RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 NOP14P78316 857 aaKnown RBP10.52□□□□□ -0.73
TMEM116-216ENST00000552800 IGBP1P78318 339 aa10.52□□□□□ -0.73
TMEM116-216ENST00000552800 GPC5P78333 572 aa10.52□□□□□ -0.73
TMEM116-216ENST00000552800 CAP1Q01518 475 aa10.52□□□□□ -0.73
TMEM116-216ENST00000552800 CENPCQ03188 943 aa10.52□□□□□ -0.73
TMEM116-216ENST00000552800 ARID5AQ03989 594 aa10.52□□□□□ -0.73
TMEM116-216ENST00000552800 SNX17Q15036 470 aa10.52□□□□□ -0.73
TMEM116-216ENST00000552800 ARHGEF6Q15052 776 aa10.52□□□□□ -0.73
TMEM116-216ENST00000552800 ARHGAP44Q17R89 818 aa10.52□□□□□ -0.73
TMEM116-216ENST00000552800 SERINC5Q86VE9 423 aa10.52□□□□□ -0.73
TMEM116-216ENST00000552800 SLC47A2Q86VL8 602 aa10.52□□□□□ -0.73
TMEM116-216ENST00000552800 GLYCTKQ8IVS8 523 aa10.52□□□□□ -0.73
TMEM116-216ENST00000552800 EFCAB13Q8IY85 973 aa10.52□□□□□ -0.73
TMEM116-216ENST00000552800 GPR161Q8N6U8 529 aaKnown RBP10.52□□□□□ -0.73
TMEM116-216ENST00000552800 PCSK9Q8NBP7 692 aaKnown RBP10.52□□□□□ -0.73
TMEM116-216ENST00000552800 HES6Q96HZ4 224 aa10.52□□□□□ -0.73
TMEM116-216ENST00000552800 ANKRD36BP1Q96IX9 119 aa10.52□□□□□ -0.73
TMEM116-216ENST00000552800 RPS6KC1Q96S38 1066 aa10.52□□□□□ -0.73
TMEM116-216ENST00000552800 PCDHB18PQ96TA0 734 aa10.52□□□□□ -0.73
TMEM116-216ENST00000552800 BEGAINQ9BUH8 593 aa10.52□□□□□ -0.73
TMEM116-216ENST00000552800 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.52□□□□□ -0.73
TMEM116-216ENST00000552800 LHX5Q9H2C1 402 aa10.52□□□□□ -0.73
TMEM116-216ENST00000552800 RNF186Q9NXI6 227 aa10.52□□□□□ -0.73
TMEM116-216ENST00000552800 CNTN3Q9P232 1028 aa10.52□□□□□ -0.73
TMEM116-216ENST00000552800 UVRAGQ9P2Y5 699 aa10.52□□□□□ -0.73
TMEM116-216ENST00000552800 HDAC6Q9UBN7 1215 aa10.52□□□□□ -0.73
TMEM116-216ENST00000552800 SIX4Q9UIU6 781 aa10.52□□□□□ -0.73
TMEM116-216ENST00000552800 GTF3C4Q9UKN8 822 aa10.52□□□□□ -0.73
TMEM116-216ENST00000552800 ITGA11Q9UKX5 1188 aa10.52□□□□□ -0.73
TMEM116-216ENST00000552800 KIAA1257Q9ULG3 409 aa10.52□□□□□ -0.73
TMEM116-216ENST00000552800 TFR2Q9UP52 801 aa10.52□□□□□ -0.73
TMEM116-216ENST00000552800 PDCD11Q14690 1871 aaKnown RBP10.51□□□□□ -0.73
TMEM116-216ENST00000552800 GRID2IPA4D2P6 1211 aa10.51□□□□□ -0.73
TMEM116-216ENST00000552800 TNNC2P02585 160 aa10.51□□□□□ -0.73
TMEM116-216ENST00000552800 FTLP02792 175 aaPredicted RBP10.51□□□□□ -0.73
TMEM116-216ENST00000552800 ATP1A1P05023 1023 aaKnown RBP10.51□□□□□ -0.73
TMEM116-216ENST00000552800 PAEPP09466 180 aa10.51□□□□□ -0.73
TMEM116-216ENST00000552800 GSCP56915 257 aaPredicted RBP10.51□□□□□ -0.73
TMEM116-216ENST00000552800 YWHAEP62258 255 aaKnown RBP10.51□□□□□ -0.73
TMEM116-216ENST00000552800 PRKCZQ05513 592 aa10.51□□□□□ -0.73
TMEM116-216ENST00000552800 MGAT3Q09327 533 aa10.51□□□□□ -0.73
TMEM116-216ENST00000552800 INCA1Q0VD86 236 aa10.51□□□□□ -0.73
TMEM116-216ENST00000552800 CLEC16AQ2KHT3 1053 aa10.51□□□□□ -0.73
TMEM116-216ENST00000552800 GNASQ5JWF2 1037 aa10.51□□□□□ -0.73
TMEM116-216ENST00000552800 MTERF4Q7Z6M4 381 aaKnown RBP10.51□□□□□ -0.73
TMEM116-216ENST00000552800 PHF13Q86YI8 300 aaPredicted RBP10.51□□□□□ -0.73
TMEM116-216ENST00000552800 RASGEF1CQ8N431 466 aa10.51□□□□□ -0.73
TMEM116-216ENST00000552800 LRRC52Q8N7C0 313 aa10.51□□□□□ -0.73
TMEM116-216ENST00000552800 C7orf31Q8N865 590 aa10.51□□□□□ -0.73
TMEM116-216ENST00000552800 C1orf127Q8N9H9 656 aa10.51□□□□□ -0.73
TMEM116-216ENST00000552800 MSANTD4Q8NCY6 345 aa10.51□□□□□ -0.73
TMEM116-216ENST00000552800 MNS1Q8NEH6 495 aa10.51□□□□□ -0.73
TMEM116-216ENST00000552800 SLC35G2Q8TBE7 412 aa10.51□□□□□ -0.73
TMEM116-216ENST00000552800 RUBCNQ92622 972 aa10.51□□□□□ -0.73
TMEM116-216ENST00000552800 ZBTB10Q96DT7 871 aa10.51□□□□□ -0.73
TMEM116-216ENST00000552800 PACSIN1Q9BY11 444 aa10.51□□□□□ -0.73
TMEM116-216ENST00000552800 CELF4Q9BZC1 486 aaKnown RBP10.51□□□□□ -0.73
TMEM116-216ENST00000552800 IMPG2Q9BZV3 1241 aa10.51□□□□□ -0.73
TMEM116-216ENST00000552800 ARHGAP39Q9C0H5 1083 aa10.51□□□□□ -0.73
TMEM116-216ENST00000552800 NIF3L1Q9GZT8 377 aa10.51□□□□□ -0.73
TMEM116-216ENST00000552800 LCMT1Q9UIC8 334 aa10.51□□□□□ -0.73
TMEM116-216ENST00000552800 TMEM59LQ9UK28 342 aa10.51□□□□□ -0.73
TMEM116-216ENST00000552800 RAB21Q9UL25 225 aa10.51□□□□□ -0.73
TMEM116-216ENST00000552800 HYOU1Q9Y4L1 999 aa10.51□□□□□ -0.73
TMEM116-216ENST00000552800 TRIP11Q15643 1979 aa10.5□□□□□ -0.73
TMEM116-216ENST00000552800 A0A0U1RQG5 324 aaPredicted RBP10.5□□□□□ -0.73
TMEM116-216ENST00000552800 MACROD2A1Z1Q3 448 aa10.5□□□□□ -0.73
TMEM116-216ENST00000552800 ZNF623O75123 536 aa10.5□□□□□ -0.73
TMEM116-216ENST00000552800 ERLIN2O94905 339 aa10.5□□□□□ -0.73
TMEM116-216ENST00000552800 MOCS3O95396 460 aa10.5□□□□□ -0.73
TMEM116-216ENST00000552800 LSM8O95777 96 aaKnown RBP10.5□□□□□ -0.73
TMEM116-216ENST00000552800 HMGCRP04035 888 aa10.5□□□□□ -0.73
TMEM116-216ENST00000552800 PNMA6AP0CW24 399 aaPredicted RBP10.5□□□□□ -0.73
TMEM116-216ENST00000552800 H2AFXP16104 143 aaPredicted RBP10.5□□□□□ -0.73
TMEM116-216ENST00000552800 PAX3P23760 479 aa10.5□□□□□ -0.73
TMEM116-216ENST00000552800 PIK3CAP42336 1068 aa10.5□□□□□ -0.73
TMEM116-216ENST00000552800 MATR3P43243 847 aaKnown RBP eCLIP10.5□□□□□ -0.731e-8■□□□□ 9.6
TMEM116-216ENST00000552800 GCGRP47871 477 aa10.5□□□□□ -0.73
TMEM116-216ENST00000552800 PDE6CP51160 858 aa10.5□□□□□ -0.73
TMEM116-216ENST00000552800 MYL6P60660 151 aa10.5□□□□□ -0.73
TMEM116-216ENST00000552800 PTP4A2Q12974 167 aa10.5□□□□□ -0.73
TMEM116-216ENST00000552800 UBXN11Q5T124 520 aa10.5□□□□□ -0.73
TMEM116-216ENST00000552800 C11orf63Q6NUN7 778 aa10.5□□□□□ -0.73
TMEM116-216ENST00000552800 RUFY4Q6ZNE9 571 aa10.5□□□□□ -0.73
TMEM116-216ENST00000552800 MRPL10Q7Z7H8 261 aaKnown RBP10.5□□□□□ -0.73
TMEM116-216ENST00000552800 ZBTB33Q86T24 672 aa10.5□□□□□ -0.73
TMEM116-216ENST00000552800 NT5DC3Q86UY8 548 aa10.5□□□□□ -0.73
TMEM116-216ENST00000552800 PALB2Q86YC2 1186 aa10.5□□□□□ -0.73
TMEM116-216ENST00000552800 TMEM192Q8IY95 271 aa10.5□□□□□ -0.73
TMEM116-216ENST00000552800 THNSL1Q8IYQ7 743 aa10.5□□□□□ -0.73
TMEM116-216ENST00000552800 RPUSD2Q8IZ73 545 aaKnown RBP10.5□□□□□ -0.73
TMEM116-216ENST00000552800 MMGT1Q8N4V1 131 aa10.5□□□□□ -0.73
TMEM116-216ENST00000552800 CEP120Q8N960 986 aa10.5□□□□□ -0.73
TMEM116-216ENST00000552800 USP38Q8NB14 1042 aa10.5□□□□□ -0.73
TMEM116-216ENST00000552800 ACTRT1Q8TDG2 376 aa10.5□□□□□ -0.73
TMEM116-216ENST00000552800 U2AF1L4Q8WU68 220 aaKnown RBP10.5□□□□□ -0.73
TMEM116-216ENST00000552800 SLC20A1Q8WUM9 679 aa10.5□□□□□ -0.73
TMEM116-216ENST00000552800 HNRNPLLQ8WVV9 542 aaKnown RBP10.5□□□□□ -0.73
TMEM116-216ENST00000552800 DNAJB3Q8WWF6 145 aa10.5□□□□□ -0.73
TMEM116-216ENST00000552800 ZNF606Q8WXB4 792 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms