RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 DPYDQ12882 1025 aa20.88■□□□□ 0.93
PTCH1-227ENST00000553256 KMT5BQ4FZB7 885 aa20.88■□□□□ 0.93
PTCH1-227ENST00000553256 KRBA2Q6ZNG9 492 aa20.88■□□□□ 0.93
PTCH1-227ENST00000553256 STXBP4Q6ZWJ1 553 aa20.88■□□□□ 0.93
PTCH1-227ENST00000553256 RTL10Q7L3V2 364 aa20.88■□□□□ 0.93
PTCH1-227ENST00000553256 CBWD2Q8IUF1 395 aa20.88■□□□□ 0.93
PTCH1-227ENST00000553256 GPD1LQ8N335 351 aa20.88■□□□□ 0.93
PTCH1-227ENST00000553256 C1orf127Q8N9H9 656 aa20.88■□□□□ 0.93
PTCH1-227ENST00000553256 FSIP1Q8NA03 581 aa20.88■□□□□ 0.93
PTCH1-227ENST00000553256 ENGASEQ8NFI3 743 aa20.88■□□□□ 0.93
PTCH1-227ENST00000553256 FAM212AQ96EL1 285 aa20.88■□□□□ 0.93
PTCH1-227ENST00000553256 DPP3Q9NY33 737 aa20.88■□□□□ 0.93
PTCH1-227ENST00000553256 RBAKQ9NYW8 714 aaPredicted RBP20.88■□□□□ 0.93
PTCH1-227ENST00000553256 HSPBP1Q9NZL4 362 aa20.88■□□□□ 0.93
PTCH1-227ENST00000553256 TSC2P49815 1807 aa20.88■□□□□ 0.93
PTCH1-227ENST00000553256 DOCK6Q96HP0 2047 aa20.87■□□□□ 0.93
PTCH1-227ENST00000553256 NOTCH4Q99466 2003 aa20.87■□□□□ 0.93
PTCH1-227ENST00000553256 ARHGEF37A1IGU5 675 aa20.87■□□□□ 0.93
PTCH1-227ENST00000553256 CYP11A1P05108 521 aa20.87■□□□□ 0.93
PTCH1-227ENST00000553256 C8AP07357 584 aa20.87■□□□□ 0.93
PTCH1-227ENST00000553256 HNRNPA1P09651 372 aaKnown RBP eCLIP20.87■□□□□ 0.93
PTCH1-227ENST00000553256 ALADP13716 330 aa20.87■□□□□ 0.93
PTCH1-227ENST00000553256 SNW1Q13573 536 aaKnown RBP20.87■□□□□ 0.93
PTCH1-227ENST00000553256 UVSSAQ2YD98 709 aa20.87■□□□□ 0.93
PTCH1-227ENST00000553256 ARMCX5Q6P1M9 558 aa20.87■□□□□ 0.93
PTCH1-227ENST00000553256 FMR1NBQ8N0W7 255 aaPredicted RBP20.87■□□□□ 0.93
PTCH1-227ENST00000553256 APPL2Q8NEU8 664 aa20.87■□□□□ 0.93
PTCH1-227ENST00000553256 SENP8Q96LD8 212 aa20.87■□□□□ 0.93
PTCH1-227ENST00000553256 RTP3Q9BQQ7 232 aa20.87■□□□□ 0.93
PTCH1-227ENST00000553256 C1QTNF1Q9BXJ1 281 aa20.87■□□□□ 0.93
PTCH1-227ENST00000553256 KCTD10Q9H3F6 313 aa20.87■□□□□ 0.93
PTCH1-227ENST00000553256 PDE11AQ9HCR9 933 aa20.87■□□□□ 0.93
PTCH1-227ENST00000553256 SIX4Q9UIU6 781 aa20.87■□□□□ 0.93
PTCH1-227ENST00000553256 TIMM13Q9Y5L4 95 aaPredicted RBP20.87■□□□□ 0.93
PTCH1-227ENST00000553256 DOCK8Q8NF50 2099 aa20.87■□□□□ 0.93
PTCH1-227ENST00000553256 H7C4K7 107 aa20.86■□□□□ 0.93
PTCH1-227ENST00000553256 ZNF202O95125 648 aa20.86■□□□□ 0.93
PTCH1-227ENST00000553256 SEC24AO95486 1093 aa20.86■□□□□ 0.93
PTCH1-227ENST00000553256 ATF2P15336 505 aa20.86■□□□□ 0.93
PTCH1-227ENST00000553256 TCEAL8Q8IYN2 117 aa20.86■□□□□ 0.93
PTCH1-227ENST00000553256 SMG7Q92540 1137 aaKnown RBP20.86■□□□□ 0.93
PTCH1-227ENST00000553256 DMAC2Q9NW81 257 aa20.86■□□□□ 0.93
PTCH1-227ENST00000553256 NR2E1Q9Y466 385 aa20.86■□□□□ 0.93
PTCH1-227ENST00000553256 CLUHO75153 1309 aa20.85■□□□□ 0.93
PTCH1-227ENST00000553256 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.85■□□□□ 0.93
PTCH1-227ENST00000553256 RHOBTB3O94955 611 aa20.85■□□□□ 0.93
PTCH1-227ENST00000553256 SP100P23497 879 aaPredicted RBP20.85■□□□□ 0.93
PTCH1-227ENST00000553256 PSMD2Q13200 908 aa20.85■□□□□ 0.93
PTCH1-227ENST00000553256 KNOP1Q1ED39 458 aaKnown RBP20.85■□□□□ 0.93
PTCH1-227ENST00000553256 CTXN3Q4LDR2 81 aa20.85■□□□□ 0.93
PTCH1-227ENST00000553256 ZNF280DQ6N043 979 aa20.85■□□□□ 0.93
PTCH1-227ENST00000553256 ELMSAN1Q6PJG2 1045 aa20.85■□□□□ 0.93
PTCH1-227ENST00000553256 POTEHQ6S545 545 aa20.85■□□□□ 0.93
PTCH1-227ENST00000553256 CCDC149Q6ZUS6 474 aa20.85■□□□□ 0.93
PTCH1-227ENST00000553256 LIMS2Q7Z4I7 341 aa20.85■□□□□ 0.93
PTCH1-227ENST00000553256 NELFCDQ8IXH7 590 aa20.85■□□□□ 0.93
PTCH1-227ENST00000553256 SLC7A14Q8TBB6 771 aa20.85■□□□□ 0.93
PTCH1-227ENST00000553256 EDAQ92838 391 aa20.85■□□□□ 0.93
PTCH1-227ENST00000553256 LRFN3Q9BTN0 628 aa20.85■□□□□ 0.93
PTCH1-227ENST00000553256 YWHAHQ04917 246 aaPredicted RBP20.84■□□□□ 0.93
PTCH1-227ENST00000553256 PTPN21Q16825 1174 aa20.84■□□□□ 0.93
PTCH1-227ENST00000553256 TPGS2Q68CL5 300 aa20.84■□□□□ 0.93
PTCH1-227ENST00000553256 OR5B17Q8NGF7 314 aa20.84■□□□□ 0.93
PTCH1-227ENST00000553256 PLEKHO2Q8TD55 490 aa20.84■□□□□ 0.93
PTCH1-227ENST00000553256 MYADMQ96S97 322 aa20.84■□□□□ 0.93
PTCH1-227ENST00000553256 CRISPLD1Q9H336 500 aa20.84■□□□□ 0.93
PTCH1-227ENST00000553256 INTS13Q9NVM9 706 aa20.84■□□□□ 0.93
PTCH1-227ENST00000553256 EPS15L1Q9UBC2 864 aa20.84■□□□□ 0.93
PTCH1-227ENST00000553256 ZNF233A6NK53 670 aa20.83■□□□□ 0.93
PTCH1-227ENST00000553256 CLIC2O15247 247 aa20.83■□□□□ 0.93
PTCH1-227ENST00000553256 RPN1P04843 607 aaKnown RBP20.83■□□□□ 0.93
PTCH1-227ENST00000553256 TAF6P49848 677 aa20.83■□□□□ 0.93
PTCH1-227ENST00000553256 ZXDAP98168 799 aa20.83■□□□□ 0.93
PTCH1-227ENST00000553256 LIN9Q5TKA1 542 aa20.83■□□□□ 0.93
PTCH1-227ENST00000553256 SLC9A9Q8IVB4 645 aa20.83■□□□□ 0.93
PTCH1-227ENST00000553256 OR10T2Q8NGX3 314 aa20.83■□□□□ 0.93
PTCH1-227ENST00000553256 MFSD14AQ96MC6 490 aa20.83■□□□□ 0.93
PTCH1-227ENST00000553256 OXCT2Q9BYC2 517 aaPredicted RBP20.83■□□□□ 0.93
PTCH1-227ENST00000553256 KIAA1586Q9HCI6 787 aa20.83■□□□□ 0.93
PTCH1-227ENST00000553256 CGNQ9P2M7 1197 aaKnown RBP20.83■□□□□ 0.93
PTCH1-227ENST00000553256 AFF4Q9UHB7 1163 aaKnown RBP20.83■□□□□ 0.93
PTCH1-227ENST00000553256 MAFFQ9ULX9 164 aa20.83■□□□□ 0.93
PTCH1-227ENST00000553256 FAM86C2PA6NEL3 165 aa20.82■□□□□ 0.92
PTCH1-227ENST00000553256 NTHL1P78549 312 aa20.82■□□□□ 0.92
PTCH1-227ENST00000553256 TFAMQ00059 246 aaKnown RBP20.82■□□□□ 0.92
PTCH1-227ENST00000553256 GPR17Q13304 367 aa20.82■□□□□ 0.92
PTCH1-227ENST00000553256 MYBPC2Q14324 1141 aa20.82■□□□□ 0.92
PTCH1-227ENST00000553256 KCNB1Q14721 858 aa20.82■□□□□ 0.92
PTCH1-227ENST00000553256 SNRNP35Q16560 246 aaKnown RBP20.82■□□□□ 0.92
PTCH1-227ENST00000553256 PPM1LQ5SGD2 360 aa20.82■□□□□ 0.92
PTCH1-227ENST00000553256 DSTYKQ6XUX3 929 aa20.82■□□□□ 0.92
PTCH1-227ENST00000553256 RNF19BQ6ZMZ0 732 aa20.82■□□□□ 0.92
PTCH1-227ENST00000553256 OTOP3Q7RTS5 596 aa20.82■□□□□ 0.92
PTCH1-227ENST00000553256 LRRC52Q8N7C0 313 aa20.82■□□□□ 0.92
PTCH1-227ENST00000553256 TDRD5Q8NAT2 981 aaKnown RBP20.82■□□□□ 0.92
PTCH1-227ENST00000553256 XXYLT1Q8NBI6 393 aa20.82■□□□□ 0.92
PTCH1-227ENST00000553256 SPATA20Q8TB22 786 aa20.82■□□□□ 0.92
PTCH1-227ENST00000553256 ASIC4Q96FT7 647 aa20.82■□□□□ 0.92
PTCH1-227ENST00000553256 TMEM209Q96SK2 561 aa20.82■□□□□ 0.92
PTCH1-227ENST00000553256 MTMR12Q9C0I1 747 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms