RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 NXF1Q9UBU9 619 aaKnown RBP13.58□□□□□ -0.24
CACNB3-223ENST00000552480 POLIQ9UNA4 740 aa13.58□□□□□ -0.24
CACNB3-223ENST00000552480 JRKLQ9Y4A0 524 aa13.58□□□□□ -0.24
CACNB3-223ENST00000552480 MRFAP1Q9Y605 127 aa13.58□□□□□ -0.24
CACNB3-223ENST00000552480 SMIM28A0A1B0GU29 152 aa13.57□□□□□ -0.24
CACNB3-223ENST00000552480 ARVCFO00192 962 aa13.57□□□□□ -0.24
CACNB3-223ENST00000552480 FTLP02792 175 aaPredicted RBP13.57□□□□□ -0.24
CACNB3-223ENST00000552480 GHRP10912 638 aa13.57□□□□□ -0.24
CACNB3-223ENST00000552480 CD58P19256 250 aa13.57□□□□□ -0.24
CACNB3-223ENST00000552480 CYP3A5P20815 502 aa13.57□□□□□ -0.24
CACNB3-223ENST00000552480 CD52P31358 61 aa13.57□□□□□ -0.24
CACNB3-223ENST00000552480 GTF2F1P35269 517 aaKnown RBP eCLIP13.57□□□□□ -0.24
CACNB3-223ENST00000552480 RAB27AP51159 221 aa13.57□□□□□ -0.24
CACNB3-223ENST00000552480 NAP1L1P55209 391 aaKnown RBP13.57□□□□□ -0.24
CACNB3-223ENST00000552480 AMPD2Q01433 879 aa13.57□□□□□ -0.24
CACNB3-223ENST00000552480 MYO1EQ12965 1108 aa13.57□□□□□ -0.24
CACNB3-223ENST00000552480 NFX1Q12986 1120 aaKnown RBP13.57□□□□□ -0.24
CACNB3-223ENST00000552480 LPIN1Q14693 890 aa13.57□□□□□ -0.24
CACNB3-223ENST00000552480 WDR72Q3MJ13 1102 aa13.57□□□□□ -0.24
CACNB3-223ENST00000552480 ZNF618Q5T7W0 954 aa13.57□□□□□ -0.24
CACNB3-223ENST00000552480 TRIM72Q6ZMU5 477 aa13.57□□□□□ -0.24
CACNB3-223ENST00000552480 DNAAF5Q86Y56 855 aa13.57□□□□□ -0.24
CACNB3-223ENST00000552480 TMEM130Q8N3G9 435 aa13.57□□□□□ -0.24
CACNB3-223ENST00000552480 LRRC52Q8N7C0 313 aa13.57□□□□□ -0.24
CACNB3-223ENST00000552480 RFFLQ8WZ73 363 aa13.57□□□□□ -0.24
CACNB3-223ENST00000552480 TRPV6Q9H1D0 765 aa13.57□□□□□ -0.24
CACNB3-223ENST00000552480 CXCL16Q9H2A7 254 aa13.57□□□□□ -0.24
CACNB3-223ENST00000552480 RNF39Q9H2S5 420 aa13.57□□□□□ -0.24
CACNB3-223ENST00000552480 AGO3Q9H9G7 860 aaKnown RBP13.57□□□□□ -0.24
CACNB3-223ENST00000552480 FAM105AQ9NUU6 356 aa13.57□□□□□ -0.24
CACNB3-223ENST00000552480 TUBGCP4Q9UGJ1 667 aa13.57□□□□□ -0.24
CACNB3-223ENST00000552480 PADI3Q9ULW8 664 aa13.57□□□□□ -0.24
CACNB3-223ENST00000552480 PCDHGC5Q9Y5F6 944 aa13.57□□□□□ -0.24
CACNB3-223ENST00000552480 UQCRHLA0A096LP55 91 aa13.56□□□□□ -0.24
CACNB3-223ENST00000552480 TLR3O15455 904 aaKnown RBP13.56□□□□□ -0.24
CACNB3-223ENST00000552480 THAP12O43422 761 aa13.56□□□□□ -0.24
CACNB3-223ENST00000552480 PALMO75781 387 aa13.56□□□□□ -0.24
CACNB3-223ENST00000552480 SLU7O95391 586 aaKnown RBP13.56□□□□□ -0.24
CACNB3-223ENST00000552480 CALCAP01258 141 aa13.56□□□□□ -0.24
CACNB3-223ENST00000552480 CD4P01730 458 aa13.56□□□□□ -0.24
CACNB3-223ENST00000552480 ATP1A1P05023 1023 aaKnown RBP13.56□□□□□ -0.24
CACNB3-223ENST00000552480 UQCRHP07919 91 aa13.56□□□□□ -0.24
CACNB3-223ENST00000552480 WEE2P0C1S8 567 aa13.56□□□□□ -0.24
CACNB3-223ENST00000552480 CKBP12277 381 aa13.56□□□□□ -0.24
CACNB3-223ENST00000552480 ITGA4P13612 1032 aa13.56□□□□□ -0.24
CACNB3-223ENST00000552480 ZSCAN20P17040 1043 aaPredicted RBP13.56□□□□□ -0.24
CACNB3-223ENST00000552480 TNNC1P63316 161 aa13.56□□□□□ -0.24
CACNB3-223ENST00000552480 DSC3Q14574 896 aa13.56□□□□□ -0.24
CACNB3-223ENST00000552480 TCEAL1Q15170 157 aa13.56□□□□□ -0.24
CACNB3-223ENST00000552480 PAPD7Q5XG87 772 aaKnown RBP13.56□□□□□ -0.24
CACNB3-223ENST00000552480 ACAD10Q6JQN1 1059 aa13.56□□□□□ -0.24
CACNB3-223ENST00000552480 PPP1R2P3Q6NXS1 205 aa13.56□□□□□ -0.24
CACNB3-223ENST00000552480 MRPL10Q7Z7H8 261 aaKnown RBP13.56□□□□□ -0.24
CACNB3-223ENST00000552480 RHOT2Q8IXI1 618 aa13.56□□□□□ -0.24
CACNB3-223ENST00000552480 TTC39CQ8N584 583 aa13.56□□□□□ -0.24
CACNB3-223ENST00000552480 C18orf25Q96B23 403 aaPredicted RBP13.56□□□□□ -0.24
CACNB3-223ENST00000552480 CALR3Q96L12 384 aaKnown RBP13.56□□□□□ -0.24
CACNB3-223ENST00000552480 TRAIPQ9BWF2 469 aa13.56□□□□□ -0.24
CACNB3-223ENST00000552480 THAP2Q9H0W7 228 aa13.56□□□□□ -0.24
CACNB3-223ENST00000552480 SMYD3Q9H7B4 428 aa13.56□□□□□ -0.24
CACNB3-223ENST00000552480 KLK14Q9P0G3 267 aa13.56□□□□□ -0.24
CACNB3-223ENST00000552480 CDC23Q9UJX2 597 aa13.56□□□□□ -0.24
CACNB3-223ENST00000552480 GRID2IPA4D2P6 1211 aa13.55□□□□□ -0.24
CACNB3-223ENST00000552480 CYP1A1P04798 512 aaPredicted RBP13.55□□□□□ -0.24
CACNB3-223ENST00000552480 PAEPP09466 180 aa13.55□□□□□ -0.24
CACNB3-223ENST00000552480 UNGP13051 313 aaPredicted RBP13.55□□□□□ -0.24
CACNB3-223ENST00000552480 CCL5P13501 91 aa13.55□□□□□ -0.24
CACNB3-223ENST00000552480 ATF7P17544 494 aaPredicted RBP13.55□□□□□ -0.24
CACNB3-223ENST00000552480 ABCB4P21439 1286 aa13.55□□□□□ -0.24
CACNB3-223ENST00000552480 NOP2P46087 812 aaKnown RBP13.55□□□□□ -0.24
CACNB3-223ENST00000552480 RAP1GAPP47736 663 aa13.55□□□□□ -0.24
CACNB3-223ENST00000552480 CDK7P50613 346 aa13.55□□□□□ -0.24
CACNB3-223ENST00000552480 GPC5P78333 572 aa13.55□□□□□ -0.24
CACNB3-223ENST00000552480 GLRA4Q5JXX5 417 aa13.55□□□□□ -0.24
CACNB3-223ENST00000552480 C9orf57Q5W0N0 161 aa13.55□□□□□ -0.24
CACNB3-223ENST00000552480 TRAF7Q6Q0C0 670 aa13.55□□□□□ -0.24
CACNB3-223ENST00000552480 TPCN2Q8NHX9 752 aa13.55□□□□□ -0.24
CACNB3-223ENST00000552480 CAGE1Q8TC20 777 aa13.55□□□□□ -0.24
CACNB3-223ENST00000552480 ARHGEF26Q96DR7 871 aa13.55□□□□□ -0.24
CACNB3-223ENST00000552480 ZNF560Q96MR9 790 aa13.55□□□□□ -0.24
CACNB3-223ENST00000552480 OSBPL7Q9BZF2 842 aa13.55□□□□□ -0.24
CACNB3-223ENST00000552480 SDCBP2Q9H190 292 aa13.55□□□□□ -0.24
CACNB3-223ENST00000552480 PDCL3Q9H2J4 239 aa13.55□□□□□ -0.24
CACNB3-223ENST00000552480 OGDHLQ9ULD0 1010 aa13.55□□□□□ -0.24
CACNB3-223ENST00000552480 GIT1Q9Y2X7 761 aa13.55□□□□□ -0.24
CACNB3-223ENST00000552480 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.55□□□□□ -0.24
CACNB3-223ENST00000552480 PIRO00625 290 aa13.54□□□□□ -0.24
CACNB3-223ENST00000552480 ENC1O14682 589 aa13.54□□□□□ -0.24
CACNB3-223ENST00000552480 PTGESO14684 152 aa13.54□□□□□ -0.24
CACNB3-223ENST00000552480 PPEF2O14830 753 aa13.54□□□□□ -0.24
CACNB3-223ENST00000552480 MGEA5O60502 916 aa13.54□□□□□ -0.24
CACNB3-223ENST00000552480 ZNF623O75123 536 aa13.54□□□□□ -0.24
CACNB3-223ENST00000552480 CILPO75339 1184 aa13.54□□□□□ -0.24
CACNB3-223ENST00000552480 CYP1A2P05177 515 aa13.54□□□□□ -0.24
CACNB3-223ENST00000552480 SKIP12755 728 aa13.54□□□□□ -0.24
CACNB3-223ENST00000552480 PNPLA4P41247 253 aa13.54□□□□□ -0.24
CACNB3-223ENST00000552480 HADHBP55084 474 aaKnown RBP13.54□□□□□ -0.24
CACNB3-223ENST00000552480 CENPCQ03188 943 aa13.54□□□□□ -0.24
CACNB3-223ENST00000552480 INCA1Q0VD86 236 aa13.54□□□□□ -0.24
CACNB3-223ENST00000552480 MTFR1Q15390 333 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 778.9 ms