RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 PODXLO00592 558 aa9.04□□□□□ -0.96
PSEN1-209ENST00000553855 ABLIM1O14639 778 aa9.04□□□□□ -0.96
PSEN1-209ENST00000553855 KINO60870 393 aaKnown RBP9.04□□□□□ -0.96
PSEN1-209ENST00000553855 SMC2O95347 1197 aa9.04□□□□□ -0.96
PSEN1-209ENST00000553855 CYP3A5P20815 502 aa9.04□□□□□ -0.96
PSEN1-209ENST00000553855 PAX3P23760 479 aa9.04□□□□□ -0.96
PSEN1-209ENST00000553855 MCM4P33991 863 aa9.04□□□□□ -0.96
PSEN1-209ENST00000553855 CLCNKBP51801 687 aa9.04□□□□□ -0.96
PSEN1-209ENST00000553855 MARSP56192 900 aaKnown RBP9.04□□□□□ -0.96
PSEN1-209ENST00000553855 ADAM15Q13444 863 aa9.04□□□□□ -0.96
PSEN1-209ENST00000553855 CUL4BQ13620 913 aa9.04□□□□□ -0.96
PSEN1-209ENST00000553855 CAMK1Q14012 370 aa9.04□□□□□ -0.96
PSEN1-209ENST00000553855 TMEM132DQ14C87 1099 aa9.04□□□□□ -0.96
PSEN1-209ENST00000553855 SURF1Q15526 300 aa9.04□□□□□ -0.96
PSEN1-209ENST00000553855 DUSP6Q16828 381 aa9.04□□□□□ -0.96
PSEN1-209ENST00000553855 SLC10A6Q3KNW5 377 aa9.04□□□□□ -0.96
PSEN1-209ENST00000553855 XKR4Q5GH76 650 aa9.04□□□□□ -0.96
PSEN1-209ENST00000553855 FAM171A1Q5VUB5 890 aa9.04□□□□□ -0.96
PSEN1-209ENST00000553855 CES5AQ6NT32 575 aa9.04□□□□□ -0.96
PSEN1-209ENST00000553855 LLGL2Q6P1M3 1020 aa9.04□□□□□ -0.96
PSEN1-209ENST00000553855 ADGRD2Q7Z7M1 963 aa9.04□□□□□ -0.96
PSEN1-209ENST00000553855 TMEM173Q86WV6 379 aaPredicted RBP9.04□□□□□ -0.96
PSEN1-209ENST00000553855 NELFCDQ8IXH7 590 aa9.04□□□□□ -0.96
PSEN1-209ENST00000553855 GPR65Q8IYL9 337 aa9.04□□□□□ -0.96
PSEN1-209ENST00000553855 GRAMD1CQ8IYS0 662 aa9.04□□□□□ -0.96
PSEN1-209ENST00000553855 HASPINQ8TF76 798 aa9.04□□□□□ -0.96
PSEN1-209ENST00000553855 RIN2Q8WYP3 895 aaPredicted RBP9.04□□□□□ -0.96
PSEN1-209ENST00000553855 CHAMP1Q96JM3 812 aa9.04□□□□□ -0.96
PSEN1-209ENST00000553855 PPP1R10Q96QC0 940 aaKnown RBP9.04□□□□□ -0.96
PSEN1-209ENST00000553855 HINFPQ9BQA5 517 aa9.04□□□□□ -0.96
PSEN1-209ENST00000553855 FAM213AQ9BRX8 229 aa9.04□□□□□ -0.96
PSEN1-209ENST00000553855 TTPALQ9BTX7 342 aa9.04□□□□□ -0.96
PSEN1-209ENST00000553855 GTPBP4Q9BZE4 634 aaKnown RBP9.04□□□□□ -0.96
PSEN1-209ENST00000553855 SLC39A2Q9NP94 309 aa9.04□□□□□ -0.96
PSEN1-209ENST00000553855 DZANK1Q9NVP4 752 aa9.04□□□□□ -0.96
PSEN1-209ENST00000553855 CD207Q9UJ71 328 aa9.04□□□□□ -0.96
PSEN1-209ENST00000553855 CPSF3Q9UKF6 684 aaKnown RBP9.04□□□□□ -0.96
PSEN1-209ENST00000553855 DERAQ9Y315 318 aa9.04□□□□□ -0.96
PSEN1-209ENST00000553855 IRAK3Q9Y616 596 aa9.04□□□□□ -0.96
PSEN1-209ENST00000553855 STYXL1Q9Y6J8 313 aa9.04□□□□□ -0.96
PSEN1-209ENST00000553855 NLRC5Q86WI3 1866 aa9.04□□□□□ -0.96
PSEN1-209ENST00000553855 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.03□□□□□ -0.96
PSEN1-209ENST00000553855 ZNF233A6NK53 670 aa9.03□□□□□ -0.96
PSEN1-209ENST00000553855 HIDE1A8MVS5 230 aa9.03□□□□□ -0.96
PSEN1-209ENST00000553855 LACTBL1A8MY62 500 aa9.03□□□□□ -0.96
PSEN1-209ENST00000553855 RNF223E7ERA6 249 aa9.03□□□□□ -0.96
PSEN1-209ENST00000553855 H3BQ06 376 aaPredicted RBP9.03□□□□□ -0.96
PSEN1-209ENST00000553855 H7C4K7 107 aa9.03□□□□□ -0.96
PSEN1-209ENST00000553855 TMEM189-UBE2V1I3L0A0 370 aa9.03□□□□□ -0.96
PSEN1-209ENST00000553855 EXTL3O43909 919 aa9.03□□□□□ -0.96
PSEN1-209ENST00000553855 KIF4AO95239 1232 aa9.03□□□□□ -0.96
PSEN1-209ENST00000553855 RPN1P04843 607 aaKnown RBP9.03□□□□□ -0.96
PSEN1-209ENST00000553855 HOXB8P17481 243 aaPredicted RBP9.03□□□□□ -0.96
PSEN1-209ENST00000553855 TNFSF9P41273 254 aa9.03□□□□□ -0.96
PSEN1-209ENST00000553855 ACOT2P49753 483 aa9.03□□□□□ -0.96
PSEN1-209ENST00000553855 DSG1Q02413 1049 aa9.03□□□□□ -0.96
PSEN1-209ENST00000553855 FAM160A1Q05DH4 1040 aa9.03□□□□□ -0.96
PSEN1-209ENST00000553855 PTPN14Q15678 1187 aa9.03□□□□□ -0.96
PSEN1-209ENST00000553855 LEXMQ3ZCV2 418 aa9.03□□□□□ -0.96
PSEN1-209ENST00000553855 ALKAL1Q6UXT8 129 aa9.03□□□□□ -0.96
PSEN1-209ENST00000553855 DSTYKQ6XUX3 929 aa9.03□□□□□ -0.96
PSEN1-209ENST00000553855 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.03□□□□□ -0.96
PSEN1-209ENST00000553855 NT5DC4Q86YG4 428 aa9.03□□□□□ -0.96
PSEN1-209ENST00000553855 GPD1LQ8N335 351 aa9.03□□□□□ -0.96
PSEN1-209ENST00000553855 APPL2Q8NEU8 664 aa9.03□□□□□ -0.96
PSEN1-209ENST00000553855 ZNF507Q8TCN5 953 aa9.03□□□□□ -0.96
PSEN1-209ENST00000553855 BCL7CQ8WUZ0 217 aaPredicted RBP9.03□□□□□ -0.96
PSEN1-209ENST00000553855 AUTS2Q8WXX7 1259 aa9.03□□□□□ -0.96
PSEN1-209ENST00000553855 RABGGTAQ92696 567 aa9.03□□□□□ -0.96
PSEN1-209ENST00000553855 KCTD15Q96SI1 283 aaPredicted RBP9.03□□□□□ -0.96
PSEN1-209ENST00000553855 STRA6Q9BX79 667 aa9.03□□□□□ -0.96
PSEN1-209ENST00000553855 PCIF1Q9H4Z3 704 aa9.03□□□□□ -0.96
PSEN1-209ENST00000553855 GOLGA2P5Q9HBQ8 144 aa9.03□□□□□ -0.96
PSEN1-209ENST00000553855 MARCH5Q9NX47 278 aa9.03□□□□□ -0.96
PSEN1-209ENST00000553855 RBAKQ9NYW8 714 aaPredicted RBP9.03□□□□□ -0.96
PSEN1-209ENST00000553855 PCDHGC5Q9Y5F6 944 aa9.03□□□□□ -0.96
PSEN1-209ENST00000553855 VCANP13611 3396 aa9.03□□□□□ -0.96
PSEN1-209ENST00000553855 MYO9BQ13459 2157 aa9.02□□□□□ -0.97
PSEN1-209ENST00000553855 TTC26A0AVF1 554 aa9.02□□□□□ -0.97
PSEN1-209ENST00000553855 GOLGA6L22H0YM25 854 aa9.02□□□□□ -0.97
PSEN1-209ENST00000553855 CALUO43852 315 aaPredicted RBP9.02□□□□□ -0.97
PSEN1-209ENST00000553855 B4GALT3O60512 393 aa9.02□□□□□ -0.97
PSEN1-209ENST00000553855 EXOC3O60645 756 aa9.02□□□□□ -0.97
PSEN1-209ENST00000553855 CLASP2O75122 1294 aaKnown RBP9.02□□□□□ -0.97
PSEN1-209ENST00000553855 CLSTN1O94985 981 aa9.02□□□□□ -0.97
PSEN1-209ENST00000553855 GLUD1P00367 558 aa9.02□□□□□ -0.97
PSEN1-209ENST00000553855 ABL1P00519 1130 aa9.02□□□□□ -0.97
PSEN1-209ENST00000553855 TNNC2P02585 160 aa9.02□□□□□ -0.97
PSEN1-209ENST00000553855 TMEM191BP0C7N4 346 aa9.02□□□□□ -0.97
PSEN1-209ENST00000553855 CASP1P29466 404 aa9.02□□□□□ -0.97
PSEN1-209ENST00000553855 GTF2F1P35269 517 aaKnown RBP eCLIP9.02□□□□□ -0.97
PSEN1-209ENST00000553855 CASP5P51878 434 aa9.02□□□□□ -0.97
PSEN1-209ENST00000553855 TFF2Q03403 129 aa9.02□□□□□ -0.97
PSEN1-209ENST00000553855 SPAG1Q07617 926 aa9.02□□□□□ -0.97
PSEN1-209ENST00000553855 STIM1Q13586 685 aa9.02□□□□□ -0.97
PSEN1-209ENST00000553855 CLUL1Q15846 466 aa9.02□□□□□ -0.97
PSEN1-209ENST00000553855 ENOX2Q16206 610 aaKnown RBP9.02□□□□□ -0.97
PSEN1-209ENST00000553855 PSMD5Q16401 504 aa9.02□□□□□ -0.97
PSEN1-209ENST00000553855 UPP1Q16831 310 aa9.02□□□□□ -0.97
PSEN1-209ENST00000553855 KNOP1Q1ED39 458 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms