RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 CCDC38Q502W7 563 aa6.06□□□□□ -1.44
SCFD1-209ENST00000553280 ZMAT1Q5H9K5 638 aa6.06□□□□□ -1.44
SCFD1-209ENST00000553280 AFMIDQ63HM1 303 aa6.06□□□□□ -1.44
SCFD1-209ENST00000553280 KRT40Q6A162 431 aa6.06□□□□□ -1.44
SCFD1-209ENST00000553280 ZNF783Q6ZMS7 281 aa6.06□□□□□ -1.44
SCFD1-209ENST00000553280 SEM1Q6ZVN7 128 aa6.06□□□□□ -1.44
SCFD1-209ENST00000553280 PRRT2Q7Z6L0 340 aaPredicted RBP6.06□□□□□ -1.44
SCFD1-209ENST00000553280 ZNF761Q86XN6 746 aaPredicted RBP6.06□□□□□ -1.44
SCFD1-209ENST00000553280 CMTM4Q8IZR5 234 aa6.06□□□□□ -1.44
SCFD1-209ENST00000553280 KLHL36Q8N4N3 616 aa6.06□□□□□ -1.44
SCFD1-209ENST00000553280 ZNF527Q8NB42 609 aa6.06□□□□□ -1.44
SCFD1-209ENST00000553280 OR5M3Q8NGP4 307 aa6.06□□□□□ -1.44
SCFD1-209ENST00000553280 ADAMTS17Q8TE56 1095 aa6.06□□□□□ -1.44
SCFD1-209ENST00000553280 MAML1Q92585 1016 aa6.06□□□□□ -1.44
SCFD1-209ENST00000553280 KRTAP9-3Q9BYQ3 159 aa6.06□□□□□ -1.44
SCFD1-209ENST00000553280 MYLK2Q9H1R3 596 aa6.06□□□□□ -1.44
SCFD1-209ENST00000553280 KCNH6Q9H252 994 aa6.06□□□□□ -1.44
SCFD1-209ENST00000553280 BARX1Q9HBU1 254 aaPredicted RBP6.06□□□□□ -1.44
SCFD1-209ENST00000553280 SLC23A1Q9UHI7 598 aa6.06□□□□□ -1.44
SCFD1-209ENST00000553280 PNMA2Q9UL42 364 aa6.06□□□□□ -1.44
SCFD1-209ENST00000553280 MAGED2Q9UNF1 606 aaPredicted RBP6.06□□□□□ -1.44
SCFD1-209ENST00000553280 ZMYM3Q14202 1370 aa6.06□□□□□ -1.44
SCFD1-209ENST00000553280 HMGB1P1B2RPK0 211 aaPredicted RBP6.05□□□□□ -1.44
SCFD1-209ENST00000553280 SLC43A1O75387 559 aa6.05□□□□□ -1.44
SCFD1-209ENST00000553280 ABHD16AO95870 558 aa6.05□□□□□ -1.44
SCFD1-209ENST00000553280 CSTBP04080 98 aaKnown RBP6.05□□□□□ -1.44
SCFD1-209ENST00000553280 CYP1A1P04798 512 aaPredicted RBP6.05□□□□□ -1.44
SCFD1-209ENST00000553280 GNAI3P08754 354 aa6.05□□□□□ -1.44
SCFD1-209ENST00000553280 CD53P19397 219 aa6.05□□□□□ -1.44
SCFD1-209ENST00000553280 FGFR2P21802 821 aa6.05□□□□□ -1.44
SCFD1-209ENST00000553280 KCNJ5P48544 419 aa6.05□□□□□ -1.44
SCFD1-209ENST00000553280 GZMKP49863 264 aa6.05□□□□□ -1.44
SCFD1-209ENST00000553280 RRADP55042 308 aa6.05□□□□□ -1.44
SCFD1-209ENST00000553280 GNAI1P63096 354 aa6.05□□□□□ -1.44
SCFD1-209ENST00000553280 PTH1RQ03431 593 aa6.05□□□□□ -1.44
SCFD1-209ENST00000553280 SLC13A2Q13183 592 aa6.05□□□□□ -1.44
SCFD1-209ENST00000553280 BLMHQ13867 455 aa6.05□□□□□ -1.44
SCFD1-209ENST00000553280 HABP2Q14520 560 aaPredicted RBP6.05□□□□□ -1.44
SCFD1-209ENST00000553280 ACAP1Q15027 740 aa6.05□□□□□ -1.44
SCFD1-209ENST00000553280 TBR1Q16650 682 aa6.05□□□□□ -1.44
SCFD1-209ENST00000553280 ALFQ53S48 1182 aa6.05□□□□□ -1.44
SCFD1-209ENST00000553280 ZFYVE27Q5T4F4 411 aa6.05□□□□□ -1.44
SCFD1-209ENST00000553280 BEND5Q7L4P6 421 aa6.05□□□□□ -1.44
SCFD1-209ENST00000553280 MYCT1Q8N699 235 aa6.05□□□□□ -1.44
SCFD1-209ENST00000553280 ZNF566Q969W8 418 aa6.05□□□□□ -1.44
SCFD1-209ENST00000553280 CEP95Q96GE4 821 aa6.05□□□□□ -1.44
SCFD1-209ENST00000553280 RPL10LQ96L21 214 aaKnown RBP6.05□□□□□ -1.44
SCFD1-209ENST00000553280 MYOCQ99972 504 aa6.05□□□□□ -1.44
SCFD1-209ENST00000553280 MRI1Q9BV20 369 aa6.05□□□□□ -1.44
SCFD1-209ENST00000553280 ZNF518BQ9C0D4 1074 aa6.05□□□□□ -1.44
SCFD1-209ENST00000553280 BRD9Q9H8M2 597 aa6.05□□□□□ -1.44
SCFD1-209ENST00000553280 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.05□□□□□ -1.44
SCFD1-209ENST00000553280 RLIMQ9NVW2 624 aa6.05□□□□□ -1.44
SCFD1-209ENST00000553280 CFAP97Q9P2B7 532 aa6.05□□□□□ -1.44
SCFD1-209ENST00000553280 ZNF69Q9UC07 566 aa6.05□□□□□ -1.44
SCFD1-209ENST00000553280 RGS17Q9UGC6 210 aaPredicted RBP6.05□□□□□ -1.44
SCFD1-209ENST00000553280 PAXBP1Q9Y5B6 917 aa6.05□□□□□ -1.44
SCFD1-209ENST00000553280 PMS2P1A4D2B8 440 aa6.04□□□□□ -1.44
SCFD1-209ENST00000553280 GOLGA6L3A6NEY3 463 aa6.04□□□□□ -1.44
SCFD1-209ENST00000553280 C9orf118A6NHY6 69 aa6.04□□□□□ -1.44
SCFD1-209ENST00000553280 HNRNPDLO14979 420 aaKnown RBP6.04□□□□□ -1.44
SCFD1-209ENST00000553280 AREL1O15033 823 aa6.04□□□□□ -1.44
SCFD1-209ENST00000553280 MT-ND5P03915 603 aa6.04□□□□□ -1.44
SCFD1-209ENST00000553280 ANXA2P07355 339 aaKnown RBP6.04□□□□□ -1.44
SCFD1-209ENST00000553280 GJB1P08034 283 aa6.04□□□□□ -1.44
SCFD1-209ENST00000553280 RAP2AP10114 183 aa6.04□□□□□ -1.44
SCFD1-209ENST00000553280 ALDH9A1P49189 494 aa6.04□□□□□ -1.44
SCFD1-209ENST00000553280 NOMO3P69849 1222 aa6.04□□□□□ -1.44
SCFD1-209ENST00000553280 CTBP1Q13363 440 aa6.04□□□□□ -1.44
SCFD1-209ENST00000553280 MRPL49Q13405 166 aaKnown RBP6.04□□□□□ -1.44
SCFD1-209ENST00000553280 NFYCQ13952 458 aa6.04□□□□□ -1.44
SCFD1-209ENST00000553280 SLC44A4Q53GD3 710 aa6.04□□□□□ -1.44
SCFD1-209ENST00000553280 LCE5AQ5TCM9 118 aa6.04□□□□□ -1.44
SCFD1-209ENST00000553280 MCTP2Q6DN12 878 aa6.04□□□□□ -1.44
SCFD1-209ENST00000553280 CATSPERGQ6ZRH7 1159 aa6.04□□□□□ -1.44
SCFD1-209ENST00000553280 MICU3Q86XE3 530 aa6.04□□□□□ -1.44
SCFD1-209ENST00000553280 PDSS2Q86YH6 399 aa6.04□□□□□ -1.44
SCFD1-209ENST00000553280 TXLNBQ8N3L3 684 aa6.04□□□□□ -1.44
SCFD1-209ENST00000553280 SDR16C5Q8N3Y7 309 aa6.04□□□□□ -1.44
SCFD1-209ENST00000553280 PAF1Q8N7H5 531 aa6.04□□□□□ -1.44
SCFD1-209ENST00000553280 OR14K1Q8NGZ2 314 aa6.04□□□□□ -1.44
SCFD1-209ENST00000553280 IQCDQ96DY2 449 aa6.04□□□□□ -1.44
SCFD1-209ENST00000553280 SNX22Q96L94 193 aa6.04□□□□□ -1.44
SCFD1-209ENST00000553280 GPHA2Q96T91 129 aa6.04□□□□□ -1.44
SCFD1-209ENST00000553280 NDC1Q9BTX1 674 aa6.04□□□□□ -1.44
SCFD1-209ENST00000553280 STK33Q9BYT3 514 aa6.04□□□□□ -1.44
SCFD1-209ENST00000553280 GJB4Q9NTQ9 266 aa6.04□□□□□ -1.44
SCFD1-209ENST00000553280 SRRDQ9UH36 339 aa6.04□□□□□ -1.44
SCFD1-209ENST00000553280 PGAP2Q9UHJ9 254 aa6.04□□□□□ -1.44
SCFD1-209ENST00000553280 LZTS1Q9Y250 596 aa6.04□□□□□ -1.44
SCFD1-209ENST00000553280 ARHGAP6O43182 974 aa6.03□□□□□ -1.44
SCFD1-209ENST00000553280 THAP12O43422 761 aa6.03□□□□□ -1.44
SCFD1-209ENST00000553280 SKAP2O75563 359 aaPredicted RBP6.03□□□□□ -1.44
SCFD1-209ENST00000553280 RARBP10826 455 aa6.03□□□□□ -1.44
SCFD1-209ENST00000553280 ATP5JP18859 108 aa6.03□□□□□ -1.44
SCFD1-209ENST00000553280 PDIA3P30101 505 aaKnown RBP6.03□□□□□ -1.44
SCFD1-209ENST00000553280 PHKA1P46020 1223 aa6.03□□□□□ -1.44
SCFD1-209ENST00000553280 RAB32Q13637 225 aa6.03□□□□□ -1.44
SCFD1-209ENST00000553280 CCDC70Q6NSX1 233 aa6.03□□□□□ -1.44
SCFD1-209ENST00000553280 GGT6Q6P531 493 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms