RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 C3orf58Q8NDZ4 430 aa10.73□□□□□ -0.69
LETMD1-234ENST00000552645 POP1Q99575 1024 aaKnown RBP10.73□□□□□ -0.69
LETMD1-234ENST00000552645 VN1R3Q9BXE9 311 aa10.73□□□□□ -0.69
LETMD1-234ENST00000552645 GPR62Q9BZJ7 368 aa10.73□□□□□ -0.69
LETMD1-234ENST00000552645 MTMR12Q9C0I1 747 aa10.73□□□□□ -0.69
LETMD1-234ENST00000552645 IGFLR1Q9H665 355 aa10.73□□□□□ -0.69
LETMD1-234ENST00000552645 DPP3Q9NY33 737 aa10.73□□□□□ -0.69
LETMD1-234ENST00000552645 LZTS1Q9Y250 596 aa10.73□□□□□ -0.69
LETMD1-234ENST00000552645 VWA8A3KMH1 1905 aa10.73□□□□□ -0.69
LETMD1-234ENST00000552645 SF3B1O75533 1304 aaKnown RBP eCLIP10.73□□□□□ -0.692e-7■■■■■ 99.9
LETMD1-234ENST00000552645 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.73□□□□□ -0.69
LETMD1-234ENST00000552645 PPP1R3GB7ZBB8 358 aa10.73□□□□□ -0.69
LETMD1-234ENST00000552645 MYO1CO00159 1063 aa10.73□□□□□ -0.69
LETMD1-234ENST00000552645 CXCL14O95715 111 aa10.73□□□□□ -0.69
LETMD1-234ENST00000552645 TNNC2P02585 160 aa10.73□□□□□ -0.69
LETMD1-234ENST00000552645 TPM1P09493 284 aa10.73□□□□□ -0.69
LETMD1-234ENST00000552645 RPL9P32969 192 aaKnown RBP10.73□□□□□ -0.69
LETMD1-234ENST00000552645 BRCC3P46736 316 aa10.73□□□□□ -0.69
LETMD1-234ENST00000552645 ZBTB6Q15916 424 aa10.73□□□□□ -0.69
LETMD1-234ENST00000552645 FAM171A1Q5VUB5 890 aa10.73□□□□□ -0.69
LETMD1-234ENST00000552645 SPATA1Q5VX52 437 aa10.73□□□□□ -0.69
LETMD1-234ENST00000552645 CENPPQ6IPU0 288 aa10.73□□□□□ -0.69
LETMD1-234ENST00000552645 DCLRE1AQ6PJP8 1040 aa10.73□□□□□ -0.69
LETMD1-234ENST00000552645 LUZP1Q86V48 1076 aa10.73□□□□□ -0.69
LETMD1-234ENST00000552645 SLC9A9Q8IVB4 645 aa10.73□□□□□ -0.69
LETMD1-234ENST00000552645 FAM186BQ8IYM0 893 aa10.73□□□□□ -0.69
LETMD1-234ENST00000552645 CCAR2Q8N163 923 aaKnown RBP10.73□□□□□ -0.69
LETMD1-234ENST00000552645 MAFAQ8NHW3 353 aaPredicted RBP10.73□□□□□ -0.69
LETMD1-234ENST00000552645 DHTKD1Q96HY7 919 aaPredicted RBP10.73□□□□□ -0.69
LETMD1-234ENST00000552645 ANKRD36BP1Q96IX9 119 aa10.73□□□□□ -0.69
LETMD1-234ENST00000552645 FBXL18Q96ME1 805 aa10.73□□□□□ -0.69
LETMD1-234ENST00000552645 LMAN2LQ9H0V9 348 aa10.73□□□□□ -0.69
LETMD1-234ENST00000552645 DMAC2Q9NW81 257 aa10.73□□□□□ -0.69
LETMD1-234ENST00000552645 DERAQ9Y315 318 aa10.73□□□□□ -0.69
LETMD1-234ENST00000552645 C2CD2Q9Y426 696 aa10.73□□□□□ -0.69
LETMD1-234ENST00000552645 PTPRJQ12913 1337 aa10.72□□□□□ -0.69
LETMD1-234ENST00000552645 HIDE1A8MVS5 230 aa10.72□□□□□ -0.69
LETMD1-234ENST00000552645 PPEF2O14830 753 aa10.72□□□□□ -0.69
LETMD1-234ENST00000552645 CLGNO14967 610 aa10.72□□□□□ -0.69
LETMD1-234ENST00000552645 PER2O15055 1255 aa10.72□□□□□ -0.69
LETMD1-234ENST00000552645 CETN3O15182 167 aa10.72□□□□□ -0.69
LETMD1-234ENST00000552645 TRAPPC3O43617 180 aa10.72□□□□□ -0.69
LETMD1-234ENST00000552645 AKAP3O75969 853 aa10.72□□□□□ -0.69
LETMD1-234ENST00000552645 ITGB3P05106 788 aa10.72□□□□□ -0.69
LETMD1-234ENST00000552645 URODP06132 367 aa10.72□□□□□ -0.69
LETMD1-234ENST00000552645 KRT13P13646 458 aa10.72□□□□□ -0.69
LETMD1-234ENST00000552645 CCNE1P24864 410 aa10.72□□□□□ -0.69
LETMD1-234ENST00000552645 PPP1R2P41236 205 aa10.72□□□□□ -0.69
LETMD1-234ENST00000552645 CCZ1BP86790 482 aa10.72□□□□□ -0.69
LETMD1-234ENST00000552645 CCZ1P86791 482 aaPredicted RBP10.72□□□□□ -0.69
LETMD1-234ENST00000552645 POU5F1Q01860 360 aaKnown RBP10.72□□□□□ -0.69
LETMD1-234ENST00000552645 PAK1Q13153 545 aa10.72□□□□□ -0.69
LETMD1-234ENST00000552645 SMC1AQ14683 1233 aaKnown RBP10.72□□□□□ -0.69
LETMD1-234ENST00000552645 PSMD6Q15008 389 aa10.72□□□□□ -0.69
LETMD1-234ENST00000552645 SURF1Q15526 300 aa10.72□□□□□ -0.69
LETMD1-234ENST00000552645 DUOXA2Q1HG44 320 aa10.72□□□□□ -0.69
LETMD1-234ENST00000552645 EDRF1Q3B7T1 1238 aa10.72□□□□□ -0.69
LETMD1-234ENST00000552645 DPCR1Q3MIW9 517 aa10.72□□□□□ -0.69
LETMD1-234ENST00000552645 ANO6Q4KMQ2 910 aa10.72□□□□□ -0.69
LETMD1-234ENST00000552645 ZCWPW2Q504Y3 356 aa10.72□□□□□ -0.69
LETMD1-234ENST00000552645 TIGD5Q53EQ6 642 aa10.72□□□□□ -0.69
LETMD1-234ENST00000552645 COBLL1Q53SF7 1204 aa10.72□□□□□ -0.69
LETMD1-234ENST00000552645 TCEAL5Q5H9L2 206 aa10.72□□□□□ -0.69
LETMD1-234ENST00000552645 C9orf57Q5W0N0 161 aa10.72□□□□□ -0.69
LETMD1-234ENST00000552645 SYT10Q6XYQ8 523 aa10.72□□□□□ -0.69
LETMD1-234ENST00000552645 GLYCTKQ8IVS8 523 aa10.72□□□□□ -0.69
LETMD1-234ENST00000552645 CSGALNACT2Q8N6G5 542 aa10.72□□□□□ -0.69
LETMD1-234ENST00000552645 OR5B17Q8NGF7 314 aa10.72□□□□□ -0.69
LETMD1-234ENST00000552645 SECISBP2LQ93073 1101 aaKnown RBP10.72□□□□□ -0.69
LETMD1-234ENST00000552645 TSPAN18Q96SJ8 248 aa10.72□□□□□ -0.69
LETMD1-234ENST00000552645 MYCBPQ99417 103 aaPredicted RBP10.72□□□□□ -0.69
LETMD1-234ENST00000552645 NCAPGQ9BPX3 1015 aa10.72□□□□□ -0.69
LETMD1-234ENST00000552645 SRRTQ9BXP5 876 aaKnown RBP10.72□□□□□ -0.69
LETMD1-234ENST00000552645 NSUN3Q9H649 340 aaKnown RBP10.72□□□□□ -0.69
LETMD1-234ENST00000552645 MMRN2Q9H8L6 949 aa10.72□□□□□ -0.69
LETMD1-234ENST00000552645 MRPL17Q9NRX2 175 aaKnown RBP10.72□□□□□ -0.69
LETMD1-234ENST00000552645 LMCD1Q9NZU5 365 aa10.72□□□□□ -0.69
LETMD1-234ENST00000552645 STXBP5LQ9Y2K9 1186 aa10.72□□□□□ -0.69
LETMD1-234ENST00000552645 BICDL2A1A5D9 508 aa10.71□□□□□ -0.69
LETMD1-234ENST00000552645 PHACTR2O75167 634 aa10.71□□□□□ -0.69
LETMD1-234ENST00000552645 SOD2P04179 222 aa10.71□□□□□ -0.69
LETMD1-234ENST00000552645 CTSAP10619 480 aa10.71□□□□□ -0.69
LETMD1-234ENST00000552645 EPB41P11171 864 aaKnown RBP10.71□□□□□ -0.69
LETMD1-234ENST00000552645 CYP3A5P20815 502 aa10.71□□□□□ -0.69
LETMD1-234ENST00000552645 POLR2BP30876 1174 aaKnown RBP10.71□□□□□ -0.69
LETMD1-234ENST00000552645 PSMC2P35998 433 aaKnown RBP10.71□□□□□ -0.69
LETMD1-234ENST00000552645 NRIP1P48552 1158 aa10.71□□□□□ -0.69
LETMD1-234ENST00000552645 GLUD2P49448 558 aa10.71□□□□□ -0.69
LETMD1-234ENST00000552645 PSEN1P49768 467 aa10.71□□□□□ -0.69
LETMD1-234ENST00000552645 GTF2A1P52655 376 aaPredicted RBP10.71□□□□□ -0.69
LETMD1-234ENST00000552645 GSDMDP57764 484 aa10.71□□□□□ -0.69
LETMD1-234ENST00000552645 FKBP3Q00688 224 aaKnown RBP10.71□□□□□ -0.69
LETMD1-234ENST00000552645 LRRC63Q05C16 580 aa10.71□□□□□ -0.69
LETMD1-234ENST00000552645 MYBPC2Q14324 1141 aa10.71□□□□□ -0.69
LETMD1-234ENST00000552645 ZSCAN26Q16670 478 aa10.71□□□□□ -0.69
LETMD1-234ENST00000552645 USP41Q3LFD5 358 aa10.71□□□□□ -0.69
LETMD1-234ENST00000552645 TMCO3Q6UWJ1 677 aa10.71□□□□□ -0.69
LETMD1-234ENST00000552645 DSTYKQ6XUX3 929 aa10.71□□□□□ -0.69
LETMD1-234ENST00000552645 ADGRD2Q7Z7M1 963 aa10.71□□□□□ -0.69
LETMD1-234ENST00000552645 SRLQ86TD4 932 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms