RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 ATP2C1P98194 919 aaPredicted RBP4.61□□□□□ -1.67
TDP1-207ENST00000553617 RAB32Q13637 225 aa4.61□□□□□ -1.67
TDP1-207ENST00000553617 NFYCQ13952 458 aa4.61□□□□□ -1.67
TDP1-207ENST00000553617 SIM2Q14190 667 aaPredicted RBP4.61□□□□□ -1.67
TDP1-207ENST00000553617 ATP2B3Q16720 1220 aa4.61□□□□□ -1.67
TDP1-207ENST00000553617 VWA3BQ502W6 1294 aa4.61□□□□□ -1.67
TDP1-207ENST00000553617 CYP26C1Q6V0L0 522 aa4.61□□□□□ -1.67
TDP1-207ENST00000553617 USP30Q70CQ3 517 aa4.61□□□□□ -1.67
TDP1-207ENST00000553617 PCGF5Q86SE9 256 aa4.61□□□□□ -1.67
TDP1-207ENST00000553617 ADGRE4PQ86SQ3 457 aa4.61□□□□□ -1.67
TDP1-207ENST00000553617 PDSS2Q86YH6 399 aa4.61□□□□□ -1.67
TDP1-207ENST00000553617 CMTM4Q8IZR5 234 aa4.61□□□□□ -1.67
TDP1-207ENST00000553617 VGLL2Q8N8G2 317 aa4.61□□□□□ -1.67
TDP1-207ENST00000553617 ANKRD53Q8N9V6 530 aa4.61□□□□□ -1.67
TDP1-207ENST00000553617 OR56A3Q8NH54 315 aa4.61□□□□□ -1.67
TDP1-207ENST00000553617 ZNF384Q8TF68 577 aa4.61□□□□□ -1.67
TDP1-207ENST00000553617 DIRC2Q96SL1 478 aa4.61□□□□□ -1.67
TDP1-207ENST00000553617 GPHA2Q96T91 129 aa4.61□□□□□ -1.67
TDP1-207ENST00000553617 HEPHQ9BQS7 1158 aa4.61□□□□□ -1.67
TDP1-207ENST00000553617 CHST8Q9H2A9 424 aa4.61□□□□□ -1.67
TDP1-207ENST00000553617 AS3MTQ9HBK9 375 aa4.61□□□□□ -1.67
TDP1-207ENST00000553617 OBP2BQ9NPH6 170 aa4.61□□□□□ -1.67
TDP1-207ENST00000553617 FAM30AQ9NZY2 134 aa4.61□□□□□ -1.67
TDP1-207ENST00000553617 JKAMPQ9P055 326 aa4.61□□□□□ -1.67
TDP1-207ENST00000553617 CFAP97Q9P2B7 532 aa4.61□□□□□ -1.67
TDP1-207ENST00000553617 FAM184BQ9ULE4 1060 aa4.61□□□□□ -1.67
TDP1-207ENST00000553617 LRRFIP2Q9Y608 721 aaKnown RBP4.61□□□□□ -1.67
TDP1-207ENST00000553617 A0A087WZ62 844 aa4.6□□□□□ -1.67
TDP1-207ENST00000553617 A0A1B0GVC2 190 aa4.6□□□□□ -1.67
TDP1-207ENST00000553617 LGALS16A8MUM7 142 aa4.6□□□□□ -1.67
TDP1-207ENST00000553617 TMEM233B4DJY2 109 aa4.6□□□□□ -1.67
TDP1-207ENST00000553617 PRRT4C9JH25 899 aa4.6□□□□□ -1.67
TDP1-207ENST00000553617 PYCARD-AS1I3L0S3 204 aa4.6□□□□□ -1.67
TDP1-207ENST00000553617 ACKR2O00590 384 aa4.6□□□□□ -1.67
TDP1-207ENST00000553617 NCAM2O15394 837 aa4.6□□□□□ -1.67
TDP1-207ENST00000553617 PJA2O43164 708 aa4.6□□□□□ -1.67
TDP1-207ENST00000553617 GJB1P08034 283 aa4.6□□□□□ -1.67
TDP1-207ENST00000553617 DHRS4L1P0CG22 281 aa4.6□□□□□ -1.67
TDP1-207ENST00000553617 RAP2AP10114 183 aa4.6□□□□□ -1.67
TDP1-207ENST00000553617 TXNP10599 105 aaKnown RBP4.6□□□□□ -1.67
TDP1-207ENST00000553617 MYL4P12829 197 aa4.6□□□□□ -1.67
TDP1-207ENST00000553617 GABRB3P28472 473 aa4.6□□□□□ -1.67
TDP1-207ENST00000553617 PHKA1P46020 1223 aa4.6□□□□□ -1.67
TDP1-207ENST00000553617 KCNJ5P48544 419 aa4.6□□□□□ -1.67
TDP1-207ENST00000553617 SLC11A2P49281 568 aa4.6□□□□□ -1.67
TDP1-207ENST00000553617 CARSP49589 748 aaKnown RBP4.6□□□□□ -1.67
TDP1-207ENST00000553617 NOMO3P69849 1222 aa4.6□□□□□ -1.67
TDP1-207ENST00000553617 CAP1Q01518 475 aa4.6□□□□□ -1.67
TDP1-207ENST00000553617 APBA1Q02410 837 aa4.6□□□□□ -1.67
TDP1-207ENST00000553617 CREMQ03060 361 aa4.6□□□□□ -1.67
TDP1-207ENST00000553617 PTH1RQ03431 593 aa4.6□□□□□ -1.67
TDP1-207ENST00000553617 DUSP8Q13202 625 aa4.6□□□□□ -1.67
TDP1-207ENST00000553617 MRPL49Q13405 166 aaKnown RBP4.6□□□□□ -1.67
TDP1-207ENST00000553617 ACAP1Q15027 740 aa4.6□□□□□ -1.67
TDP1-207ENST00000553617 POSTNQ15063 836 aa4.6□□□□□ -1.67
TDP1-207ENST00000553617 SLC44A4Q53GD3 710 aa4.6□□□□□ -1.67
TDP1-207ENST00000553617 ZMAT1Q5H9K5 638 aa4.6□□□□□ -1.67
TDP1-207ENST00000553617 FKBP15Q5T1M5 1219 aa4.6□□□□□ -1.67
TDP1-207ENST00000553617 LCE1DQ5T752 114 aa4.6□□□□□ -1.67
TDP1-207ENST00000553617 SPTY2D1Q68D10 685 aaPredicted RBP4.6□□□□□ -1.67
TDP1-207ENST00000553617 LMBRD2Q68DH5 695 aaPredicted RBP4.6□□□□□ -1.67
TDP1-207ENST00000553617 UNC13DQ70J99 1090 aa4.6□□□□□ -1.67
TDP1-207ENST00000553617 ZNF365Q70YC5 407 aa4.6□□□□□ -1.67
TDP1-207ENST00000553617 ANKRD18AQ8IVF6 992 aa4.6□□□□□ -1.67
TDP1-207ENST00000553617 KLHL36Q8N4N3 616 aa4.6□□□□□ -1.67
TDP1-207ENST00000553617 ATG16L2Q8NAA4 619 aa4.6□□□□□ -1.67
TDP1-207ENST00000553617 CFHR4Q92496 578 aa4.6□□□□□ -1.67
TDP1-207ENST00000553617 MBD6Q96DN6 1003 aa4.6□□□□□ -1.67
TDP1-207ENST00000553617 NELL2Q99435 816 aa4.6□□□□□ -1.67
TDP1-207ENST00000553617 MRI1Q9BV20 369 aa4.6□□□□□ -1.67
TDP1-207ENST00000553617 PACSIN1Q9BY11 444 aa4.6□□□□□ -1.67
TDP1-207ENST00000553617 BRD9Q9H8M2 597 aa4.6□□□□□ -1.67
TDP1-207ENST00000553617 SLAMF7Q9NQ25 335 aa4.6□□□□□ -1.67
TDP1-207ENST00000553617 A1CFQ9NQ94 594 aaKnown RBP4.6□□□□□ -1.67
TDP1-207ENST00000553617 DACT1Q9NYF0 836 aa4.6□□□□□ -1.67
TDP1-207ENST00000553617 PDP2Q9P2J9 529 aa4.6□□□□□ -1.67
TDP1-207ENST00000553617 TCRBV7S2A1N4TA0A589 114 aa4.59□□□□□ -1.67
TDP1-207ENST00000553617 FAM234BA2RU67 622 aa4.59□□□□□ -1.67
TDP1-207ENST00000553617 PMS2P1A4D2B8 440 aa4.59□□□□□ -1.67
TDP1-207ENST00000553617 SH3D21A4FU49 640 aa4.59□□□□□ -1.67
TDP1-207ENST00000553617 KCNQ3O43525 872 aa4.59□□□□□ -1.67
TDP1-207ENST00000553617 SASH1O94885 1247 aa4.59□□□□□ -1.67
TDP1-207ENST00000553617 UNC5CO95185 931 aa4.59□□□□□ -1.67
TDP1-207ENST00000553617 CNOT4O95628 575 aaKnown RBP4.59□□□□□ -1.67
TDP1-207ENST00000553617 AGR2O95994 175 aa4.59□□□□□ -1.67
TDP1-207ENST00000553617 CENPBP07199 599 aaPredicted RBP4.59□□□□□ -1.67
TDP1-207ENST00000553617 JUNBP17275 347 aaPredicted RBP4.59□□□□□ -1.67
TDP1-207ENST00000553617 ATP5JP18859 108 aa4.59□□□□□ -1.67
TDP1-207ENST00000553617 MAPK9P45984 424 aa4.59□□□□□ -1.67
TDP1-207ENST00000553617 ITGA8P53708 1063 aa4.59□□□□□ -1.67
TDP1-207ENST00000553617 ARL4CP56559 192 aa4.59□□□□□ -1.67
TDP1-207ENST00000553617 DLG4P78352 724 aa4.59□□□□□ -1.67
TDP1-207ENST00000553617 POU6F2P78424 691 aaPredicted RBP4.59□□□□□ -1.67
TDP1-207ENST00000553617 FSTL1Q12841 308 aa4.59□□□□□ -1.67
TDP1-207ENST00000553617 TCF15Q12870 199 aa4.59□□□□□ -1.67
TDP1-207ENST00000553617 PTK2BQ14289 1009 aa4.59□□□□□ -1.67
TDP1-207ENST00000553617 SPARCL1Q14515 664 aa4.59□□□□□ -1.67
TDP1-207ENST00000553617 DCAF12L1Q5VU92 463 aa4.59□□□□□ -1.67
TDP1-207ENST00000553617 JAKMIP3Q5VZ66 844 aa4.59□□□□□ -1.67
TDP1-207ENST00000553617 KRT40Q6A162 431 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms