RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 LLPHQ9BRT6 129 aaKnown RBP9.64□□□□□ -0.87
TDP1-208ENST00000553989 TRMT61BQ9BVS5 477 aaKnown RBP9.64□□□□□ -0.87
TDP1-208ENST00000553989 PLA2G2FQ9BZM2 168 aa9.64□□□□□ -0.87
TDP1-208ENST00000553989 TMEM134Q9H6X4 195 aa9.64□□□□□ -0.87
TDP1-208ENST00000553989 SH2B1Q9NRF2 756 aaPredicted RBP9.64□□□□□ -0.87
TDP1-208ENST00000553989 ZSCAN32Q9NX65 697 aa9.64□□□□□ -0.87
TDP1-208ENST00000553989 FBXL5Q9UKA1 691 aa9.64□□□□□ -0.87
TDP1-208ENST00000553989 GMEB2Q9UKD1 530 aa9.64□□□□□ -0.87
TDP1-208ENST00000553989 USP18Q9UMW8 372 aa9.64□□□□□ -0.87
TDP1-208ENST00000553989 SMG5Q9UPR3 1016 aaKnown RBP9.64□□□□□ -0.87
TDP1-208ENST00000553989 PP2D1A8MPX8 630 aa9.63□□□□□ -0.87
TDP1-208ENST00000553989 MAN2B1O00754 1011 aa9.63□□□□□ -0.87
TDP1-208ENST00000553989 SLC16A4O15374 487 aa9.63□□□□□ -0.87
TDP1-208ENST00000553989 ABLIM3O94929 683 aa9.63□□□□□ -0.87
TDP1-208ENST00000553989 GDI1P31150 447 aa9.63□□□□□ -0.87
TDP1-208ENST00000553989 RPL9P32969 192 aaKnown RBP9.63□□□□□ -0.87
TDP1-208ENST00000553989 RAD51AP2Q09MP3 1159 aa9.63□□□□□ -0.87
TDP1-208ENST00000553989 TWF1Q12792 350 aa9.63□□□□□ -0.87
TDP1-208ENST00000553989 PTGDRQ13258 359 aa9.63□□□□□ -0.87
TDP1-208ENST00000553989 NOLC1Q14978 699 aaKnown RBP eCLIP9.63□□□□□ -0.87
TDP1-208ENST00000553989 SEZ6Q53EL9 994 aa9.63□□□□□ -0.87
TDP1-208ENST00000553989 FAM78AQ5JUQ0 283 aa9.63□□□□□ -0.87
TDP1-208ENST00000553989 PRSS36Q5K4E3 855 aa9.63□□□□□ -0.87
TDP1-208ENST00000553989 TPGS2Q68CL5 300 aa9.63□□□□□ -0.87
TDP1-208ENST00000553989 TCEAL8Q8IYN2 117 aa9.63□□□□□ -0.87
TDP1-208ENST00000553989 FBXO18Q8NFZ0 1043 aa9.63□□□□□ -0.87
TDP1-208ENST00000553989 FAM3CQ92520 227 aa9.63□□□□□ -0.87
TDP1-208ENST00000553989 IRF7Q92985 503 aa9.63□□□□□ -0.87
TDP1-208ENST00000553989 C18orf25Q96B23 403 aaPredicted RBP9.63□□□□□ -0.87
TDP1-208ENST00000553989 BORCS6Q96GS4 357 aa9.63□□□□□ -0.87
TDP1-208ENST00000553989 ZMAT2Q96NC0 199 aaKnown RBP9.63□□□□□ -0.87
TDP1-208ENST00000553989 RUSC1Q9BVN2 902 aa9.63□□□□□ -0.87
TDP1-208ENST00000553989 AVENQ9NQS1 362 aaPredicted RBP9.63□□□□□ -0.87
TDP1-208ENST00000553989 ASAH2Q9NR71 780 aa9.63□□□□□ -0.87
TDP1-208ENST00000553989 CNTN3Q9P232 1028 aa9.63□□□□□ -0.87
TDP1-208ENST00000553989 ARHGAP28Q9P2N2 729 aa9.63□□□□□ -0.87
TDP1-208ENST00000553989 RAB23Q9ULC3 237 aa9.63□□□□□ -0.87
TDP1-208ENST00000553989 CACNA1IQ9P0X4 2223 aa9.63□□□□□ -0.87
TDP1-208ENST00000553989 SFI1A8K8P3 1242 aa9.62□□□□□ -0.87
TDP1-208ENST00000553989 SEC24AO95486 1093 aa9.62□□□□□ -0.87
TDP1-208ENST00000553989 KCNE1P15382 129 aa9.62□□□□□ -0.87
TDP1-208ENST00000553989 GJA1P17302 382 aa9.62□□□□□ -0.87
TDP1-208ENST00000553989 PSMC3P17980 439 aa9.62□□□□□ -0.87
TDP1-208ENST00000553989 CDC25AP30304 524 aa9.62□□□□□ -0.87
TDP1-208ENST00000553989 RPS9P46781 194 aaKnown RBP9.62□□□□□ -0.87
TDP1-208ENST00000553989 SMTNP53814 917 aa9.62□□□□□ -0.87
TDP1-208ENST00000553989 YWHAHQ04917 246 aaPredicted RBP9.62□□□□□ -0.87
TDP1-208ENST00000553989 MTAPQ13126 283 aa9.62□□□□□ -0.87
TDP1-208ENST00000553989 PDIA5Q14554 519 aa9.62□□□□□ -0.87
TDP1-208ENST00000553989 XKR4Q5GH76 650 aa9.62□□□□□ -0.87
TDP1-208ENST00000553989 RINT1Q6NUQ1 792 aa9.62□□□□□ -0.87
TDP1-208ENST00000553989 ALKAL1Q6UXT8 129 aa9.62□□□□□ -0.87
TDP1-208ENST00000553989 DTHD1Q6ZMT9 781 aa9.62□□□□□ -0.87
TDP1-208ENST00000553989 TAS1R3Q7RTX0 852 aa9.62□□□□□ -0.87
TDP1-208ENST00000553989 USP37Q86T82 979 aa9.62□□□□□ -0.87
TDP1-208ENST00000553989 YAF2Q8IY57 180 aa9.62□□□□□ -0.87
TDP1-208ENST00000553989 DAW1Q8N136 415 aa9.62□□□□□ -0.87
TDP1-208ENST00000553989 GPR161Q8N6U8 529 aaKnown RBP9.62□□□□□ -0.87
TDP1-208ENST00000553989 IGSF22Q8N9C0 903 aa9.62□□□□□ -0.87
TDP1-208ENST00000553989 LEMD2Q8NC56 503 aa9.62□□□□□ -0.87
TDP1-208ENST00000553989 ZSCAN18Q8TBC5 510 aaPredicted RBP9.62□□□□□ -0.87
TDP1-208ENST00000553989 CSGALNACT1Q8TDX6 532 aa9.62□□□□□ -0.87
TDP1-208ENST00000553989 DDX12PQ92771 950 aa9.62□□□□□ -0.87
TDP1-208ENST00000553989 SMARCD2Q92925 531 aa9.62□□□□□ -0.87
TDP1-208ENST00000553989 CLDN23Q96B33 292 aa9.62□□□□□ -0.87
TDP1-208ENST00000553989 CDK5RAP3Q96JB5 506 aa9.62□□□□□ -0.87
TDP1-208ENST00000553989 ZBTB45Q96K62 511 aaPredicted RBP9.62□□□□□ -0.87
TDP1-208ENST00000553989 SUSD3Q96L08 255 aa9.62□□□□□ -0.87
TDP1-208ENST00000553989 ASB16Q96NS5 453 aa9.62□□□□□ -0.87
TDP1-208ENST00000553989 C17orf75Q9HAS0 396 aa9.62□□□□□ -0.87
TDP1-208ENST00000553989 PTPRHQ9HD43 1115 aa9.62□□□□□ -0.87
TDP1-208ENST00000553989 TUBGCP4Q9UGJ1 667 aa9.62□□□□□ -0.87
TDP1-208ENST00000553989 AFF4Q9UHB7 1163 aaKnown RBP9.62□□□□□ -0.87
TDP1-208ENST00000553989 CDV3Q9UKY7 258 aaKnown RBP9.62□□□□□ -0.87
TDP1-208ENST00000553989 PCDHB6Q9Y5E3 794 aa9.62□□□□□ -0.87
TDP1-208ENST00000553989 PIAS3Q9Y6X2 628 aa9.62□□□□□ -0.87
TDP1-208ENST00000553989 PATJQ8NI35 1801 aa9.61□□□□□ -0.87
TDP1-208ENST00000553989 TRIP11Q15643 1979 aa9.61□□□□□ -0.87
TDP1-208ENST00000553989 LAD1O00515 517 aa9.61□□□□□ -0.87
TDP1-208ENST00000553989 ZNF263O14978 683 aa9.61□□□□□ -0.87
TDP1-208ENST00000553989 CLDN3O15551 220 aa9.61□□□□□ -0.87
TDP1-208ENST00000553989 TOM1L1O75674 476 aa9.61□□□□□ -0.87
TDP1-208ENST00000553989 MICAL2O94851 1124 aa9.61□□□□□ -0.87
TDP1-208ENST00000553989 TPM2P07951 284 aa9.61□□□□□ -0.87
TDP1-208ENST00000553989 CXCL8P10145 99 aa9.61□□□□□ -0.87
TDP1-208ENST00000553989 PDCP20941 246 aa9.61□□□□□ -0.87
TDP1-208ENST00000553989 SDHBP21912 280 aa9.61□□□□□ -0.87
TDP1-208ENST00000553989 PROZP22891 400 aa9.61□□□□□ -0.87
TDP1-208ENST00000553989 FCARP24071 287 aa9.61□□□□□ -0.87
TDP1-208ENST00000553989 MSNP26038 577 aaKnown RBP9.61□□□□□ -0.87
TDP1-208ENST00000553989 VIPR2P41587 438 aa9.61□□□□□ -0.87
TDP1-208ENST00000553989 CCR2P41597 374 aa9.61□□□□□ -0.87
TDP1-208ENST00000553989 CCR3P51677 355 aa9.61□□□□□ -0.87
TDP1-208ENST00000553989 NRLP54845 237 aa9.61□□□□□ -0.87
TDP1-208ENST00000553989 LMNB2Q03252 620 aa9.61□□□□□ -0.87
TDP1-208ENST00000553989 PPP2R3AQ06190 1150 aa9.61□□□□□ -0.87
TDP1-208ENST00000553989 SPAG1Q07617 926 aa9.61□□□□□ -0.87
TDP1-208ENST00000553989 PLD1Q13393 1074 aa9.61□□□□□ -0.87
TDP1-208ENST00000553989 TEAD2Q15562 447 aa9.61□□□□□ -0.87
TDP1-208ENST00000553989 LPAL2Q16609 132 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms