RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 ABL1P00519 1130 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 IDO1P14902 403 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 G0S2P27469 103 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 RPA1P27694 616 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 KLK7P49862 253 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 RHAGQ02094 409 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 ZNF268Q14587 947 aaPredicted RBP9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 COL19A1Q14993 1142 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 PCNX4Q63HM2 1172 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 ZNF589Q86UQ0 364 aaPredicted RBP9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 LRRC6Q86X45 466 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 BBS7Q8IWZ6 715 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 BRSK1Q8TDC3 778 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 BCL7CQ8WUZ0 217 aaPredicted RBP9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 CYGBQ8WWM9 190 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 FAM105AQ9NUU6 356 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 CD274Q9NZQ7 290 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 REV1Q9UBZ9 1251 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 POLHQ9Y253 713 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 IFNA14P01570 189 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 ZNF76P36508 570 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 HADHAP40939 763 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 ABCG1P45844 678 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 NIPAL4Q0D2K0 466 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 PKN1Q16512 942 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 HAUS3Q68CZ6 603 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 ALDH8A1Q9H2A2 487 aaPredicted RBP9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 EPB41L1Q9H4G0 881 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 EBF3Q9H4W6 596 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 TMOD3Q9NYL9 352 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 HPS5Q9UPZ3 1129 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 ERVK-11Q9UQG0 969 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 TDRD9Q8NDG6 1382 aaKnown RBP9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 PDZK1P1A8MUH7 402 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 M0R3G1 203 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 BAG3O95817 575 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 CHRM5P08912 532 aaPredicted RBP9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 PSMC3P17980 439 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 ATP2B4P23634 1241 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 CASP2P42575 452 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 TAP1Q03518 808 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 ANKS6Q68DC2 871 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 KCNK18Q7Z418 384 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 AMIGO2Q86SJ2 522 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 OSTM1Q86WC4 334 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 LINC00301Q8NCQ3 95 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 ZSWIM2Q8NEG5 633 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 NARS2Q96I59 477 aaKnown RBP9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 TUBGCP2Q9BSJ2 902 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 ZNF212Q9UDV6 495 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 FETUBQ9UGM5 382 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 DDX25Q9UHL0 483 aaKnown RBP9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 GPR75-ASB3A0A0A6YYF3 556 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 ARHGEF37A1IGU5 675 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 I3L521 148 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 PPP2R2BQ00005 443 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 TFCP2Q12800 502 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 MESDQ14696 234 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 FAM214AQ32MH5 1076 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 PPM1LQ5SGD2 360 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 KRT74Q7RTS7 529 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 NSUN7Q8NE18 718 aaKnown RBP9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 RUBCNLQ9H714 662 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 ASB3Q9Y575 518 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 RPRD2Q5VT52 1461 aaKnown RBP9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 SIN3BO75182 1162 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 TP53P04637 393 aaPredicted RBP9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 PTPN4P29074 926 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 TOP3AQ13472 1001 aaPredicted RBP9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 ZFP69Q49AA0 526 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 GPR107Q5VW38 600 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 TTI2Q6NXR4 508 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 GALNT18Q6P9A2 607 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 TERB1Q8NA31 727 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 NSL1Q96IY1 281 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 CNOT6LQ96LI5 555 aaKnown RBP9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 IARS2Q9NSE4 1012 aaKnown RBP9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 HMGXB4Q9UGU5 601 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 AFF2P51816 1311 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 C2orf74A8MZ97 194 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 FAM25AB3EWG3 89 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 FAM25CB3EWG5 89 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 FAM25GB3EWG6 89 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 TNFAIP8O95379 198 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 MYBPC1Q00872 1141 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 MLLT1Q03111 559 aaPredicted RBP9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 PTK7Q13308 1070 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 LRRC41Q15345 812 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 KHDC1Q4VXA5 237 aaKnown RBP9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 CASC4Q6P4E1 433 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 TTC33Q6PID6 262 aaPredicted RBP9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 TMC7Q7Z402 723 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 DNAAF5Q86Y56 855 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 LNX2Q8N448 690 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 OR6Y1Q8NGX8 325 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 CNDP1Q96KN2 507 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 ING2Q9H160 280 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 SIRPGQ9P1W8 387 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 PFDN2Q9UHV9 154 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 C15orf38-AP3S2A0A0A6YYH1 394 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms