RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 PATJQ8NI35 1801 aa12.91□□□□□ -0.34
SRP54-203ENST00000553544 H7C4K7 107 aa12.91□□□□□ -0.34
SRP54-203ENST00000553544 I3L4J1 428 aa12.91□□□□□ -0.34
SRP54-203ENST00000553544 SLC26A4O43511 780 aa12.91□□□□□ -0.34
SRP54-203ENST00000553544 HIP1RO75146 1068 aa12.91□□□□□ -0.34
SRP54-203ENST00000553544 BMP15O95972 392 aa12.91□□□□□ -0.34
SRP54-203ENST00000553544 PDCP20941 246 aa12.91□□□□□ -0.34
SRP54-203ENST00000553544 SYT1P21579 422 aa12.91□□□□□ -0.34
SRP54-203ENST00000553544 GUCY2CP25092 1073 aa12.91□□□□□ -0.34
SRP54-203ENST00000553544 VIPR2P41587 438 aa12.91□□□□□ -0.34
SRP54-203ENST00000553544 NPTX2P47972 431 aa12.91□□□□□ -0.34
SRP54-203ENST00000553544 ROR1Q01973 937 aa12.91□□□□□ -0.34
SRP54-203ENST00000553544 C1QBPQ07021 282 aaKnown RBP12.91□□□□□ -0.34
SRP54-203ENST00000553544 LRRC32Q14392 662 aa12.91□□□□□ -0.34
SRP54-203ENST00000553544 DCAF4L1Q3SXM0 396 aa12.91□□□□□ -0.34
SRP54-203ENST00000553544 TMEM119Q4V9L6 283 aa12.91□□□□□ -0.34
SRP54-203ENST00000553544 NT5DC1Q5TFE4 455 aa12.91□□□□□ -0.34
SRP54-203ENST00000553544 TPGS2Q68CL5 300 aa12.91□□□□□ -0.34
SRP54-203ENST00000553544 VITQ6UXI7 678 aa12.91□□□□□ -0.34
SRP54-203ENST00000553544 CEP68Q76N32 757 aa12.91□□□□□ -0.34
SRP54-203ENST00000553544 SYT2Q8N9I0 419 aaPredicted RBP12.91□□□□□ -0.34
SRP54-203ENST00000553544 LEMD2Q8NC56 503 aa12.91□□□□□ -0.34
SRP54-203ENST00000553544 CSGALNACT1Q8TDX6 532 aa12.91□□□□□ -0.34
SRP54-203ENST00000553544 NTPCRQ9BSD7 190 aaKnown RBP12.91□□□□□ -0.34
SRP54-203ENST00000553544 KIFC3Q9BVG8 833 aa12.91□□□□□ -0.34
SRP54-203ENST00000553544 TIPINQ9BVW5 301 aa12.91□□□□□ -0.34
SRP54-203ENST00000553544 GPR88Q9GZN0 384 aa12.91□□□□□ -0.34
SRP54-203ENST00000553544 C17orf75Q9HAS0 396 aa12.91□□□□□ -0.34
SRP54-203ENST00000553544 TRPV4Q9HBA0 871 aa12.91□□□□□ -0.34
SRP54-203ENST00000553544 MAFFQ9ULX9 164 aa12.91□□□□□ -0.34
SRP54-203ENST00000553544 USP20Q9Y2K6 914 aa12.91□□□□□ -0.34
SRP54-203ENST00000553544 SMIM28A0A1B0GU29 152 aa12.9□□□□□ -0.34
SRP54-203ENST00000553544 PAPSS2O95340 614 aaPredicted RBP12.9□□□□□ -0.34
SRP54-203ENST00000553544 SEC24AO95486 1093 aa12.9□□□□□ -0.34
SRP54-203ENST00000553544 CCR2P41597 374 aa12.9□□□□□ -0.34
SRP54-203ENST00000553544 BRCC3P46736 316 aa12.9□□□□□ -0.34
SRP54-203ENST00000553544 SLC12A3P55017 1021 aa12.9□□□□□ -0.34
SRP54-203ENST00000553544 PEX3P56589 373 aa12.9□□□□□ -0.34
SRP54-203ENST00000553544 GRIN1Q05586 938 aa12.9□□□□□ -0.34
SRP54-203ENST00000553544 GAS6Q14393 721 aa12.9□□□□□ -0.34
SRP54-203ENST00000553544 SF3A1Q15459 793 aaKnown RBP12.9□□□□□ -0.34
SRP54-203ENST00000553544 GLRA4Q5JXX5 417 aa12.9□□□□□ -0.34
SRP54-203ENST00000553544 DGKKQ5KSL6 1271 aa12.9□□□□□ -0.34
SRP54-203ENST00000553544 N4BP2L1Q5TBK1 243 aaPredicted RBP12.9□□□□□ -0.34
SRP54-203ENST00000553544 EEF1DP3Q658K8 133 aa12.9□□□□□ -0.34
SRP54-203ENST00000553544 TAS1R3Q7RTX0 852 aa12.9□□□□□ -0.34
SRP54-203ENST00000553544 YAF2Q8IY57 180 aa12.9□□□□□ -0.34
SRP54-203ENST00000553544 MSANTD3Q96H12 275 aa12.9□□□□□ -0.34
SRP54-203ENST00000553544 TMEM134Q9H6X4 195 aa12.9□□□□□ -0.34
SRP54-203ENST00000553544 C8orf33Q9H7E9 229 aaPredicted RBP12.9□□□□□ -0.34
SRP54-203ENST00000553544 ARHGAP28Q9P2N2 729 aa12.9□□□□□ -0.34
SRP54-203ENST00000553544 INSL5Q9Y5Q6 135 aa12.9□□□□□ -0.34
SRP54-203ENST00000553544 VPS37CA5D8V6 355 aaPredicted RBP12.89□□□□□ -0.35
SRP54-203ENST00000553544 HEPACAM2A8MVW5 462 aa12.89□□□□□ -0.35
SRP54-203ENST00000553544 K7ELQ4 463 aaPredicted RBP12.89□□□□□ -0.35
SRP54-203ENST00000553544 K7ERI5 159 aa12.89□□□□□ -0.35
SRP54-203ENST00000553544 NRG2O14511 850 aaPredicted RBP12.89□□□□□ -0.35
SRP54-203ENST00000553544 SYN3O14994 580 aa12.89□□□□□ -0.35
SRP54-203ENST00000553544 MYL4P12829 197 aa12.89□□□□□ -0.35
SRP54-203ENST00000553544 HOXA6P31267 233 aa12.89□□□□□ -0.35
SRP54-203ENST00000553544 KPNA1P52294 538 aaPredicted RBP12.89□□□□□ -0.35
SRP54-203ENST00000553544 LIMK1P53667 647 aa12.89□□□□□ -0.35
SRP54-203ENST00000553544 YARSP54577 528 aaKnown RBP12.89□□□□□ -0.35
SRP54-203ENST00000553544 RESTQ13127 1097 aa12.89□□□□□ -0.35
SRP54-203ENST00000553544 SRSF5Q13243 272 aaKnown RBP12.89□□□□□ -0.35
SRP54-203ENST00000553544 MRPL58Q14197 206 aaKnown RBP12.89□□□□□ -0.35
SRP54-203ENST00000553544 PTPAQ15257 358 aa12.89□□□□□ -0.35
SRP54-203ENST00000553544 AASDHQ4L235 1098 aaPredicted RBP12.89□□□□□ -0.35
SRP54-203ENST00000553544 HEATR6Q6AI08 1181 aaKnown RBP12.89□□□□□ -0.35
SRP54-203ENST00000553544 HS6ST3Q8IZP7 471 aa12.89□□□□□ -0.35
SRP54-203ENST00000553544 FAM160A2Q8N612 972 aaPredicted RBP12.89□□□□□ -0.35
SRP54-203ENST00000553544 C3orf58Q8NDZ4 430 aa12.89□□□□□ -0.35
SRP54-203ENST00000553544 ZSCAN18Q8TBC5 510 aaPredicted RBP12.89□□□□□ -0.35
SRP54-203ENST00000553544 LRRC15Q8TF66 581 aa12.89□□□□□ -0.35
SRP54-203ENST00000553544 DRC1Q96MC2 740 aa12.89□□□□□ -0.35
SRP54-203ENST00000553544 GOLGA2P5Q9HBQ8 144 aa12.89□□□□□ -0.35
SRP54-203ENST00000553544 PTPRHQ9HD43 1115 aa12.89□□□□□ -0.35
SRP54-203ENST00000553544 ASAH2Q9NR71 780 aa12.89□□□□□ -0.35
SRP54-203ENST00000553544 TOPORSQ9NS56 1045 aaPredicted RBP12.89□□□□□ -0.35
SRP54-203ENST00000553544 SLC38A7Q9NVC3 462 aa12.89□□□□□ -0.35
SRP54-203ENST00000553544 KCND2Q9NZV8 630 aa12.89□□□□□ -0.35
SRP54-203ENST00000553544 TNFSF13BQ9Y275 285 aa12.89□□□□□ -0.35
SRP54-203ENST00000553544 RBM19Q9Y4C8 960 aaKnown RBP12.89□□□□□ -0.35
SRP54-203ENST00000553544 PHLPP2Q6ZVD8 1323 aa12.88□□□□□ -0.35
SRP54-203ENST00000553544 CCDC169A6NNP5 214 aa12.88□□□□□ -0.35
SRP54-203ENST00000553544 SFI1A8K8P3 1242 aa12.88□□□□□ -0.35
SRP54-203ENST00000553544 K7ESF4 209 aa12.88□□□□□ -0.35
SRP54-203ENST00000553544 AXIN1O15169 862 aa12.88□□□□□ -0.35
SRP54-203ENST00000553544 CHADO15335 359 aa12.88□□□□□ -0.35
SRP54-203ENST00000553544 PLA2G4BP0C869 781 aa12.88□□□□□ -0.35
SRP54-203ENST00000553544 PMLP29590 882 aa12.88□□□□□ -0.35
SRP54-203ENST00000553544 RPL9P32969 192 aaKnown RBP12.88□□□□□ -0.35
SRP54-203ENST00000553544 LONP1P36776 959 aaKnown RBP12.88□□□□□ -0.35
SRP54-203ENST00000553544 SHC2P98077 582 aa12.88□□□□□ -0.35
SRP54-203ENST00000553544 DMP1Q13316 513 aaPredicted RBP12.88□□□□□ -0.35
SRP54-203ENST00000553544 ZRSR1Q15695 479 aaKnown RBP12.88□□□□□ -0.35
SRP54-203ENST00000553544 CTXN3Q4LDR2 81 aa12.88□□□□□ -0.35
SRP54-203ENST00000553544 ARSHQ5FYA8 562 aa12.88□□□□□ -0.35
SRP54-203ENST00000553544 ATF7IP2Q5U623 682 aa12.88□□□□□ -0.35
SRP54-203ENST00000553544 ALKAL1Q6UXT8 129 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms