RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 MYL6P60660 151 aa17.67■□□□□ 0.42
SPTLC2-203ENST00000554901 FANCCQ00597 558 aa17.67■□□□□ 0.42
SPTLC2-203ENST00000554901 EXOC3L4Q17RC7 722 aa17.67■□□□□ 0.42
SPTLC2-203ENST00000554901 ZNF699Q32M78 642 aa17.67■□□□□ 0.42
SPTLC2-203ENST00000554901 WDR44Q5JSH3 913 aa17.67■□□□□ 0.42
SPTLC2-203ENST00000554901 SMYD5Q6GMV2 418 aa17.67■□□□□ 0.42
SPTLC2-203ENST00000554901 DPH6Q7L8W6 267 aa17.67■□□□□ 0.42
SPTLC2-203ENST00000554901 DDX53Q86TM3 631 aaKnown RBP17.67■□□□□ 0.42
SPTLC2-203ENST00000554901 GPR65Q8IYL9 337 aa17.67■□□□□ 0.42
SPTLC2-203ENST00000554901 C17orf80Q9BSJ5 609 aa17.67■□□□□ 0.42
SPTLC2-203ENST00000554901 FAM124BQ9H5Z6 455 aaPredicted RBP17.67■□□□□ 0.42
SPTLC2-203ENST00000554901 RTN4Q9NQC3 1192 aaKnown RBP17.67■□□□□ 0.42
SPTLC2-203ENST00000554901 PUF60Q9UHX1 559 aaKnown RBP17.67■□□□□ 0.42
SPTLC2-203ENST00000554901 LAMA2P24043 3122 aaKnown RBP17.67■□□□□ 0.42
SPTLC2-203ENST00000554901 M0QZQ0 153 aa17.67■□□□□ 0.42
SPTLC2-203ENST00000554901 SYN3O14994 580 aa17.67■□□□□ 0.42
SPTLC2-203ENST00000554901 TPM3P06753 285 aa17.67■□□□□ 0.42
SPTLC2-203ENST00000554901 FUT10Q6P4F1 479 aa17.67■□□□□ 0.42
SPTLC2-203ENST00000554901 TMEM173Q86WV6 379 aaPredicted RBP17.67■□□□□ 0.42
SPTLC2-203ENST00000554901 RNF168Q8IYW5 571 aaPredicted RBP17.67■□□□□ 0.42
SPTLC2-203ENST00000554901 KLHL23Q8NBE8 558 aa17.67■□□□□ 0.42
SPTLC2-203ENST00000554901 EHBP1Q8NDI1 1231 aa17.67■□□□□ 0.42
SPTLC2-203ENST00000554901 LMO3Q8TAP4 145 aa17.67■□□□□ 0.42
SPTLC2-203ENST00000554901 SPATA18Q8TC71 538 aa17.67■□□□□ 0.42
SPTLC2-203ENST00000554901 RABGGTAQ92696 567 aa17.67■□□□□ 0.42
SPTLC2-203ENST00000554901 SEMA4DQ92854 862 aa17.67■□□□□ 0.42
SPTLC2-203ENST00000554901 GCNT4Q9P109 453 aa17.67■□□□□ 0.42
SPTLC2-203ENST00000554901 SPTLC1O15269 473 aa17.66■□□□□ 0.42
SPTLC2-203ENST00000554901 ITGB1P05556 798 aa17.66■□□□□ 0.42
SPTLC2-203ENST00000554901 UBASH3AP57075 661 aa17.66■□□□□ 0.42
SPTLC2-203ENST00000554901 NOP14P78316 857 aaKnown RBP17.66■□□□□ 0.42
SPTLC2-203ENST00000554901 WDR72Q3MJ13 1102 aa17.66■□□□□ 0.42
SPTLC2-203ENST00000554901 TIGD5Q53EQ6 642 aa17.66■□□□□ 0.42
SPTLC2-203ENST00000554901 ZNF667Q5HYK9 610 aa17.66■□□□□ 0.42
SPTLC2-203ENST00000554901 SARM1Q6SZW1 724 aa17.66■□□□□ 0.42
SPTLC2-203ENST00000554901 DSTYKQ6XUX3 929 aa17.66■□□□□ 0.42
SPTLC2-203ENST00000554901 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.66■□□□□ 0.42
SPTLC2-203ENST00000554901 TMEM130Q8N3G9 435 aa17.66■□□□□ 0.42
SPTLC2-203ENST00000554901 FBXO22Q8NEZ5 403 aa17.66■□□□□ 0.42
SPTLC2-203ENST00000554901 BCL7CQ8WUZ0 217 aaPredicted RBP17.66■□□□□ 0.42
SPTLC2-203ENST00000554901 FAM81BQ96LP2 452 aa17.66■□□□□ 0.42
SPTLC2-203ENST00000554901 ERGIC2Q96RQ1 377 aa17.66■□□□□ 0.42
SPTLC2-203ENST00000554901 DSEQ9UL01 958 aa17.66■□□□□ 0.42
SPTLC2-203ENST00000554901 KIAA1671Q9BY89 1806 aa17.65■□□□□ 0.42
SPTLC2-203ENST00000554901 F8W810 466 aa17.65■□□□□ 0.42
SPTLC2-203ENST00000554901 H3BNC9 293 aa17.65■□□□□ 0.42
SPTLC2-203ENST00000554901 CBFA2T2O43439 604 aa17.65■□□□□ 0.42
SPTLC2-203ENST00000554901 SOD2P04179 222 aa17.65■□□□□ 0.42
SPTLC2-203ENST00000554901 ODC1P11926 461 aa17.65■□□□□ 0.42
SPTLC2-203ENST00000554901 TYMPP19971 482 aa17.65■□□□□ 0.42
SPTLC2-203ENST00000554901 TNNC1P63316 161 aa17.65■□□□□ 0.42
SPTLC2-203ENST00000554901 UBXN1Q04323 297 aa17.65■□□□□ 0.42
SPTLC2-203ENST00000554901 USP41Q3LFD5 358 aa17.65■□□□□ 0.42
SPTLC2-203ENST00000554901 PDXDC1Q6P996 788 aa17.65■□□□□ 0.42
SPTLC2-203ENST00000554901 LIMS2Q7Z4I7 341 aa17.65■□□□□ 0.42
SPTLC2-203ENST00000554901 TOP6BLQ8N6T0 577 aa17.65■□□□□ 0.42
SPTLC2-203ENST00000554901 APPL2Q8NEU8 664 aa17.65■□□□□ 0.42
SPTLC2-203ENST00000554901 HASPINQ8TF76 798 aa17.65■□□□□ 0.42
SPTLC2-203ENST00000554901 SENP8Q96LD8 212 aa17.65■□□□□ 0.42
SPTLC2-203ENST00000554901 NT5C1BQ96P26 610 aa17.65■□□□□ 0.42
SPTLC2-203ENST00000554901 INTS2Q9H0H0 1204 aaKnown RBP17.65■□□□□ 0.42
SPTLC2-203ENST00000554901 PCDHB8Q9UN66 801 aa17.65■□□□□ 0.42
SPTLC2-203ENST00000554901 DAAM1Q9Y4D1 1078 aa17.65■□□□□ 0.42
SPTLC2-203ENST00000554901 LAMA3Q16787 3333 aa17.65■□□□□ 0.42
SPTLC2-203ENST00000554901 NLRC5Q86WI3 1866 aa17.64■□□□□ 0.41
SPTLC2-203ENST00000554901 A0A1W2PQC6 194 aa17.64■□□□□ 0.41
SPTLC2-203ENST00000554901 CYB561D2O14569 222 aa17.64■□□□□ 0.41
SPTLC2-203ENST00000554901 HUS1O60921 280 aa17.64■□□□□ 0.41
SPTLC2-203ENST00000554901 CYP11A1P05108 521 aa17.64■□□□□ 0.41
SPTLC2-203ENST00000554901 FGFR3P22607 806 aa17.64■□□□□ 0.41
SPTLC2-203ENST00000554901 PON1P27169 355 aa17.64■□□□□ 0.41
SPTLC2-203ENST00000554901 NR1I3Q14994 352 aa17.64■□□□□ 0.41
SPTLC2-203ENST00000554901 SCARA3Q6AZY7 606 aa17.64■□□□□ 0.41
SPTLC2-203ENST00000554901 TRIM65Q6PJ69 517 aa17.64■□□□□ 0.41
SPTLC2-203ENST00000554901 TMEM86AQ8N2M4 240 aa17.64■□□□□ 0.41
SPTLC2-203ENST00000554901 HERC2P3Q9BVR0 1158 aa17.64■□□□□ 0.41
SPTLC2-203ENST00000554901 GPR62Q9BZJ7 368 aa17.64■□□□□ 0.41
SPTLC2-203ENST00000554901 NIF3L1Q9GZT8 377 aa17.64■□□□□ 0.41
SPTLC2-203ENST00000554901 LMAN2LQ9H0V9 348 aa17.64■□□□□ 0.41
SPTLC2-203ENST00000554901 CHST7Q9NS84 486 aa17.64■□□□□ 0.41
SPTLC2-203ENST00000554901 SSX2IPQ9Y2D8 614 aa17.64■□□□□ 0.41
SPTLC2-203ENST00000554901 SNX9Q9Y5X1 595 aa17.64■□□□□ 0.41
SPTLC2-203ENST00000554901 SCN1AP35498 2009 aa17.64■□□□□ 0.41
SPTLC2-203ENST00000554901 TACC1O75410 805 aa17.63■□□□□ 0.41
SPTLC2-203ENST00000554901 RFX1P22670 979 aa17.63■□□□□ 0.41
SPTLC2-203ENST00000554901 TBXAS1P24557 533 aaPredicted RBP17.63■□□□□ 0.41
SPTLC2-203ENST00000554901 IGFBP6P24592 240 aaPredicted RBP17.63■□□□□ 0.41
SPTLC2-203ENST00000554901 BRCC3P46736 316 aa17.63■□□□□ 0.41
SPTLC2-203ENST00000554901 BMS1Q14692 1282 aaKnown RBP17.63■□□□□ 0.41
SPTLC2-203ENST00000554901 FAM171A1Q5VUB5 890 aa17.63■□□□□ 0.41
SPTLC2-203ENST00000554901 PDE12Q6L8Q7 609 aaKnown RBP17.63■□□□□ 0.41
SPTLC2-203ENST00000554901 GPR153Q6NV75 609 aa17.63■□□□□ 0.41
SPTLC2-203ENST00000554901 TTC39CQ8N584 583 aa17.63■□□□□ 0.41
SPTLC2-203ENST00000554901 SPPL3Q8TCT6 385 aa17.63■□□□□ 0.41
SPTLC2-203ENST00000554901 NAP1L5Q96NT1 182 aaPredicted RBP17.63■□□□□ 0.41
SPTLC2-203ENST00000554901 CRACR2AQ9BSW2 395 aa17.63■□□□□ 0.41
SPTLC2-203ENST00000554901 PI4K2AQ9BTU6 479 aa17.63■□□□□ 0.41
SPTLC2-203ENST00000554901 OXCT2Q9BYC2 517 aaPredicted RBP17.63■□□□□ 0.41
SPTLC2-203ENST00000554901 ZNF576Q9H609 170 aa17.63■□□□□ 0.41
SPTLC2-203ENST00000554901 CYP3A43Q9HB55 503 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms