RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 ATP6V0A4Q9HBG4 840 aa6.31□□□□□ -1.4
SMARCE1P3-201ENST00000553649 SLC9A2Q9UBY0 812 aa6.31□□□□□ -1.4
SMARCE1P3-201ENST00000553649 ZC3H7BQ9UGR2 993 aaKnown RBP6.31□□□□□ -1.4
SMARCE1P3-201ENST00000553649 PUF60Q9UHX1 559 aaKnown RBP6.31□□□□□ -1.4
SMARCE1P3-201ENST00000553649 RAB23Q9ULC3 237 aa6.31□□□□□ -1.4
SMARCE1P3-201ENST00000553649 ST3GAL5Q9UNP4 418 aa6.31□□□□□ -1.4
SMARCE1P3-201ENST00000553649 NOC2LQ9Y3T9 749 aaKnown RBP6.31□□□□□ -1.4
SMARCE1P3-201ENST00000553649 PCDHA2Q9Y5H9 948 aa6.31□□□□□ -1.4
SMARCE1P3-201ENST00000553649 RAI2Q9Y5P3 530 aa6.31□□□□□ -1.4
SMARCE1P3-201ENST00000553649 TEP1Q99973 2627 aaKnown RBP6.31□□□□□ -1.4
SMARCE1P3-201ENST00000553649 LAMA4Q16363 1823 aa6.31□□□□□ -1.4
SMARCE1P3-201ENST00000553649 CFAP46Q8IYW2 2715 aa6.3□□□□□ -1.4
SMARCE1P3-201ENST00000553649 ZNF462Q96JM2 2506 aa6.3□□□□□ -1.4
SMARCE1P3-201ENST00000553649 LOC100289279A0A1B0GTE1 492 aa6.3□□□□□ -1.4
SMARCE1P3-201ENST00000553649 DBX1A6NMT0 343 aa6.3□□□□□ -1.4
SMARCE1P3-201ENST00000553649 E7EWF7 191 aa6.3□□□□□ -1.4
SMARCE1P3-201ENST00000553649 RPLP2P05387 115 aaKnown RBP6.3□□□□□ -1.4
SMARCE1P3-201ENST00000553649 CYP21A2P08686 494 aa6.3□□□□□ -1.4
SMARCE1P3-201ENST00000553649 KLRC1P26715 233 aa6.3□□□□□ -1.4
SMARCE1P3-201ENST00000553649 KIF5BP33176 963 aa6.3□□□□□ -1.4
SMARCE1P3-201ENST00000553649 NOVA1P51513 510 aaKnown RBP6.3□□□□□ -1.4
SMARCE1P3-201ENST00000553649 STAT5BP51692 787 aa6.3□□□□□ -1.4
SMARCE1P3-201ENST00000553649 ANTXR2P58335 489 aa6.3□□□□□ -1.4
SMARCE1P3-201ENST00000553649 ACTR2P61160 394 aa6.3□□□□□ -1.4
SMARCE1P3-201ENST00000553649 NUCB1Q02818 461 aa6.3□□□□□ -1.4
SMARCE1P3-201ENST00000553649 PTH1RQ03431 593 aa6.3□□□□□ -1.4
SMARCE1P3-201ENST00000553649 SF3A2Q15428 464 aaKnown RBP6.3□□□□□ -1.4
SMARCE1P3-201ENST00000553649 KIZQ2M2Z5 673 aa6.3□□□□□ -1.4
SMARCE1P3-201ENST00000553649 MTHFD1LQ6UB35 978 aa6.3□□□□□ -1.4
SMARCE1P3-201ENST00000553649 SLC24A5Q71RS6 500 aa6.3□□□□□ -1.4
SMARCE1P3-201ENST00000553649 TMC7Q7Z402 723 aa6.3□□□□□ -1.4
SMARCE1P3-201ENST00000553649 CKAP2LQ8IYA6 745 aa6.3□□□□□ -1.4
SMARCE1P3-201ENST00000553649 ZNF654Q8IZM8 581 aa6.3□□□□□ -1.4
SMARCE1P3-201ENST00000553649 METTL13Q8N6R0 699 aa6.3□□□□□ -1.4
SMARCE1P3-201ENST00000553649 MRPL43Q8N983 215 aaKnown RBP6.3□□□□□ -1.4
SMARCE1P3-201ENST00000553649 TMEM87AQ8NBN3 555 aa6.3□□□□□ -1.4
SMARCE1P3-201ENST00000553649 C2CD4AQ8NCU7 369 aaPredicted RBP6.3□□□□□ -1.4
SMARCE1P3-201ENST00000553649 NCOA7Q8NI08 942 aa6.3□□□□□ -1.4
SMARCE1P3-201ENST00000553649 TMEM40Q8WWA1 233 aa6.3□□□□□ -1.4
SMARCE1P3-201ENST00000553649 TNPO1Q92973 898 aaKnown RBP6.3□□□□□ -1.4
SMARCE1P3-201ENST00000553649 CCDC136Q96JN2 1154 aa6.3□□□□□ -1.4
SMARCE1P3-201ENST00000553649 ZNF668Q96K58 619 aaPredicted RBP6.3□□□□□ -1.4
SMARCE1P3-201ENST00000553649 OSMRQ99650 979 aa6.3□□□□□ -1.4
SMARCE1P3-201ENST00000553649 SPZ1Q9BXG8 430 aa6.3□□□□□ -1.4
SMARCE1P3-201ENST00000553649 FAM126AQ9BYI3 521 aaPredicted RBP6.3□□□□□ -1.4
SMARCE1P3-201ENST00000553649 RHOBTB2Q9BYZ6 727 aa6.3□□□□□ -1.4
SMARCE1P3-201ENST00000553649 CWH43Q9H720 699 aa6.3□□□□□ -1.4
SMARCE1P3-201ENST00000553649 JADE2Q9NQC1 790 aa6.3□□□□□ -1.4
SMARCE1P3-201ENST00000553649 SLC2A4RGQ9NR83 387 aa6.3□□□□□ -1.4
SMARCE1P3-201ENST00000553649 KCNH7Q9NS40 1196 aa6.3□□□□□ -1.4
SMARCE1P3-201ENST00000553649 DZANK1Q9NVP4 752 aa6.3□□□□□ -1.4
SMARCE1P3-201ENST00000553649 PCDHA6Q9UN73 950 aa6.3□□□□□ -1.4
SMARCE1P3-201ENST00000553649 PCDHA8Q9Y5H6 950 aa6.3□□□□□ -1.4
SMARCE1P3-201ENST00000553649 UBIAD1Q9Y5Z9 338 aa6.3□□□□□ -1.4
SMARCE1P3-201ENST00000553649 IRAK3Q9Y616 596 aa6.3□□□□□ -1.4
SMARCE1P3-201ENST00000553649 SMIM35A0A1B0GVV1 85 aa6.29□□□□□ -1.4
SMARCE1P3-201ENST00000553649 KANSL1LA0AUZ9 987 aa6.29□□□□□ -1.4
SMARCE1P3-201ENST00000553649 C2orf71A6NGG8 1288 aa6.29□□□□□ -1.4
SMARCE1P3-201ENST00000553649 CCDC69A6NI79 296 aa6.29□□□□□ -1.4
SMARCE1P3-201ENST00000553649 GPR182O15218 404 aa6.29□□□□□ -1.4
SMARCE1P3-201ENST00000553649 DDAH1O94760 285 aa6.29□□□□□ -1.4
SMARCE1P3-201ENST00000553649 IGHDP01880 384 aa6.29□□□□□ -1.4
SMARCE1P3-201ENST00000553649 VTNP04004 478 aa6.29□□□□□ -1.4
SMARCE1P3-201ENST00000553649 LAG3P18627 525 aa6.29□□□□□ -1.4
SMARCE1P3-201ENST00000553649 ZNF76P36508 570 aa6.29□□□□□ -1.4
SMARCE1P3-201ENST00000553649 KRT17Q04695 432 aa6.29□□□□□ -1.4
SMARCE1P3-201ENST00000553649 ITGB3BPQ13352 177 aaPredicted RBP6.29□□□□□ -1.4
SMARCE1P3-201ENST00000553649 AASDHQ4L235 1098 aaPredicted RBP6.29□□□□□ -1.4
SMARCE1P3-201ENST00000553649 PAOXQ6QHF9 649 aa6.29□□□□□ -1.4
SMARCE1P3-201ENST00000553649 CASC1Q6TDU7 716 aa6.29□□□□□ -1.4
SMARCE1P3-201ENST00000553649 TMC5Q6UXY8 1006 aa6.29□□□□□ -1.4
SMARCE1P3-201ENST00000553649 PLPPR4Q7Z2D5 763 aa6.29□□□□□ -1.4
SMARCE1P3-201ENST00000553649 GPR149Q86SP6 731 aa6.29□□□□□ -1.4
SMARCE1P3-201ENST00000553649 SMC5Q8IY18 1101 aa6.29□□□□□ -1.4
SMARCE1P3-201ENST00000553649 KIAA0319LQ8IZA0 1049 aa6.29□□□□□ -1.4
SMARCE1P3-201ENST00000553649 NME8Q8N427 588 aa6.29□□□□□ -1.4
SMARCE1P3-201ENST00000553649 SRBD1Q8N5C6 995 aaKnown RBP6.29□□□□□ -1.4
SMARCE1P3-201ENST00000553649 IGDCC4Q8TDY8 1250 aa6.29□□□□□ -1.4
SMARCE1P3-201ENST00000553649 NXPE3Q969Y0 559 aa6.29□□□□□ -1.4
SMARCE1P3-201ENST00000553649 LZTS2Q9BRK4 669 aa6.29□□□□□ -1.4
SMARCE1P3-201ENST00000553649 OSBPL6Q9BZF3 934 aa6.29□□□□□ -1.4
SMARCE1P3-201ENST00000553649 LY9Q9HBG7 655 aa6.29□□□□□ -1.4
SMARCE1P3-201ENST00000553649 RGS18Q9NS28 235 aa6.29□□□□□ -1.4
SMARCE1P3-201ENST00000553649 C1orf112Q9NSG2 853 aa6.29□□□□□ -1.4
SMARCE1P3-201ENST00000553649 EPS15L1Q9UBC2 864 aa6.29□□□□□ -1.4
SMARCE1P3-201ENST00000553649 FNDC3AQ9Y2H6 1198 aaKnown RBP6.29□□□□□ -1.4
SMARCE1P3-201ENST00000553649 KALRNO60229 2985 aa6.29□□□□□ -1.4
SMARCE1P3-201ENST00000553649 ADAMTS20P59510 1910 aa6.29□□□□□ -1.4
SMARCE1P3-201ENST00000553649 KDM3AQ9Y4C1 1321 aa6.28□□□□□ -1.4
SMARCE1P3-201ENST00000553649 C9IYK1 514 aa6.28□□□□□ -1.4
SMARCE1P3-201ENST00000553649 NT5C1B-RDH14C9J2C7 533 aa6.28□□□□□ -1.4
SMARCE1P3-201ENST00000553649 PDE2AO00408 941 aaPredicted RBP6.28□□□□□ -1.4
SMARCE1P3-201ENST00000553649 PRC1O43663 620 aa6.28□□□□□ -1.4
SMARCE1P3-201ENST00000553649 CCNE2O96020 404 aa6.28□□□□□ -1.4
SMARCE1P3-201ENST00000553649 EPCAMP16422 314 aa6.28□□□□□ -1.4
SMARCE1P3-201ENST00000553649 PPM1AP35813 382 aa6.28□□□□□ -1.4
SMARCE1P3-201ENST00000553649 MAGEA9P43362 315 aa6.28□□□□□ -1.4
SMARCE1P3-201ENST00000553649 GNAQP50148 359 aa6.28□□□□□ -1.4
SMARCE1P3-201ENST00000553649 METAP2P50579 478 aaKnown RBP eCLIP6.28□□□□□ -1.4
SMARCE1P3-201ENST00000553649 NAPAP54920 295 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms