RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 RICTORQ6R327 1708 aa6.19□□□□□ -1.42
ATXN3-225ENST00000554214 CDHR4A6H8M9 788 aa6.19□□□□□ -1.42
ATXN3-225ENST00000554214 GRM6O15303 877 aa6.19□□□□□ -1.42
ATXN3-225ENST00000554214 SBK3P0C264 359 aa6.19□□□□□ -1.42
ATXN3-225ENST00000554214 MTHFD1P11586 935 aaKnown RBP6.19□□□□□ -1.42
ATXN3-225ENST00000554214 PROZP22891 400 aa6.19□□□□□ -1.42
ATXN3-225ENST00000554214 ADKP55263 362 aaKnown RBP6.19□□□□□ -1.42
ATXN3-225ENST00000554214 ZNF280AP59817 542 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-225ENST00000554214 NOMO3P69849 1222 aa6.19□□□□□ -1.42
ATXN3-225ENST00000554214 BRDTQ58F21 947 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-225ENST00000554214 NOMO2Q5JPE7 1267 aa6.19□□□□□ -1.42
ATXN3-225ENST00000554214 HECTD2Q5U5R9 776 aa6.19□□□□□ -1.42
ATXN3-225ENST00000554214 ABHD17BQ5VST6 288 aa6.19□□□□□ -1.42
ATXN3-225ENST00000554214 GADL1Q6ZQY3 521 aa6.19□□□□□ -1.42
ATXN3-225ENST00000554214 BEND2Q8NDZ0 799 aa6.19□□□□□ -1.42
ATXN3-225ENST00000554214 NUP133Q8WUM0 1156 aa6.19□□□□□ -1.42
ATXN3-225ENST00000554214 RNF31Q96EP0 1072 aa6.19□□□□□ -1.42
ATXN3-225ENST00000554214 BOD1Q96IK1 185 aa6.19□□□□□ -1.42
ATXN3-225ENST00000554214 DMRTA2Q96SC8 542 aa6.19□□□□□ -1.42
ATXN3-225ENST00000554214 BRINP2Q9C0B6 783 aa6.19□□□□□ -1.42
ATXN3-225ENST00000554214 TOR3AQ9H497 397 aa6.19□□□□□ -1.42
ATXN3-225ENST00000554214 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-225ENST00000554214 USP25Q9UHP3 1055 aa6.19□□□□□ -1.42
ATXN3-225ENST00000554214 SERPINB13Q9UIV8 391 aa6.19□□□□□ -1.42
ATXN3-225ENST00000554214 MTO1Q9Y2Z2 717 aaKnown RBP6.19□□□□□ -1.42
ATXN3-225ENST00000554214 RPLP2P05387 115 aaKnown RBP6.18□□□□□ -1.42
ATXN3-225ENST00000554214 EGR2P11161 476 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-225ENST00000554214 SLC6A4P31645 630 aa6.18□□□□□ -1.42
ATXN3-225ENST00000554214 CXADRP78310 365 aa6.18□□□□□ -1.42
ATXN3-225ENST00000554214 RAB39AQ14964 217 aa6.18□□□□□ -1.42
ATXN3-225ENST00000554214 SMN1Q16637 294 aaKnown RBP6.18□□□□□ -1.42
ATXN3-225ENST00000554214 PABPC1LQ4VXU2 614 aaKnown RBP6.18□□□□□ -1.42
ATXN3-225ENST00000554214 Q6YL49 198 aa6.18□□□□□ -1.42
ATXN3-225ENST00000554214 MIER2Q8N344 545 aa6.18□□□□□ -1.42
ATXN3-225ENST00000554214 IL17RDQ8NFM7 739 aa6.18□□□□□ -1.42
ATXN3-225ENST00000554214 ASB10Q8WXI3 467 aa6.18□□□□□ -1.42
ATXN3-225ENST00000554214 CAVIN3Q969G5 261 aa6.18□□□□□ -1.42
ATXN3-225ENST00000554214 GPATCH3Q96I76 525 aa6.18□□□□□ -1.42
ATXN3-225ENST00000554214 MRGPRX4Q96LA9 322 aa6.18□□□□□ -1.42
ATXN3-225ENST00000554214 PNKPQ96T60 521 aa6.18□□□□□ -1.42
ATXN3-225ENST00000554214 GALNT9Q9HCQ5 603 aa6.18□□□□□ -1.42
ATXN3-225ENST00000554214 SYBUQ9NX95 663 aa6.18□□□□□ -1.42
ATXN3-225ENST00000554214 NOP58Q9Y2X3 529 aaKnown RBP6.18□□□□□ -1.42
ATXN3-225ENST00000554214 ERN1O75460 977 aaKnown RBP6.17□□□□□ -1.42
ATXN3-225ENST00000554214 SNUPNO95149 360 aaKnown RBP6.17□□□□□ -1.42
ATXN3-225ENST00000554214 HKR1P10072 659 aa6.17□□□□□ -1.42
ATXN3-225ENST00000554214 ITGAMP11215 1152 aa6.17□□□□□ -1.42
ATXN3-225ENST00000554214 RECQLP46063 649 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-225ENST00000554214 AVPR1BP47901 424 aa6.17□□□□□ -1.42
ATXN3-225ENST00000554214 INHBEP58166 350 aa6.17□□□□□ -1.42
ATXN3-225ENST00000554214 UTP14CQ5TAP6 766 aaKnown RBP6.17□□□□□ -1.42
ATXN3-225ENST00000554214 GPR149Q86SP6 731 aa6.17□□□□□ -1.42
ATXN3-225ENST00000554214 TTC7BQ86TV6 843 aa6.17□□□□□ -1.42
ATXN3-225ENST00000554214 NACC2Q96BF6 587 aa6.17□□□□□ -1.42
ATXN3-225ENST00000554214 ZG16BQ96DA0 208 aa6.17□□□□□ -1.42
ATXN3-225ENST00000554214 TMEM74BQ9NUR3 256 aa6.17□□□□□ -1.42
ATXN3-225ENST00000554214 CALCOCO1Q9P1Z2 691 aa6.17□□□□□ -1.42
ATXN3-225ENST00000554214 HSFX1Q9UBD0 423 aa6.17□□□□□ -1.42
ATXN3-225ENST00000554214 TESQ9UGI8 421 aaKnown RBP6.17□□□□□ -1.42
ATXN3-225ENST00000554214 EPN1Q9Y6I3 576 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-225ENST00000554214 PREX1Q8TCU6 1659 aa6.17□□□□□ -1.42
ATXN3-225ENST00000554214 NEO1Q92859 1461 aa6.16□□□□□ -1.42
ATXN3-225ENST00000554214 HAUS5O94927 633 aa6.16□□□□□ -1.42
ATXN3-225ENST00000554214 AGFG2O95081 481 aa6.16□□□□□ -1.42
ATXN3-225ENST00000554214 BLOC1S1P78537 153 aa6.16□□□□□ -1.42
ATXN3-225ENST00000554214 DSC2Q02487 901 aa6.16□□□□□ -1.42
ATXN3-225ENST00000554214 COL10A1Q03692 680 aa6.16□□□□□ -1.42
ATXN3-225ENST00000554214 TLE1Q04724 770 aa6.16□□□□□ -1.42
ATXN3-225ENST00000554214 CYP2A13Q16696 494 aa6.16□□□□□ -1.42
ATXN3-225ENST00000554214 KRTAP15-1Q3LI76 137 aa6.16□□□□□ -1.42
ATXN3-225ENST00000554214 KHDC1Q4VXA5 237 aaKnown RBP6.16□□□□□ -1.42
ATXN3-225ENST00000554214 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-225ENST00000554214 FAM177A1Q8N128 213 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-225ENST00000554214 LINC00476Q8WZB0 136 aa6.16□□□□□ -1.42
ATXN3-225ENST00000554214 COQ10AQ96MF6 247 aa6.16□□□□□ -1.42
ATXN3-225ENST00000554214 VRK1Q99986 396 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-225ENST00000554214 KCNE5Q9UJ90 142 aa6.16□□□□□ -1.42
ATXN3-225ENST00000554214 CFAP20Q9Y6A4 193 aaKnown RBP6.16□□□□□ -1.42
ATXN3-225ENST00000554214 DENND4BO75064 1496 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-225ENST00000554214 TTC37Q6PGP7 1564 aa6.15□□□□□ -1.42
ATXN3-225ENST00000554214 HECW1Q76N89 1606 aa6.15□□□□□ -1.42
ATXN3-225ENST00000554214 ZRANB2O95218 330 aaKnown RBP eCLIP6.15□□□□□ -1.42
ATXN3-225ENST00000554214 FCER1AP12319 257 aa6.15□□□□□ -1.42
ATXN3-225ENST00000554214 TGM1P22735 817 aa6.15□□□□□ -1.42
ATXN3-225ENST00000554214 SLFN5Q08AF3 891 aa6.15□□□□□ -1.42
ATXN3-225ENST00000554214 SCAPQ12770 1279 aa6.15□□□□□ -1.42
ATXN3-225ENST00000554214 FOXI1Q12951 378 aa6.15□□□□□ -1.42
ATXN3-225ENST00000554214 NSUN6Q8TEA1 469 aaKnown RBP6.15□□□□□ -1.42
ATXN3-225ENST00000554214 Q96MF0 132 aa6.15□□□□□ -1.42
ATXN3-225ENST00000554214 MED15Q96RN5 788 aa6.15□□□□□ -1.42
ATXN3-225ENST00000554214 PACSIN1Q9BY11 444 aa6.15□□□□□ -1.42
ATXN3-225ENST00000554214 MAN1C1Q9NR34 630 aa6.15□□□□□ -1.42
ATXN3-225ENST00000554214 TBCCD1Q9NVR7 557 aa6.15□□□□□ -1.42
ATXN3-225ENST00000554214 JKAMPQ9P055 326 aa6.15□□□□□ -1.42
ATXN3-225ENST00000554214 AKNAQ7Z591 1439 aa6.15□□□□□ -1.43
ATXN3-225ENST00000554214 FANCAO15360 1455 aa6.15□□□□□ -1.43
ATXN3-225ENST00000554214 ZFYVE16Q7Z3T8 1539 aa6.15□□□□□ -1.43
ATXN3-225ENST00000554214 LTBP4Q8N2S1 1624 aa6.14□□□□□ -1.43
ATXN3-225ENST00000554214 MYADML2A6NDP7 307 aa6.14□□□□□ -1.43
ATXN3-225ENST00000554214 SLC43A1O75387 559 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms