RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 MYL7Q01449 175 aa11.06□□□□□ -0.64
TRAFD1-208ENST00000552890 BFSP1Q12934 665 aa11.06□□□□□ -0.64
TRAFD1-208ENST00000552890 PLD1Q13393 1074 aa11.06□□□□□ -0.64
TRAFD1-208ENST00000552890 CAMK1Q14012 370 aa11.06□□□□□ -0.64
TRAFD1-208ENST00000552890 CCDC85BQ15834 202 aaPredicted RBP11.06□□□□□ -0.64
TRAFD1-208ENST00000552890 SGSM1Q2NKQ1 1148 aa11.06□□□□□ -0.64
TRAFD1-208ENST00000552890 LIN9Q5TKA1 542 aa11.06□□□□□ -0.64
TRAFD1-208ENST00000552890 CBWD2Q8IUF1 395 aa11.06□□□□□ -0.64
TRAFD1-208ENST00000552890 DCP1BQ8IZD4 617 aaKnown RBP11.06□□□□□ -0.64
TRAFD1-208ENST00000552890 TOP6BLQ8N6T0 577 aa11.06□□□□□ -0.64
TRAFD1-208ENST00000552890 RDH13Q8NBN7 331 aa11.06□□□□□ -0.64
TRAFD1-208ENST00000552890 GLIS3Q8NEA6 775 aa11.06□□□□□ -0.64
TRAFD1-208ENST00000552890 C18orf25Q96B23 403 aaPredicted RBP11.06□□□□□ -0.64
TRAFD1-208ENST00000552890 CCDC127Q96BQ5 260 aa11.06□□□□□ -0.64
TRAFD1-208ENST00000552890 FGFBP2Q9BYJ0 223 aa11.06□□□□□ -0.64
TRAFD1-208ENST00000552890 GPR62Q9BZJ7 368 aa11.06□□□□□ -0.64
TRAFD1-208ENST00000552890 SFXN1Q9H9B4 322 aa11.06□□□□□ -0.64
TRAFD1-208ENST00000552890 PDE11AQ9HCR9 933 aa11.06□□□□□ -0.64
TRAFD1-208ENST00000552890 ANO10Q9NW15 660 aa11.06□□□□□ -0.64
TRAFD1-208ENST00000552890 ZDHHC7Q9NXF8 308 aa11.06□□□□□ -0.64
TRAFD1-208ENST00000552890 MTRRQ9UBK8 725 aa11.06□□□□□ -0.64
TRAFD1-208ENST00000552890 RWDD2AQ9UIY3 292 aa11.06□□□□□ -0.64
TRAFD1-208ENST00000552890 AGAP1Q9UPQ3 857 aa11.06□□□□□ -0.64
TRAFD1-208ENST00000552890 MAPK8IP1Q9UQF2 711 aa11.06□□□□□ -0.64
TRAFD1-208ENST00000552890 SZT2Q5T011 3432 aa11.06□□□□□ -0.64
TRAFD1-208ENST00000552890 TISP43B9A030 160 aa11.05□□□□□ -0.64
TRAFD1-208ENST00000552890 CYB561D2O14569 222 aa11.05□□□□□ -0.64
TRAFD1-208ENST00000552890 P4HA2O15460 535 aa11.05□□□□□ -0.64
TRAFD1-208ENST00000552890 XYLBO75191 536 aa11.05□□□□□ -0.64
TRAFD1-208ENST00000552890 ITGB3P05106 788 aa11.05□□□□□ -0.64
TRAFD1-208ENST00000552890 CYP11A1P05108 521 aa11.05□□□□□ -0.64
TRAFD1-208ENST00000552890 POU2F2P09086 479 aa11.05□□□□□ -0.64
TRAFD1-208ENST00000552890 HNRNPA1P09651 372 aaKnown RBP eCLIP11.05□□□□□ -0.64
TRAFD1-208ENST00000552890 DNAJB1P25685 340 aa11.05□□□□□ -0.64
TRAFD1-208ENST00000552890 MTHFRP42898 656 aa11.05□□□□□ -0.64
TRAFD1-208ENST00000552890 MCCD1P59942 119 aaPredicted RBP11.05□□□□□ -0.64
TRAFD1-208ENST00000552890 TNNC1P63316 161 aa11.05□□□□□ -0.64
TRAFD1-208ENST00000552890 TSPY1Q01534 308 aa11.05□□□□□ -0.64
TRAFD1-208ENST00000552890 SOX4Q06945 474 aaPredicted RBP11.05□□□□□ -0.64
TRAFD1-208ENST00000552890 HYAL1Q12794 435 aa11.05□□□□□ -0.64
TRAFD1-208ENST00000552890 BIRC3Q13489 604 aa11.05□□□□□ -0.64
TRAFD1-208ENST00000552890 RAB33AQ14088 237 aa11.05□□□□□ -0.64
TRAFD1-208ENST00000552890 CAMK4Q16566 473 aa11.05□□□□□ -0.64
TRAFD1-208ENST00000552890 NFE2Q16621 373 aaPredicted RBP11.05□□□□□ -0.64
TRAFD1-208ENST00000552890 LEXMQ3ZCV2 418 aa11.05□□□□□ -0.64
TRAFD1-208ENST00000552890 ZCWPW2Q504Y3 356 aa11.05□□□□□ -0.64
TRAFD1-208ENST00000552890 WDR44Q5JSH3 913 aa11.05□□□□□ -0.64
TRAFD1-208ENST00000552890 VARS2Q5ST30 1063 aaKnown RBP11.05□□□□□ -0.64
TRAFD1-208ENST00000552890 ZBTB41Q5SVQ8 909 aa11.05□□□□□ -0.64
TRAFD1-208ENST00000552890 KRT39Q6A163 491 aa11.05□□□□□ -0.64
TRAFD1-208ENST00000552890 OVOS1Q6IE37 1185 aa11.05□□□□□ -0.64
TRAFD1-208ENST00000552890 SLC8B1Q6J4K2 584 aa11.05□□□□□ -0.64
TRAFD1-208ENST00000552890 C15orf39Q6ZRI6 1047 aa11.05□□□□□ -0.64
TRAFD1-208ENST00000552890 EP400NLQ6ZTU2 488 aa11.05□□□□□ -0.64
TRAFD1-208ENST00000552890 TRAPPC11Q7Z392 1133 aa11.05□□□□□ -0.64
TRAFD1-208ENST00000552890 TMEM173Q86WV6 379 aaPredicted RBP11.05□□□□□ -0.64
TRAFD1-208ENST00000552890 ELMOD1Q8N336 334 aa11.05□□□□□ -0.64
TRAFD1-208ENST00000552890 ANKRD20A12PQ8NF67 263 aa11.05□□□□□ -0.64
TRAFD1-208ENST00000552890 CMASQ8NFW8 434 aaPredicted RBP11.05□□□□□ -0.64
TRAFD1-208ENST00000552890 ZNF461Q8TAF7 563 aa11.05□□□□□ -0.64
TRAFD1-208ENST00000552890 NELFBQ8WX92 580 aa11.05□□□□□ -0.64
TRAFD1-208ENST00000552890 PPM1EQ8WY54 764 aa11.05□□□□□ -0.64
TRAFD1-208ENST00000552890 HPDLQ96IR7 371 aa11.05□□□□□ -0.64
TRAFD1-208ENST00000552890 SENP8Q96LD8 212 aa11.05□□□□□ -0.64
TRAFD1-208ENST00000552890 KLHL5Q96PQ7 755 aa11.05□□□□□ -0.64
TRAFD1-208ENST00000552890 IGFLR1Q9H665 355 aa11.05□□□□□ -0.64
TRAFD1-208ENST00000552890 VRTNQ9H8Y1 702 aa11.05□□□□□ -0.64
TRAFD1-208ENST00000552890 HCSTQ9UBK5 93 aa11.05□□□□□ -0.64
TRAFD1-208ENST00000552890 PRKAG3Q9UGI9 489 aa11.05□□□□□ -0.64
TRAFD1-208ENST00000552890 TUBGCP4Q9UGJ1 667 aa11.05□□□□□ -0.64
TRAFD1-208ENST00000552890 CD207Q9UJ71 328 aa11.05□□□□□ -0.64
TRAFD1-208ENST00000552890 KIAA1671Q9BY89 1806 aa11.05□□□□□ -0.64
TRAFD1-208ENST00000552890 CHD7Q9P2D1 2997 aa11.04□□□□□ -0.64
TRAFD1-208ENST00000552890 MYO7AQ13402 2215 aa11.04□□□□□ -0.64
TRAFD1-208ENST00000552890 C2CD2LO14523 706 aa11.04□□□□□ -0.64
TRAFD1-208ENST00000552890 PMM2O15305 246 aa11.04□□□□□ -0.64
TRAFD1-208ENST00000552890 TEX28O15482 410 aa11.04□□□□□ -0.64
TRAFD1-208ENST00000552890 CLASP2O75122 1294 aaKnown RBP11.04□□□□□ -0.64
TRAFD1-208ENST00000552890 CNPP09543 421 aaKnown RBP11.04□□□□□ -0.64
TRAFD1-208ENST00000552890 POLR2BP30876 1174 aaKnown RBP11.04□□□□□ -0.64
TRAFD1-208ENST00000552890 TUFMP49411 452 aaKnown RBP11.04□□□□□ -0.64
TRAFD1-208ENST00000552890 NLRP12P59046 1061 aa11.04□□□□□ -0.64
TRAFD1-208ENST00000552890 YWHAEP62258 255 aaKnown RBP11.04□□□□□ -0.64
TRAFD1-208ENST00000552890 SMAD4Q13485 552 aaKnown RBP11.04□□□□□ -0.64
TRAFD1-208ENST00000552890 CCDC40Q4G0X9 1142 aa11.04□□□□□ -0.64
TRAFD1-208ENST00000552890 CTXN3Q4LDR2 81 aa11.04□□□□□ -0.64
TRAFD1-208ENST00000552890 ATAT1Q5SQI0 421 aa11.04□□□□□ -0.64
TRAFD1-208ENST00000552890 SPRED2Q7Z698 418 aa11.04□□□□□ -0.64
TRAFD1-208ENST00000552890 RBM23Q86U06 439 aaKnown RBP11.04□□□□□ -0.64
TRAFD1-208ENST00000552890 ZC3H3Q8IXZ2 948 aaKnown RBP11.04□□□□□ -0.64
TRAFD1-208ENST00000552890 EFCAB13Q8IY85 973 aa11.04□□□□□ -0.64
TRAFD1-208ENST00000552890 C1orf127Q8N9H9 656 aa11.04□□□□□ -0.64
TRAFD1-208ENST00000552890 LEMD2Q8NC56 503 aa11.04□□□□□ -0.64
TRAFD1-208ENST00000552890 LNX1Q8TBB1 728 aaPredicted RBP11.04□□□□□ -0.64
TRAFD1-208ENST00000552890 CEP295NLQ96MC4 621 aa11.04□□□□□ -0.64
TRAFD1-208ENST00000552890 MTMR12Q9C0I1 747 aa11.04□□□□□ -0.64
TRAFD1-208ENST00000552890 GOLGA2P5Q9HBQ8 144 aa11.04□□□□□ -0.64
TRAFD1-208ENST00000552890 TMEM8AQ9HCN3 771 aa11.04□□□□□ -0.64
TRAFD1-208ENST00000552890 EHD2Q9NZN4 543 aa11.04□□□□□ -0.64
TRAFD1-208ENST00000552890 MAGEC2Q9UBF1 373 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms