 aa12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 NAMPTP43490 491 aa12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 ZNF280AP59817 542 aaPredicted RBP12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 KYNUQ16719 465 aa12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 TMEM192Q8IY95 271 aa12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 C12orf29Q8N999 325 aa12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 MDM1Q8TC05 714 aa12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 ATP8B4Q8TF62 1192 aa12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 KREMEN1Q96MU8 473 aa12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 AGAP3Q96P47 875 aa12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 DNAI2Q9GZS0 605 aa12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 TAF1DQ9H5J8 278 aaPredicted RBP12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 GPBP1L1Q9HC44 474 aaPredicted RBP12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 L1RE1Q9UN81 338 aa12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 KIF1CO43896 1103 aaKnown RBP12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 NR1D1P20393 614 aa12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 ERFP50548 548 aa12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 DGKDQ16760 1214 aa12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 LONRF1Q17RB8 773 aa12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 TDRD10Q5VZ19 366 aaKnown RBP12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 APBB1IPQ7Z5R6 666 aaPredicted RBP12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 PLEKHH3Q7Z736 793 aa12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 SIX6OS1Q8N1H7 587 aa12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 FBXO25Q8TCJ0 367 aa12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 EPS8L1Q8TE68 723 aa12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 CFAP36Q96G28 342 aa12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 ATXN7L3BQ96GX2 97 aa12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 L3MBTL3Q96JM7 780 aaPredicted RBP12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 CEP41Q9BYV8 373 aa12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 NR2E1Q9Y466 385 aa12.94□□□□□ -0.34
ARHGEF40-206ENST00000555232 ATRNL1Q5VV63 1379 aa12.93□□□□□ -0.34
ARHGEF40-206ENST00000555232 BNIP3LO60238 219 aa12.93□□□□□ -0.34
ARHGEF40-206ENST00000555232 ADCY3O60266 1144 aa12.93□□□□□ -0.34
ARHGEF40-206ENST00000555232 TRPA1O75762 1119 aa12.93□□□□□ -0.34
ARHGEF40-206ENST00000555232 FARP2O94887 1054 aaPredicted RBP12.93□□□□□ -0.34
ARHGEF40-206ENST00000555232 LGALS2P05162 132 aa12.93□□□□□ -0.34
ARHGEF40-206ENST00000555232 NFICP08651 508 aa12.93□□□□□ -0.34
ARHGEF40-206ENST00000555232 TMEM253P0C7T8 217 aa12.93□□□□□ -0.34
ARHGEF40-206ENST00000555232 STX2P32856 288 aa12.93□□□□□ -0.34
ARHGEF40-206ENST00000555232 RABGGTBP53611 331 aa12.93□□□□□ -0.34
ARHGEF40-206ENST00000555232 MAPK7Q13164 816 aa12.93□□□□□ -0.34
ARHGEF40-206ENST00000555232 SWT1Q5T5J6 900 aaKnown RBP12.93□□□□□ -0.34
ARHGEF40-206ENST00000555232 MAP4K3Q8IVH8 894 aa12.93□□□□□ -0.34
ARHGEF40-206ENST00000555232 ZNF606Q8WXB4 792 aa12.93□□□□□ -0.34
ARHGEF40-206ENST00000555232 BHMTQ93088 406 aa12.93□□□□□ -0.34
ARHGEF40-206ENST00000555232 C2orf40Q9H1Z8 148 aa12.93□□□□□ -0.34
ARHGEF40-206ENST00000555232 RBPJLQ9UBG7 517 aa12.93□□□□□ -0.34
ARHGEF40-206ENST00000555232 NUDT5Q9UKK9 219 aa12.93□□□□□ -0.34
ARHGEF40-206ENST00000555232 CASTOR2A6NHX0 329 aa12.93□□□□□ -0.34
ARHGEF40-206ENST00000555232 CDR2Q01850 454 aa12.93□□□□□ -0.34
ARHGEF40-206ENST00000555232 PAPD7Q5XG87 772 aaKnown RBP12.93□□□□□ -0.34
ARHGEF40-206ENST00000555232 CCDC125Q86Z20 511 aa12.93□□□□□ -0.34
ARHGEF40-206ENST00000555232 ADAM32Q8TC27 787 aa12.93□□□□□ -0.34
ARHGEF40-206ENST00000555232 PCDHB18PQ96TA0 734 aa12.93□□□□□ -0.34
ARHGEF40-206ENST00000555232 THPOP40225 353 aa12.93□□□□□ -0.34
ARHGEF40-206ENST00000555232 RPL7AP62424 266 aaKnown RBP12.93□□□□□ -0.34
ARHGEF40-206ENST00000555232 NIF3L1Q9GZT8 377 aa12.93□□□□□ -0.34
ARHGEF40-206ENST00000555232 MED4Q9NPJ6 270 aa12.93□□□□□ -0.34
ARHGEF40-206ENST00000555232 KCND1Q9NSA2 647 aa12.93□□□□□ -0.34
ARHGEF40-206ENST00000555232 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.93□□□□□ -0.34
ARHGEF40-206ENST00000555232 SMCHD1A6NHR9 2005 aa12.92□□□□□ -0.34
ARHGEF40-206ENST00000555232 LACTBL1A8MY62 500 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms