RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 VWA8A3KMH1 1905 aa17.37■□□□□ 0.37
ACTN1-209ENST00000553659 FANCMQ8IYD8 2048 aa17.37■□□□□ 0.37
ACTN1-209ENST00000553659 LRRIQ4A6NIV6 560 aa17.37■□□□□ 0.37
ACTN1-209ENST00000553659 ANHXE9PGG2 379 aa17.37■□□□□ 0.37
ACTN1-209ENST00000553659 USO1O60763 962 aaKnown RBP17.37■□□□□ 0.37
ACTN1-209ENST00000553659 ZMYND10O75800 440 aa17.37■□□□□ 0.37
ACTN1-209ENST00000553659 RPL17P18621 184 aaKnown RBP17.37■□□□□ 0.37
ACTN1-209ENST00000553659 COPB1P53618 953 aaKnown RBP17.37■□□□□ 0.37
ACTN1-209ENST00000553659 EHHADHQ08426 723 aa17.37■□□□□ 0.37
ACTN1-209ENST00000553659 TUSC3Q13454 348 aa17.37■□□□□ 0.37
ACTN1-209ENST00000553659 HSP90AA2PQ14568 343 aaPredicted RBP17.37■□□□□ 0.37
ACTN1-209ENST00000553659 KRT31Q15323 416 aa17.37■□□□□ 0.37
ACTN1-209ENST00000553659 CENPPQ6IPU0 288 aa17.37■□□□□ 0.37
ACTN1-209ENST00000553659 TTI2Q6NXR4 508 aa17.37■□□□□ 0.37
ACTN1-209ENST00000553659 POTEGQ6S5H5 508 aa17.37■□□□□ 0.37
ACTN1-209ENST00000553659 FZD8Q9H461 694 aa17.37■□□□□ 0.37
ACTN1-209ENST00000553659 PRMT7Q9NVM4 692 aaPredicted RBP17.37■□□□□ 0.37
ACTN1-209ENST00000553659 INTS13Q9NVM9 706 aa17.37■□□□□ 0.37
ACTN1-209ENST00000553659 ZFP37Q9Y6Q3 630 aaPredicted RBP17.37■□□□□ 0.37
ACTN1-209ENST00000553659 SF3B1O75533 1304 aaKnown RBP eCLIP17.37■□□□□ 0.379e-6■■■■■ 87.9
ACTN1-209ENST00000553659 N4BP3O15049 544 aa17.36■□□□□ 0.37
ACTN1-209ENST00000553659 SPATA31C1P0DKV0 1188 aa17.36■□□□□ 0.37
ACTN1-209ENST00000553659 RFX1P22670 979 aa17.36■□□□□ 0.37
ACTN1-209ENST00000553659 PBX1P40424 430 aa17.36■□□□□ 0.37
ACTN1-209ENST00000553659 STK4Q13043 487 aa17.36■□□□□ 0.37
ACTN1-209ENST00000553659 FAM187BQ17R55 369 aa17.36■□□□□ 0.37
ACTN1-209ENST00000553659 RTP2Q5QGT7 225 aa17.36■□□□□ 0.37
ACTN1-209ENST00000553659 PHLDB3Q6NSJ2 640 aa17.36■□□□□ 0.37
ACTN1-209ENST00000553659 PRSS55Q6UWB4 352 aaPredicted RBP17.36■□□□□ 0.37
ACTN1-209ENST00000553659 GET4Q7L5D6 327 aaPredicted RBP17.36■□□□□ 0.37
ACTN1-209ENST00000553659 MAEAQ7L5Y9 396 aa17.36■□□□□ 0.37
ACTN1-209ENST00000553659 CNGA4Q8IV77 575 aa17.36■□□□□ 0.37
ACTN1-209ENST00000553659 CSGALNACT2Q8N6G5 542 aa17.36■□□□□ 0.37
ACTN1-209ENST00000553659 SYT2Q8N9I0 419 aaPredicted RBP17.36■□□□□ 0.37
ACTN1-209ENST00000553659 MCPH1Q8NEM0 835 aa17.36■□□□□ 0.37
ACTN1-209ENST00000553659 GPR152Q8TDT2 470 aa17.36■□□□□ 0.37
ACTN1-209ENST00000553659 PAAF1Q9BRP4 392 aa17.36■□□□□ 0.37
ACTN1-209ENST00000553659 SEMA4AQ9H3S1 761 aa17.36■□□□□ 0.37
ACTN1-209ENST00000553659 TBC1D17Q9HA65 648 aa17.36■□□□□ 0.37
ACTN1-209ENST00000553659 GPRC5CQ9NQ84 441 aa17.36■□□□□ 0.37
ACTN1-209ENST00000553659 SLC2A4RGQ9NR83 387 aa17.36■□□□□ 0.37
ACTN1-209ENST00000553659 CACNG4Q9UBN1 327 aa17.36■□□□□ 0.37
ACTN1-209ENST00000553659 MIA3Q5JRA6 1907 aa17.36■□□□□ 0.37
ACTN1-209ENST00000553659 MYO15AQ9UKN7 3530 aa17.35■□□□□ 0.37
ACTN1-209ENST00000553659 A0A1W2PQC6 194 aa17.35■□□□□ 0.37
ACTN1-209ENST00000553659 FRMD3A2A2Y4 597 aa17.35■□□□□ 0.37
ACTN1-209ENST00000553659 AKR1B15C9JRZ8 316 aaPredicted RBP17.35■□□□□ 0.37
ACTN1-209ENST00000553659 ARHGAP6O43182 974 aa17.35■□□□□ 0.37
ACTN1-209ENST00000553659 STX10O60499 249 aa17.35■□□□□ 0.37
ACTN1-209ENST00000553659 MED24O75448 989 aa17.35■□□□□ 0.37
ACTN1-209ENST00000553659 KRT18P05783 430 aaKnown RBP17.35■□□□□ 0.37
ACTN1-209ENST00000553659 IDEP14735 1019 aa17.35■□□□□ 0.37
ACTN1-209ENST00000553659 HTR4Q13639 388 aa17.35■□□□□ 0.37
ACTN1-209ENST00000553659 CDCA2Q69YH5 1023 aaPredicted RBP17.35■□□□□ 0.37
ACTN1-209ENST00000553659 GPBP1Q86WP2 473 aa17.35■□□□□ 0.37
ACTN1-209ENST00000553659 CATSPER3Q86XQ3 398 aa17.35■□□□□ 0.37
ACTN1-209ENST00000553659 ZBTB8OSQ8IWT0 167 aa17.35■□□□□ 0.37
ACTN1-209ENST00000553659 DNAJC19Q96DA6 116 aa17.35■□□□□ 0.37
ACTN1-209ENST00000553659 PANX2Q96RD6 677 aa17.35■□□□□ 0.37
ACTN1-209ENST00000553659 CLSTN3Q9BQT9 956 aa17.35■□□□□ 0.37
ACTN1-209ENST00000553659 TTPALQ9BTX7 342 aa17.35■□□□□ 0.37
ACTN1-209ENST00000553659 PANK4Q9NVE7 773 aa17.35■□□□□ 0.37
ACTN1-209ENST00000553659 KCND2Q9NZV8 630 aa17.35■□□□□ 0.37
ACTN1-209ENST00000553659 FBXW11Q9UKB1 542 aa17.35■□□□□ 0.37
ACTN1-209ENST00000553659 SPTBN4Q9H254 2564 aa17.35■□□□□ 0.37
ACTN1-209ENST00000553659 GOLGA6L9A6NEM1 432 aa17.34■□□□□ 0.37
ACTN1-209ENST00000553659 THP07101 528 aa17.34■□□□□ 0.37
ACTN1-209ENST00000553659 HNRNPA1P09651 372 aaKnown RBP eCLIP17.34■□□□□ 0.37
ACTN1-209ENST00000553659 CYP11B2P19099 503 aa17.34■□□□□ 0.37
ACTN1-209ENST00000553659 FSHRP23945 695 aa17.34■□□□□ 0.37
ACTN1-209ENST00000553659 SLC12A3P55017 1021 aa17.34■□□□□ 0.37
ACTN1-209ENST00000553659 ECM1Q16610 540 aa17.34■□□□□ 0.37
ACTN1-209ENST00000553659 FAM26FQ5R3K3 315 aa17.34■□□□□ 0.37
ACTN1-209ENST00000553659 FAM171A1Q5VUB5 890 aa17.34■□□□□ 0.37
ACTN1-209ENST00000553659 DYMQ7RTS9 669 aa17.34■□□□□ 0.37
ACTN1-209ENST00000553659 KCNK18Q7Z418 384 aa17.34■□□□□ 0.37
ACTN1-209ENST00000553659 CEP57Q86XR8 500 aa17.34■□□□□ 0.37
ACTN1-209ENST00000553659 KIAA0895Q8NCT3 520 aa17.34■□□□□ 0.37
ACTN1-209ENST00000553659 LNX1Q8TBB1 728 aaPredicted RBP17.34■□□□□ 0.37
ACTN1-209ENST00000553659 PIK3R5Q8WYR1 880 aa17.34■□□□□ 0.37
ACTN1-209ENST00000553659 NACC1Q96RE7 527 aa17.34■□□□□ 0.37
ACTN1-209ENST00000553659 NOTCH4Q99466 2003 aa17.34■□□□□ 0.37
ACTN1-209ENST00000553659 SRRTQ9BXP5 876 aaKnown RBP17.34■□□□□ 0.37
ACTN1-209ENST00000553659 C2orf40Q9H1Z8 148 aa17.34■□□□□ 0.37
ACTN1-209ENST00000553659 SIT1Q9Y3P8 196 aa17.34■□□□□ 0.37
ACTN1-209ENST00000553659 NUMBLQ9Y6R0 609 aa17.34■□□□□ 0.37
ACTN1-209ENST00000553659 CACNA1IQ9P0X4 2223 aa17.33■□□□□ 0.37
ACTN1-209ENST00000553659 CASTOR2A6NHX0 329 aa17.33■□□□□ 0.36
ACTN1-209ENST00000553659 TTLL13PA6NNM8 815 aa17.33■□□□□ 0.36
ACTN1-209ENST00000553659 LGALS16A8MUM7 142 aa17.33■□□□□ 0.36
ACTN1-209ENST00000553659 E9PMD0 336 aa17.33■□□□□ 0.36
ACTN1-209ENST00000553659 PTGESO14684 152 aa17.33■□□□□ 0.36
ACTN1-209ENST00000553659 KIF4AO95239 1232 aa17.33■□□□□ 0.36
ACTN1-209ENST00000553659 PRKCSHP14314 528 aaPredicted RBP17.33■□□□□ 0.36
ACTN1-209ENST00000553659 ELAVL2Q12926 359 aaKnown RBP17.33■□□□□ 0.36
ACTN1-209ENST00000553659 PRPF4BQ13523 1007 aaKnown RBP17.33■□□□□ 0.36
ACTN1-209ENST00000553659 ARID5BQ14865 1188 aa17.33■□□□□ 0.36
ACTN1-209ENST00000553659 PSMD5Q16401 504 aa17.33■□□□□ 0.36
ACTN1-209ENST00000553659 MAPK6Q16659 721 aa17.33■□□□□ 0.36
ACTN1-209ENST00000553659 HSP90AA4PQ58FG1 418 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms