RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 SBK3P0C264 359 aa6.19□□□□□ -1.42
ATXN3-217ENST00000553287 MTHFD1P11586 935 aaKnown RBP6.19□□□□□ -1.42
ATXN3-217ENST00000553287 PROZP22891 400 aa6.19□□□□□ -1.42
ATXN3-217ENST00000553287 ADKP55263 362 aaKnown RBP6.19□□□□□ -1.42
ATXN3-217ENST00000553287 ZNF280AP59817 542 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-217ENST00000553287 NOMO3P69849 1222 aa6.19□□□□□ -1.42
ATXN3-217ENST00000553287 BRDTQ58F21 947 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-217ENST00000553287 NOMO2Q5JPE7 1267 aa6.19□□□□□ -1.42
ATXN3-217ENST00000553287 HECTD2Q5U5R9 776 aa6.19□□□□□ -1.42
ATXN3-217ENST00000553287 ABHD17BQ5VST6 288 aa6.19□□□□□ -1.42
ATXN3-217ENST00000553287 GADL1Q6ZQY3 521 aa6.19□□□□□ -1.42
ATXN3-217ENST00000553287 BEND2Q8NDZ0 799 aa6.19□□□□□ -1.42
ATXN3-217ENST00000553287 NUP133Q8WUM0 1156 aa6.19□□□□□ -1.42
ATXN3-217ENST00000553287 RNF31Q96EP0 1072 aa6.19□□□□□ -1.42
ATXN3-217ENST00000553287 BOD1Q96IK1 185 aa6.19□□□□□ -1.42
ATXN3-217ENST00000553287 DMRTA2Q96SC8 542 aa6.19□□□□□ -1.42
ATXN3-217ENST00000553287 BRINP2Q9C0B6 783 aa6.19□□□□□ -1.42
ATXN3-217ENST00000553287 TOR3AQ9H497 397 aa6.19□□□□□ -1.42
ATXN3-217ENST00000553287 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-217ENST00000553287 USP25Q9UHP3 1055 aa6.19□□□□□ -1.42
ATXN3-217ENST00000553287 SERPINB13Q9UIV8 391 aa6.19□□□□□ -1.42
ATXN3-217ENST00000553287 MTO1Q9Y2Z2 717 aaKnown RBP6.19□□□□□ -1.42
ATXN3-217ENST00000553287 RPLP2P05387 115 aaKnown RBP6.18□□□□□ -1.42
ATXN3-217ENST00000553287 EGR2P11161 476 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-217ENST00000553287 SLC6A4P31645 630 aa6.18□□□□□ -1.42
ATXN3-217ENST00000553287 CXADRP78310 365 aa6.18□□□□□ -1.42
ATXN3-217ENST00000553287 RAB39AQ14964 217 aa6.18□□□□□ -1.42
ATXN3-217ENST00000553287 SMN1Q16637 294 aaKnown RBP6.18□□□□□ -1.42
ATXN3-217ENST00000553287 PABPC1LQ4VXU2 614 aaKnown RBP6.18□□□□□ -1.42
ATXN3-217ENST00000553287 Q6YL49 198 aa6.18□□□□□ -1.42
ATXN3-217ENST00000553287 MIER2Q8N344 545 aa6.18□□□□□ -1.42
ATXN3-217ENST00000553287 IL17RDQ8NFM7 739 aa6.18□□□□□ -1.42
ATXN3-217ENST00000553287 ASB10Q8WXI3 467 aa6.18□□□□□ -1.42
ATXN3-217ENST00000553287 CAVIN3Q969G5 261 aa6.18□□□□□ -1.42
ATXN3-217ENST00000553287 GPATCH3Q96I76 525 aa6.18□□□□□ -1.42
ATXN3-217ENST00000553287 MRGPRX4Q96LA9 322 aa6.18□□□□□ -1.42
ATXN3-217ENST00000553287 PNKPQ96T60 521 aa6.18□□□□□ -1.42
ATXN3-217ENST00000553287 GALNT9Q9HCQ5 603 aa6.18□□□□□ -1.42
ATXN3-217ENST00000553287 SYBUQ9NX95 663 aa6.18□□□□□ -1.42
ATXN3-217ENST00000553287 NOP58Q9Y2X3 529 aaKnown RBP6.18□□□□□ -1.42
ATXN3-217ENST00000553287 ERN1O75460 977 aaKnown RBP6.17□□□□□ -1.42
ATXN3-217ENST00000553287 SNUPNO95149 360 aaKnown RBP6.17□□□□□ -1.42
ATXN3-217ENST00000553287 HKR1P10072 659 aa6.17□□□□□ -1.42
ATXN3-217ENST00000553287 ITGAMP11215 1152 aa6.17□□□□□ -1.42
ATXN3-217ENST00000553287 RECQLP46063 649 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-217ENST00000553287 AVPR1BP47901 424 aa6.17□□□□□ -1.42
ATXN3-217ENST00000553287 INHBEP58166 350 aa6.17□□□□□ -1.42
ATXN3-217ENST00000553287 UTP14CQ5TAP6 766 aaKnown RBP6.17□□□□□ -1.42
ATXN3-217ENST00000553287 GPR149Q86SP6 731 aa6.17□□□□□ -1.42
ATXN3-217ENST00000553287 TTC7BQ86TV6 843 aa6.17□□□□□ -1.42
ATXN3-217ENST00000553287 NACC2Q96BF6 587 aa6.17□□□□□ -1.42
ATXN3-217ENST00000553287 ZG16BQ96DA0 208 aa6.17□□□□□ -1.42
ATXN3-217ENST00000553287 TMEM74BQ9NUR3 256 aa6.17□□□□□ -1.42
ATXN3-217ENST00000553287 CALCOCO1Q9P1Z2 691 aa6.17□□□□□ -1.42
ATXN3-217ENST00000553287 HSFX1Q9UBD0 423 aa6.17□□□□□ -1.42
ATXN3-217ENST00000553287 TESQ9UGI8 421 aaKnown RBP6.17□□□□□ -1.42
ATXN3-217ENST00000553287 EPN1Q9Y6I3 576 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-217ENST00000553287 PREX1Q8TCU6 1659 aa6.17□□□□□ -1.42
ATXN3-217ENST00000553287 NEO1Q92859 1461 aa6.16□□□□□ -1.42
ATXN3-217ENST00000553287 HAUS5O94927 633 aa6.16□□□□□ -1.42
ATXN3-217ENST00000553287 AGFG2O95081 481 aa6.16□□□□□ -1.42
ATXN3-217ENST00000553287 BLOC1S1P78537 153 aa6.16□□□□□ -1.42
ATXN3-217ENST00000553287 DSC2Q02487 901 aa6.16□□□□□ -1.42
ATXN3-217ENST00000553287 COL10A1Q03692 680 aa6.16□□□□□ -1.42
ATXN3-217ENST00000553287 TLE1Q04724 770 aa6.16□□□□□ -1.42
ATXN3-217ENST00000553287 CYP2A13Q16696 494 aa6.16□□□□□ -1.42
ATXN3-217ENST00000553287 KRTAP15-1Q3LI76 137 aa6.16□□□□□ -1.42
ATXN3-217ENST00000553287 KHDC1Q4VXA5 237 aaKnown RBP6.16□□□□□ -1.42
ATXN3-217ENST00000553287 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-217ENST00000553287 FAM177A1Q8N128 213 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-217ENST00000553287 LINC00476Q8WZB0 136 aa6.16□□□□□ -1.42
ATXN3-217ENST00000553287 COQ10AQ96MF6 247 aa6.16□□□□□ -1.42
ATXN3-217ENST00000553287 VRK1Q99986 396 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-217ENST00000553287 KCNE5Q9UJ90 142 aa6.16□□□□□ -1.42
ATXN3-217ENST00000553287 CFAP20Q9Y6A4 193 aaKnown RBP6.16□□□□□ -1.42
ATXN3-217ENST00000553287 DENND4BO75064 1496 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-217ENST00000553287 TTC37Q6PGP7 1564 aa6.15□□□□□ -1.42
ATXN3-217ENST00000553287 HECW1Q76N89 1606 aa6.15□□□□□ -1.42
ATXN3-217ENST00000553287 ZRANB2O95218 330 aaKnown RBP eCLIP6.15□□□□□ -1.42
ATXN3-217ENST00000553287 FCER1AP12319 257 aa6.15□□□□□ -1.42
ATXN3-217ENST00000553287 TGM1P22735 817 aa6.15□□□□□ -1.42
ATXN3-217ENST00000553287 SLFN5Q08AF3 891 aa6.15□□□□□ -1.42
ATXN3-217ENST00000553287 SCAPQ12770 1279 aa6.15□□□□□ -1.42
ATXN3-217ENST00000553287 FOXI1Q12951 378 aa6.15□□□□□ -1.42
ATXN3-217ENST00000553287 NSUN6Q8TEA1 469 aaKnown RBP6.15□□□□□ -1.42
ATXN3-217ENST00000553287 Q96MF0 132 aa6.15□□□□□ -1.42
ATXN3-217ENST00000553287 MED15Q96RN5 788 aa6.15□□□□□ -1.42
ATXN3-217ENST00000553287 PACSIN1Q9BY11 444 aa6.15□□□□□ -1.42
ATXN3-217ENST00000553287 MAN1C1Q9NR34 630 aa6.15□□□□□ -1.42
ATXN3-217ENST00000553287 TBCCD1Q9NVR7 557 aa6.15□□□□□ -1.42
ATXN3-217ENST00000553287 JKAMPQ9P055 326 aa6.15□□□□□ -1.42
ATXN3-217ENST00000553287 AKNAQ7Z591 1439 aa6.15□□□□□ -1.43
ATXN3-217ENST00000553287 FANCAO15360 1455 aa6.15□□□□□ -1.43
ATXN3-217ENST00000553287 ZFYVE16Q7Z3T8 1539 aa6.15□□□□□ -1.43
ATXN3-217ENST00000553287 LTBP4Q8N2S1 1624 aa6.14□□□□□ -1.43
ATXN3-217ENST00000553287 MYADML2A6NDP7 307 aa6.14□□□□□ -1.43
ATXN3-217ENST00000553287 SLC43A1O75387 559 aa6.14□□□□□ -1.43
ATXN3-217ENST00000553287 PDCP20941 246 aa6.14□□□□□ -1.43
ATXN3-217ENST00000553287 MALP21145 153 aa6.14□□□□□ -1.43
ATXN3-217ENST00000553287 BMP5P22003 454 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms