RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 NOVP48745 357 aa4.9□□□□□ -1.63
VTI1B-203ENST00000554636 CCNA1P78396 465 aa4.9□□□□□ -1.63
VTI1B-203ENST00000554636 GUCY1A3Q02108 690 aa4.9□□□□□ -1.63
VTI1B-203ENST00000554636 COG2Q14746 738 aa4.9□□□□□ -1.63
VTI1B-203ENST00000554636 TMEM132BQ14DG7 1078 aa4.9□□□□□ -1.63
VTI1B-203ENST00000554636 ALX1Q15699 326 aa4.9□□□□□ -1.63
VTI1B-203ENST00000554636 CCL14Q16627 93 aa4.9□□□□□ -1.63
VTI1B-203ENST00000554636 PAN2Q504Q3 1202 aaKnown RBP4.9□□□□□ -1.63
VTI1B-203ENST00000554636 PRR31Q5SQ13 230 aa4.9□□□□□ -1.63
VTI1B-203ENST00000554636 FAM83BQ5T0W9 1011 aa4.9□□□□□ -1.63
VTI1B-203ENST00000554636 TRMT10BQ6PF06 316 aaKnown RBP4.9□□□□□ -1.63
VTI1B-203ENST00000554636 DPH6Q7L8W6 267 aa4.9□□□□□ -1.63
VTI1B-203ENST00000554636 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.9□□□□□ -1.63
VTI1B-203ENST00000554636 TICAM2Q86XR7 235 aa4.9□□□□□ -1.63
VTI1B-203ENST00000554636 MB21D1Q8N884 522 aa4.9□□□□□ -1.63
VTI1B-203ENST00000554636 SHCBP1Q8NEM2 672 aa4.9□□□□□ -1.63
VTI1B-203ENST00000554636 UHMK1Q8TAS1 419 aaKnown RBP4.9□□□□□ -1.63
VTI1B-203ENST00000554636 ZCCHC14Q8WYQ9 949 aaKnown RBP4.9□□□□□ -1.63
VTI1B-203ENST00000554636 CEP95Q96GE4 821 aa4.9□□□□□ -1.63
VTI1B-203ENST00000554636 DEFB118Q96PH6 123 aa4.9□□□□□ -1.63
VTI1B-203ENST00000554636 TMEM209Q96SK2 561 aa4.9□□□□□ -1.63
VTI1B-203ENST00000554636 NUP88Q99567 741 aaPredicted RBP4.9□□□□□ -1.63
VTI1B-203ENST00000554636 NACAP1Q9BZK3 213 aa4.9□□□□□ -1.63
VTI1B-203ENST00000554636 SPATC1LQ9H0A9 340 aa4.9□□□□□ -1.63
VTI1B-203ENST00000554636 RWDD1Q9H446 243 aaPredicted RBP4.9□□□□□ -1.63
VTI1B-203ENST00000554636 HELLSQ9NRZ9 838 aa4.9□□□□□ -1.63
VTI1B-203ENST00000554636 CATSPERZQ9NTU4 200 aa4.9□□□□□ -1.63
VTI1B-203ENST00000554636 FLRT1Q9NZU1 646 aa4.9□□□□□ -1.63
VTI1B-203ENST00000554636 NYAP2Q9P242 653 aa4.9□□□□□ -1.63
VTI1B-203ENST00000554636 ANAPC4Q9UJX5 808 aa4.9□□□□□ -1.63
VTI1B-203ENST00000554636 SYNPO2Q9UMS6 1093 aa4.9□□□□□ -1.63
VTI1B-203ENST00000554636 ADAMTS5Q9UNA0 930 aa4.9□□□□□ -1.63
VTI1B-203ENST00000554636 INVSQ9Y283 1065 aa4.9□□□□□ -1.63
VTI1B-203ENST00000554636 CCDC171Q6TFL3 1326 aa4.9□□□□□ -1.63
VTI1B-203ENST00000554636 PLXNA1Q9UIW2 1896 aa4.9□□□□□ -1.63
VTI1B-203ENST00000554636 TRIOBPQ9H2D6 2365 aa4.89□□□□□ -1.63
VTI1B-203ENST00000554636 SLC15A5A6NIM6 579 aa4.89□□□□□ -1.63
VTI1B-203ENST00000554636 F5H6K3 240 aa4.89□□□□□ -1.63
VTI1B-203ENST00000554636 VWA5AO00534 786 aa4.89□□□□□ -1.63
VTI1B-203ENST00000554636 AQP7O14520 342 aa4.89□□□□□ -1.63
VTI1B-203ENST00000554636 ORC4O43929 436 aa4.89□□□□□ -1.63
VTI1B-203ENST00000554636 TTLL1O95922 423 aa4.89□□□□□ -1.63
VTI1B-203ENST00000554636 APPP05067 770 aa4.89□□□□□ -1.63
VTI1B-203ENST00000554636 C6orf222P0C671 652 aaPredicted RBP4.89□□□□□ -1.63
VTI1B-203ENST00000554636 HSPD1P10809 573 aaKnown RBP4.89□□□□□ -1.63
VTI1B-203ENST00000554636 PYGMP11217 842 aa4.89□□□□□ -1.63
VTI1B-203ENST00000554636 GSPT1P15170 499 aaKnown RBP4.89□□□□□ -1.63
VTI1B-203ENST00000554636 ZKSCAN1P17029 563 aaPredicted RBP4.89□□□□□ -1.63
VTI1B-203ENST00000554636 ZNF28P17035 718 aa4.89□□□□□ -1.63
VTI1B-203ENST00000554636 SDSP20132 328 aa4.89□□□□□ -1.63
VTI1B-203ENST00000554636 ADORA2AP29274 412 aa4.89□□□□□ -1.63
VTI1B-203ENST00000554636 CCND3P30281 292 aaPredicted RBP4.89□□□□□ -1.63
VTI1B-203ENST00000554636 IRX6P78412 446 aaPredicted RBP4.89□□□□□ -1.63
VTI1B-203ENST00000554636 KLRC3Q07444 240 aa4.89□□□□□ -1.63
VTI1B-203ENST00000554636 PAK1Q13153 545 aa4.89□□□□□ -1.63
VTI1B-203ENST00000554636 SERINC3Q13530 473 aa4.89□□□□□ -1.63
VTI1B-203ENST00000554636 MCMDC2Q4G0Z9 681 aa4.89□□□□□ -1.63
VTI1B-203ENST00000554636 FAM47AQ5JRC9 791 aa4.89□□□□□ -1.63
VTI1B-203ENST00000554636 FAM26FQ5R3K3 315 aa4.89□□□□□ -1.63
VTI1B-203ENST00000554636 KCTD1Q719H9 257 aa4.89□□□□□ -1.63
VTI1B-203ENST00000554636 RASGRP2Q7LDG7 609 aa4.89□□□□□ -1.63
VTI1B-203ENST00000554636 MAMDC2Q7Z304 686 aaPredicted RBP4.89□□□□□ -1.63
VTI1B-203ENST00000554636 FAM124AQ86V42 546 aa4.89□□□□□ -1.63
VTI1B-203ENST00000554636 PROSER1Q86XN7 944 aa4.89□□□□□ -1.63
VTI1B-203ENST00000554636 TBC1D10CQ8IV04 446 aa4.89□□□□□ -1.63
VTI1B-203ENST00000554636 ZNF444Q8N0Y2 327 aaPredicted RBP4.89□□□□□ -1.63
VTI1B-203ENST00000554636 GMCL1P1Q8NEA9 526 aa4.89□□□□□ -1.63
VTI1B-203ENST00000554636 DIS3LQ8TF46 1054 aaKnown RBP4.89□□□□□ -1.63
VTI1B-203ENST00000554636 PTPRN2Q92932 1015 aa4.89□□□□□ -1.63
VTI1B-203ENST00000554636 MKL1Q969V6 931 aa4.89□□□□□ -1.63
VTI1B-203ENST00000554636 DNAJC7Q99615 494 aa4.89□□□□□ -1.63
VTI1B-203ENST00000554636 SLF1Q9BQI6 1058 aa4.89□□□□□ -1.63
VTI1B-203ENST00000554636 IL25Q9H293 177 aa4.89□□□□□ -1.63
VTI1B-203ENST00000554636 ZNF287Q9HBT7 754 aa4.89□□□□□ -1.63
VTI1B-203ENST00000554636 INCENPQ9NQS7 918 aa4.89□□□□□ -1.63
VTI1B-203ENST00000554636 MTMR4Q9NYA4 1195 aa4.89□□□□□ -1.63
VTI1B-203ENST00000554636 HOXC10Q9NYD6 342 aa4.89□□□□□ -1.63
VTI1B-203ENST00000554636 FTSJ1Q9UET6 329 aa4.89□□□□□ -1.63
VTI1B-203ENST00000554636 NDOR1Q9UHB4 597 aa4.89□□□□□ -1.63
VTI1B-203ENST00000554636 OGDHLQ9ULD0 1010 aa4.89□□□□□ -1.63
VTI1B-203ENST00000554636 MRPS23Q9Y3D9 190 aaKnown RBP4.89□□□□□ -1.63
VTI1B-203ENST00000554636 PCDHA9Q9Y5H5 950 aa4.89□□□□□ -1.63
VTI1B-203ENST00000554636 ZNF536O15090 1300 aa4.89□□□□□ -1.63
VTI1B-203ENST00000554636 RPTORQ8N122 1335 aa4.89□□□□□ -1.63
VTI1B-203ENST00000554636 SMCHD1A6NHR9 2005 aa4.89□□□□□ -1.63
VTI1B-203ENST00000554636 LRRC37A2A6NM11 1700 aa4.89□□□□□ -1.63
VTI1B-203ENST00000554636 LCTP09848 1927 aa4.88□□□□□ -1.63
VTI1B-203ENST00000554636 MCM3APO60318 1980 aa4.88□□□□□ -1.63
VTI1B-203ENST00000554636 K7ESM1 405 aa4.88□□□□□ -1.63
VTI1B-203ENST00000554636 NMT2O60551 498 aa4.88□□□□□ -1.63
VTI1B-203ENST00000554636 FBXO21O94952 628 aa4.88□□□□□ -1.63
VTI1B-203ENST00000554636 FGAP02671 866 aa4.88□□□□□ -1.63
VTI1B-203ENST00000554636 CKMP06732 381 aa4.88□□□□□ -1.63
VTI1B-203ENST00000554636 SLC3A2P08195 630 aaKnown RBP4.88□□□□□ -1.63
VTI1B-203ENST00000554636 TSPY3P0CV98 308 aa4.88□□□□□ -1.63
VTI1B-203ENST00000554636 TSPY8P0CW00 308 aa4.88□□□□□ -1.63
VTI1B-203ENST00000554636 CYBAP13498 195 aa4.88□□□□□ -1.63
VTI1B-203ENST00000554636 FAHP16930 419 aa4.88□□□□□ -1.63
VTI1B-203ENST00000554636 CAPN2P17655 700 aa4.88□□□□□ -1.63
VTI1B-203ENST00000554636 DNM2P50570 870 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms