RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 KIAA0100Q14667 2235 aaKnown RBP11.15□□□□□ -0.63
NEK3-203ENST00000551355 CCDC85CA6NKD9 419 aa11.14□□□□□ -0.63
NEK3-203ENST00000551355 TMEM189-UBE2V1I3L0A0 370 aa11.14□□□□□ -0.63
NEK3-203ENST00000551355 RNF225M0QZC1 329 aaPredicted RBP11.14□□□□□ -0.63
NEK3-203ENST00000551355 FOXN3O00409 490 aaPredicted RBP11.14□□□□□ -0.63
NEK3-203ENST00000551355 PODXLO00592 558 aa11.14□□□□□ -0.63
NEK3-203ENST00000551355 TRAPPC3O43617 180 aa11.14□□□□□ -0.63
NEK3-203ENST00000551355 IPO7O95373 1038 aaKnown RBP11.14□□□□□ -0.63
NEK3-203ENST00000551355 POMCP01189 267 aa11.14□□□□□ -0.63
NEK3-203ENST00000551355 FGFR1P11362 822 aa11.14□□□□□ -0.63
NEK3-203ENST00000551355 IBSPP21815 317 aaPredicted RBP11.14□□□□□ -0.63
NEK3-203ENST00000551355 ASPAP45381 313 aa11.14□□□□□ -0.63
NEK3-203ENST00000551355 LILRA4P59901 499 aa11.14□□□□□ -0.63
NEK3-203ENST00000551355 APBA1Q02410 837 aa11.14□□□□□ -0.63
NEK3-203ENST00000551355 PTK2Q05397 1052 aa11.14□□□□□ -0.63
NEK3-203ENST00000551355 SOX4Q06945 474 aaPredicted RBP11.14□□□□□ -0.63
NEK3-203ENST00000551355 DSC1Q08554 894 aa11.14□□□□□ -0.63
NEK3-203ENST00000551355 KLHL30Q0D2K2 578 aa11.14□□□□□ -0.63
NEK3-203ENST00000551355 UPP1Q16831 310 aa11.14□□□□□ -0.63
NEK3-203ENST00000551355 SPOPLQ6IQ16 392 aa11.14□□□□□ -0.63
NEK3-203ENST00000551355 GJB7Q6PEY0 223 aa11.14□□□□□ -0.63
NEK3-203ENST00000551355 LRRC43Q8N309 656 aa11.14□□□□□ -0.63
NEK3-203ENST00000551355 TOP6BLQ8N6T0 577 aa11.14□□□□□ -0.63
NEK3-203ENST00000551355 DPF3Q92784 378 aa11.14□□□□□ -0.63
NEK3-203ENST00000551355 BADQ92934 168 aa11.14□□□□□ -0.63
NEK3-203ENST00000551355 VWCEQ96DN2 955 aa11.14□□□□□ -0.63
NEK3-203ENST00000551355 CCDC42Q96M95 316 aa11.14□□□□□ -0.63
NEK3-203ENST00000551355 KREMEN1Q96MU8 473 aa11.14□□□□□ -0.63
NEK3-203ENST00000551355 CASD1Q96PB1 797 aa11.14□□□□□ -0.63
NEK3-203ENST00000551355 TMEM175Q9BSA9 504 aa11.14□□□□□ -0.63
NEK3-203ENST00000551355 CXCL16Q9H2A7 254 aa11.14□□□□□ -0.63
NEK3-203ENST00000551355 RNF19AQ9NV58 838 aa11.14□□□□□ -0.63
NEK3-203ENST00000551355 TBC1D13Q9NVG8 400 aa11.14□□□□□ -0.63
NEK3-203ENST00000551355 MIOSQ9NXC5 875 aa11.14□□□□□ -0.63
NEK3-203ENST00000551355 DSEQ9UL01 958 aa11.14□□□□□ -0.63
NEK3-203ENST00000551355 TANC1Q9C0D5 1861 aa11.14□□□□□ -0.63
NEK3-203ENST00000551355 HUS1O60921 280 aa11.13□□□□□ -0.63
NEK3-203ENST00000551355 LRRN2O75325 713 aa11.13□□□□□ -0.63
NEK3-203ENST00000551355 TACC1O75410 805 aa11.13□□□□□ -0.63
NEK3-203ENST00000551355 DGKIO75912 1065 aa11.13□□□□□ -0.63
NEK3-203ENST00000551355 ALDH2P05091 517 aa11.13□□□□□ -0.63
NEK3-203ENST00000551355 KRT5P13647 590 aa11.13□□□□□ -0.63
NEK3-203ENST00000551355 CYLC1P35663 651 aaPredicted RBP11.13□□□□□ -0.63
NEK3-203ENST00000551355 USP8P40818 1118 aa11.13□□□□□ -0.63
NEK3-203ENST00000551355 GUCY2FP51841 1108 aa11.13□□□□□ -0.63
NEK3-203ENST00000551355 WDR5P61964 334 aaKnown RBP11.13□□□□□ -0.63
NEK3-203ENST00000551355 TCTN1Q2MV58 587 aa11.13□□□□□ -0.63
NEK3-203ENST00000551355 WDR59Q6PJI9 974 aa11.13□□□□□ -0.63
NEK3-203ENST00000551355 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.13□□□□□ -0.63
NEK3-203ENST00000551355 IRF2BP2Q7Z5L9 587 aa11.13□□□□□ -0.63
NEK3-203ENST00000551355 UNC93AQ86WB7 457 aa11.13□□□□□ -0.63
NEK3-203ENST00000551355 ZNF677Q86XU0 584 aa11.13□□□□□ -0.63
NEK3-203ENST00000551355 COLGALT2Q8IYK4 626 aa11.13□□□□□ -0.63
NEK3-203ENST00000551355 TMEM86AQ8N2M4 240 aa11.13□□□□□ -0.63
NEK3-203ENST00000551355 TXLNBQ8N3L3 684 aa11.13□□□□□ -0.63
NEK3-203ENST00000551355 APPL2Q8NEU8 664 aa11.13□□□□□ -0.63
NEK3-203ENST00000551355 PHOSPHO2Q8TCD6 241 aa11.13□□□□□ -0.63
NEK3-203ENST00000551355 FAM84AQ96KN4 292 aa11.13□□□□□ -0.63
NEK3-203ENST00000551355 MMS19Q96T76 1030 aa11.13□□□□□ -0.63
NEK3-203ENST00000551355 COLEC11Q9BWP8 271 aa11.13□□□□□ -0.63
NEK3-203ENST00000551355 GPR88Q9GZN0 384 aa11.13□□□□□ -0.63
NEK3-203ENST00000551355 DEF6Q9H4E7 631 aa11.13□□□□□ -0.63
NEK3-203ENST00000551355 LUC7LQ9NQ29 371 aaKnown RBP11.13□□□□□ -0.63
NEK3-203ENST00000551355 CISHQ9NSE2 258 aa11.13□□□□□ -0.63
NEK3-203ENST00000551355 KIAA1257Q9ULG3 409 aa11.13□□□□□ -0.63
NEK3-203ENST00000551355 BARX2Q9UMQ3 279 aaPredicted RBP11.13□□□□□ -0.63
NEK3-203ENST00000551355 PCDHB4Q9Y5E5 795 aa11.13□□□□□ -0.63
NEK3-203ENST00000551355 SNX9Q9Y5X1 595 aa11.13□□□□□ -0.63
NEK3-203ENST00000551355 DNAH12Q6ZR08 3092 aa11.13□□□□□ -0.63
NEK3-203ENST00000551355 CASTOR2A6NHX0 329 aa11.12□□□□□ -0.63
NEK3-203ENST00000551355 TBKBP1A7MCY6 615 aa11.12□□□□□ -0.63
NEK3-203ENST00000551355 CCP110O43303 1012 aa11.12□□□□□ -0.63
NEK3-203ENST00000551355 CAPN15O75808 1086 aa11.12□□□□□ -0.63
NEK3-203ENST00000551355 B3GAT3O94766 335 aa11.12□□□□□ -0.63
NEK3-203ENST00000551355 PAEPP09466 180 aa11.12□□□□□ -0.63
NEK3-203ENST00000551355 ACRP10323 421 aa11.12□□□□□ -0.63
NEK3-203ENST00000551355 ACO1P21399 889 aaKnown RBP11.12□□□□□ -0.63
NEK3-203ENST00000551355 LHX1P48742 406 aa11.12□□□□□ -0.63
NEK3-203ENST00000551355 AARSP49588 968 aaKnown RBP eCLIP11.12□□□□□ -0.63
NEK3-203ENST00000551355 PDE6CP51160 858 aa11.12□□□□□ -0.63
NEK3-203ENST00000551355 CLCNKBP51801 687 aa11.12□□□□□ -0.63
NEK3-203ENST00000551355 AFF1P51825 1210 aaKnown RBP11.12□□□□□ -0.63
NEK3-203ENST00000551355 CCZ1BP86790 482 aa11.12□□□□□ -0.63
NEK3-203ENST00000551355 CCZ1P86791 482 aaPredicted RBP11.12□□□□□ -0.63
NEK3-203ENST00000551355 GOLGA8FQ08AF8 430 aa11.12□□□□□ -0.63
NEK3-203ENST00000551355 GOLGA8DPQ0D2H9 430 aa11.12□□□□□ -0.63
NEK3-203ENST00000551355 INCA1Q0VD86 236 aa11.12□□□□□ -0.63
NEK3-203ENST00000551355 ELAVL2Q12926 359 aaKnown RBP11.12□□□□□ -0.63
NEK3-203ENST00000551355 TDRD12Q587J7 1177 aaKnown RBP11.12□□□□□ -0.63
NEK3-203ENST00000551355 PPP1R2P3Q6NXS1 205 aa11.12□□□□□ -0.63
NEK3-203ENST00000551355 TMEM270Q6UE05 265 aa11.12□□□□□ -0.63
NEK3-203ENST00000551355 ZNF365Q70YC5 407 aa11.12□□□□□ -0.63
NEK3-203ENST00000551355 LIMS2Q7Z4I7 341 aa11.12□□□□□ -0.63
NEK3-203ENST00000551355 TMEM139Q8IV31 216 aa11.12□□□□□ -0.63
NEK3-203ENST00000551355 CMTR2Q8IYT2 770 aaKnown RBP11.12□□□□□ -0.63
NEK3-203ENST00000551355 TNS4Q8IZW8 715 aa11.12□□□□□ -0.63
NEK3-203ENST00000551355 UBR7Q8N806 425 aa11.12□□□□□ -0.63
NEK3-203ENST00000551355 HERVK_113Q902F9 699 aa11.12□□□□□ -0.63
NEK3-203ENST00000551355 SLC9A7Q96T83 725 aa11.12□□□□□ -0.63
NEK3-203ENST00000551355 NHEJ1Q9H9Q4 299 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms