RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 ECHDC2Q86YB7 292 aa18.84■□□□□ 0.61
PSEN1-206ENST00000553447 LRRC52Q8N7C0 313 aa18.84■□□□□ 0.61
PSEN1-206ENST00000553447 SLC20A1Q8WUM9 679 aa18.84■□□□□ 0.61
PSEN1-206ENST00000553447 ZFP42Q96MM3 310 aa18.84■□□□□ 0.61
PSEN1-206ENST00000553447 PPP1R10Q96QC0 940 aaKnown RBP18.84■□□□□ 0.61
PSEN1-206ENST00000553447 RPS6KC1Q96S38 1066 aa18.84■□□□□ 0.61
PSEN1-206ENST00000553447 GAD1Q99259 594 aa18.84■□□□□ 0.61
PSEN1-206ENST00000553447 FTHL17Q9BXU8 183 aa18.84■□□□□ 0.61
PSEN1-206ENST00000553447 BCO2Q9BYV7 579 aa18.84■□□□□ 0.61
PSEN1-206ENST00000553447 C11orf49Q9H6J7 331 aa18.84■□□□□ 0.61
PSEN1-206ENST00000553447 LUC7LQ9NQ29 371 aaKnown RBP18.84■□□□□ 0.61
PSEN1-206ENST00000553447 NAGPAQ9UK23 515 aa18.84■□□□□ 0.61
PSEN1-206ENST00000553447 RCCD1A6NED2 376 aa18.83■□□□□ 0.6
PSEN1-206ENST00000553447 PIRO00625 290 aa18.83■□□□□ 0.6
PSEN1-206ENST00000553447 PPEF2O14830 753 aa18.83■□□□□ 0.6
PSEN1-206ENST00000553447 P4HA1P13674 534 aa18.83■□□□□ 0.6
PSEN1-206ENST00000553447 CAPN2P17655 700 aa18.83■□□□□ 0.6
PSEN1-206ENST00000553447 CHRNB2P17787 502 aa18.83■□□□□ 0.6
PSEN1-206ENST00000553447 BPIFB4P59827 614 aa18.83■□□□□ 0.6
PSEN1-206ENST00000553447 SOX4Q06945 474 aaPredicted RBP18.83■□□□□ 0.6
PSEN1-206ENST00000553447 MYO1EQ12965 1108 aa18.83■□□□□ 0.6
PSEN1-206ENST00000553447 NAB2Q15742 525 aa18.83■□□□□ 0.6
PSEN1-206ENST00000553447 C10orf76Q5T2E6 689 aa18.83■□□□□ 0.6
PSEN1-206ENST00000553447 TMEM270Q6UE05 265 aa18.83■□□□□ 0.6
PSEN1-206ENST00000553447 ZNF598Q86UK7 904 aaKnown RBP18.83■□□□□ 0.6
PSEN1-206ENST00000553447 RTN4RL1Q86UN2 441 aaPredicted RBP18.83■□□□□ 0.6
PSEN1-206ENST00000553447 GLYCTKQ8IVS8 523 aa18.83■□□□□ 0.6
PSEN1-206ENST00000553447 RPUSD2Q8IZ73 545 aaKnown RBP18.83■□□□□ 0.6
PSEN1-206ENST00000553447 TXLNBQ8N3L3 684 aa18.83■□□□□ 0.6
PSEN1-206ENST00000553447 RBBP8NLQ8NC74 664 aaPredicted RBP18.83■□□□□ 0.6
PSEN1-206ENST00000553447 GSTCDQ8NEC7 633 aa18.83■□□□□ 0.6
PSEN1-206ENST00000553447 LINC01599Q8WXQ3 324 aa18.83■□□□□ 0.6
PSEN1-206ENST00000553447 HIPK3Q9H422 1215 aa18.83■□□□□ 0.6
PSEN1-206ENST00000553447 RSAD1Q9HA92 442 aa18.83■□□□□ 0.6
PSEN1-206ENST00000553447 UBN1Q9NPG3 1134 aa18.83■□□□□ 0.6
PSEN1-206ENST00000553447 ACP6Q9NPH0 428 aa18.83■□□□□ 0.6
PSEN1-206ENST00000553447 CISHQ9NSE2 258 aa18.83■□□□□ 0.6
PSEN1-206ENST00000553447 SLC38A7Q9NVC3 462 aa18.83■□□□□ 0.6
PSEN1-206ENST00000553447 TFR2Q9UP52 801 aa18.83■□□□□ 0.6
PSEN1-206ENST00000553447 ATP8B3O60423 1300 aa18.82■□□□□ 0.6
PSEN1-206ENST00000553447 ARL5CA6NH57 179 aa18.82■□□□□ 0.6
PSEN1-206ENST00000553447 C9IYK1 514 aa18.82■□□□□ 0.6
PSEN1-206ENST00000553447 KIF2AO00139 706 aaPredicted RBP18.82■□□□□ 0.6
PSEN1-206ENST00000553447 PJA2O43164 708 aa18.82■□□□□ 0.6
PSEN1-206ENST00000553447 WEE2P0C1S8 567 aa18.82■□□□□ 0.6
PSEN1-206ENST00000553447 TNNT1P13805 278 aa18.82■□□□□ 0.6
PSEN1-206ENST00000553447 CD58P19256 250 aa18.82■□□□□ 0.6
PSEN1-206ENST00000553447 ZNF132P52740 706 aa18.82■□□□□ 0.6
PSEN1-206ENST00000553447 TNNC1P63316 161 aa18.82■□□□□ 0.6
PSEN1-206ENST00000553447 CDR2Q01850 454 aa18.82■□□□□ 0.6
PSEN1-206ENST00000553447 PLEKHG4Q58EX7 1191 aa18.82■□□□□ 0.6
PSEN1-206ENST00000553447 CCDC122Q5T0U0 273 aa18.82■□□□□ 0.6
PSEN1-206ENST00000553447 ALKBH5Q6P6C2 394 aaKnown RBP18.82■□□□□ 0.6
PSEN1-206ENST00000553447 FAM43BQ6ZT52 329 aaPredicted RBP18.82■□□□□ 0.6
PSEN1-206ENST00000553447 RNF169Q8NCN4 708 aa18.82■□□□□ 0.6
PSEN1-206ENST00000553447 DDX1Q92499 740 aaKnown RBP18.82■□□□□ 0.6
PSEN1-206ENST00000553447 ZNF560Q96MR9 790 aa18.82■□□□□ 0.6
PSEN1-206ENST00000553447 TSGA10Q9BZW7 698 aa18.82■□□□□ 0.6
PSEN1-206ENST00000553447 LACRTQ9GZZ8 138 aa18.82■□□□□ 0.6
PSEN1-206ENST00000553447 SDCBP2Q9H190 292 aa18.82■□□□□ 0.6
PSEN1-206ENST00000553447 SMYD3Q9H7B4 428 aa18.82■□□□□ 0.6
PSEN1-206ENST00000553447 CYP3A43Q9HB55 503 aa18.82■□□□□ 0.6
PSEN1-206ENST00000553447 MIOSQ9NXC5 875 aa18.82■□□□□ 0.6
PSEN1-206ENST00000553447 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.82■□□□□ 0.6
PSEN1-206ENST00000553447 PARNO95453 639 aaKnown RBP18.81■□□□□ 0.6
PSEN1-206ENST00000553447 ABL1P00519 1130 aa18.81■□□□□ 0.6
PSEN1-206ENST00000553447 TUBB4AP04350 444 aa18.81■□□□□ 0.6
PSEN1-206ENST00000553447 LRPAP1P30533 357 aa18.81■□□□□ 0.6
PSEN1-206ENST00000553447 RAP1GAPP47736 663 aa18.81■□□□□ 0.6
PSEN1-206ENST00000553447 FMO1Q01740 532 aa18.81■□□□□ 0.6
PSEN1-206ENST00000553447 KIF5AQ12840 1032 aa18.81■□□□□ 0.6
PSEN1-206ENST00000553447 DNTTIP2Q5QJE6 756 aaKnown RBP18.81■□□□□ 0.6
PSEN1-206ENST00000553447 TAF3Q5VWG9 929 aa18.81■□□□□ 0.6
PSEN1-206ENST00000553447 SLC24A5Q71RS6 500 aa18.81■□□□□ 0.6
PSEN1-206ENST00000553447 ZNF677Q86XU0 584 aa18.81■□□□□ 0.6
PSEN1-206ENST00000553447 SEPT8Q92599 483 aa18.81■□□□□ 0.6
PSEN1-206ENST00000553447 PAWRQ96IZ0 340 aaKnown RBP18.81■□□□□ 0.6
PSEN1-206ENST00000553447 TMEM106CQ9BVX2 250 aa18.81■□□□□ 0.6
PSEN1-206ENST00000553447 TSPYL2Q9H2G4 693 aaPredicted RBP18.81■□□□□ 0.6
PSEN1-206ENST00000553447 FAM124BQ9H5Z6 455 aaPredicted RBP18.81■□□□□ 0.6
PSEN1-206ENST00000553447 GOLGA2P5Q9HBQ8 144 aa18.81■□□□□ 0.6
PSEN1-206ENST00000553447 SEPT11Q9NVA2 429 aaKnown RBP18.81■□□□□ 0.6
PSEN1-206ENST00000553447 TRIM10Q9UDY6 481 aa18.81■□□□□ 0.6
PSEN1-206ENST00000553447 ATP11BQ9Y2G3 1177 aa18.81■□□□□ 0.6
PSEN1-206ENST00000553447 TET1Q8NFU7 2136 aa18.8■□□□□ 0.6
PSEN1-206ENST00000553447 KRT86O43790 486 aa18.8■□□□□ 0.6
PSEN1-206ENST00000553447 EOMESO95936 686 aa18.8■□□□□ 0.6
PSEN1-206ENST00000553447 CALCAP01258 141 aa18.8■□□□□ 0.6
PSEN1-206ENST00000553447 THP07101 528 aa18.8■□□□□ 0.6
PSEN1-206ENST00000553447 MMEP08473 750 aa18.8■□□□□ 0.6
PSEN1-206ENST00000553447 IBSPP21815 317 aaPredicted RBP18.8■□□□□ 0.6
PSEN1-206ENST00000553447 GNA15P30679 374 aa18.8■□□□□ 0.6
PSEN1-206ENST00000553447 PNPLA4P41247 253 aa18.8■□□□□ 0.6
PSEN1-206ENST00000553447 SCNN1GP51170 649 aa18.8■□□□□ 0.6
PSEN1-206ENST00000553447 AFF1P51825 1210 aaKnown RBP18.8■□□□□ 0.6
PSEN1-206ENST00000553447 CDH8P55286 799 aa18.8■□□□□ 0.6
PSEN1-206ENST00000553447 FAM189BP81408 668 aa18.8■□□□□ 0.6
PSEN1-206ENST00000553447 DBF4BQ8NFT6 615 aa18.8■□□□□ 0.6
PSEN1-206ENST00000553447 APBB2Q92870 758 aa18.8■□□□□ 0.6
PSEN1-206ENST00000553447 PCDHB18PQ96TA0 734 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms