RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 C1orf127Q8N9H9 656 aa12.28□□□□□ -0.44
RAB5C-208ENST00000551338 CXorf38Q8TB03 319 aa12.28□□□□□ -0.44
RAB5C-208ENST00000551338 NLRP7Q8WX94 980 aa12.28□□□□□ -0.44
RAB5C-208ENST00000551338 ZNF606Q8WXB4 792 aa12.28□□□□□ -0.44
RAB5C-208ENST00000551338 CAVIN3Q969G5 261 aa12.28□□□□□ -0.44
RAB5C-208ENST00000551338 GDAP1L1Q96MZ0 367 aa12.28□□□□□ -0.44
RAB5C-208ENST00000551338 BCO2Q9BYV7 579 aa12.28□□□□□ -0.44
RAB5C-208ENST00000551338 TRIM7Q9C029 511 aa12.28□□□□□ -0.44
RAB5C-208ENST00000551338 SDCBP2Q9H190 292 aa12.28□□□□□ -0.44
RAB5C-208ENST00000551338 CISHQ9NSE2 258 aa12.28□□□□□ -0.44
RAB5C-208ENST00000551338 ANAPC7Q9UJX3 599 aa12.28□□□□□ -0.44
RAB5C-208ENST00000551338 A0A0U1RQG5 324 aaPredicted RBP12.27□□□□□ -0.45
RAB5C-208ENST00000551338 CCDC66A2RUB6 948 aa12.27□□□□□ -0.45
RAB5C-208ENST00000551338 HAS3O00219 553 aa12.27□□□□□ -0.45
RAB5C-208ENST00000551338 SART1O43290 800 aaKnown RBP12.27□□□□□ -0.45
RAB5C-208ENST00000551338 SPOPO43791 374 aa12.27□□□□□ -0.45
RAB5C-208ENST00000551338 IGHA2P01877 340 aa12.27□□□□□ -0.45
RAB5C-208ENST00000551338 SMIM10L2AP0DMW4 78 aa12.27□□□□□ -0.45
RAB5C-208ENST00000551338 SMIM10L2BP0DMW5 78 aa12.27□□□□□ -0.45
RAB5C-208ENST00000551338 FGFR4P22455 802 aa12.27□□□□□ -0.45
RAB5C-208ENST00000551338 AARSP49588 968 aaKnown RBP eCLIP12.27□□□□□ -0.45
RAB5C-208ENST00000551338 PSEN2P49810 448 aa12.27□□□□□ -0.45
RAB5C-208ENST00000551338 C1QBPQ07021 282 aaKnown RBP12.27□□□□□ -0.45
RAB5C-208ENST00000551338 NNTQ13423 1086 aa12.27□□□□□ -0.45
RAB5C-208ENST00000551338 HIC1Q14526 733 aa12.27□□□□□ -0.45
RAB5C-208ENST00000551338 KYAT1Q16773 422 aa12.27□□□□□ -0.45
RAB5C-208ENST00000551338 C2CD6Q53TS8 623 aa12.27□□□□□ -0.45
RAB5C-208ENST00000551338 ZNF667Q5HYK9 610 aa12.27□□□□□ -0.45
RAB5C-208ENST00000551338 SEL1L2Q5TEA6 688 aa12.27□□□□□ -0.45
RAB5C-208ENST00000551338 LIN9Q5TKA1 542 aa12.27□□□□□ -0.45
RAB5C-208ENST00000551338 PPP1R2P3Q6NXS1 205 aa12.27□□□□□ -0.45
RAB5C-208ENST00000551338 MMS22LQ6ZRQ5 1243 aa12.27□□□□□ -0.45
RAB5C-208ENST00000551338 PHLDB2Q86SQ0 1253 aa12.27□□□□□ -0.45
RAB5C-208ENST00000551338 TLK2Q86UE8 772 aa12.27□□□□□ -0.45
RAB5C-208ENST00000551338 IFNL1Q8IU54 200 aa12.27□□□□□ -0.45
RAB5C-208ENST00000551338 TSEN2Q8NCE0 465 aaKnown RBP12.27□□□□□ -0.45
RAB5C-208ENST00000551338 PPP1R13LQ8WUF5 828 aa12.27□□□□□ -0.45
RAB5C-208ENST00000551338 VCPIP1Q96JH7 1222 aa12.27□□□□□ -0.45
RAB5C-208ENST00000551338 SCLT1Q96NL6 688 aa12.27□□□□□ -0.45
RAB5C-208ENST00000551338 ADAMTS10Q9H324 1103 aa12.27□□□□□ -0.45
RAB5C-208ENST00000551338 ACBD3Q9H3P7 528 aa12.27□□□□□ -0.45
RAB5C-208ENST00000551338 ASB7Q9H672 318 aa12.27□□□□□ -0.45
RAB5C-208ENST00000551338 NFU1Q9UMS0 254 aa12.27□□□□□ -0.45
RAB5C-208ENST00000551338 PCDHA3Q9Y5H8 950 aa12.27□□□□□ -0.45
RAB5C-208ENST00000551338 SMIM35A0A1B0GVV1 85 aa12.26□□□□□ -0.45
RAB5C-208ENST00000551338 MBLAC1A4D2B0 266 aaPredicted RBP12.26□□□□□ -0.45
RAB5C-208ENST00000551338 PHF2O75151 1096 aa12.26□□□□□ -0.45
RAB5C-208ENST00000551338 ERLIN2O94905 339 aa12.26□□□□□ -0.45
RAB5C-208ENST00000551338 WEE2P0C1S8 567 aa12.26□□□□□ -0.45
RAB5C-208ENST00000551338 FAM153BP0C7A2 387 aa12.26□□□□□ -0.45
RAB5C-208ENST00000551338 PYGMP11217 842 aa12.26□□□□□ -0.45
RAB5C-208ENST00000551338 HSPA6P17066 643 aa12.26□□□□□ -0.45
RAB5C-208ENST00000551338 CYP2B6P20813 491 aa12.26□□□□□ -0.45
RAB5C-208ENST00000551338 ECHS1P30084 290 aa12.26□□□□□ -0.45
RAB5C-208ENST00000551338 CDH5P33151 784 aaPredicted RBP12.26□□□□□ -0.45
RAB5C-208ENST00000551338 CYP2C19P33261 490 aa12.26□□□□□ -0.45
RAB5C-208ENST00000551338 RGS2P41220 211 aa12.26□□□□□ -0.45
RAB5C-208ENST00000551338 GRM5P41594 1212 aa12.26□□□□□ -0.45
RAB5C-208ENST00000551338 RAP1GAPP47736 663 aa12.26□□□□□ -0.45
RAB5C-208ENST00000551338 YWHAEP62258 255 aaKnown RBP12.26□□□□□ -0.45
RAB5C-208ENST00000551338 ADAM17P78536 824 aa12.26□□□□□ -0.45
RAB5C-208ENST00000551338 MFSD10Q14728 455 aa12.26□□□□□ -0.45
RAB5C-208ENST00000551338 SIX1Q15475 284 aaPredicted RBP12.26□□□□□ -0.45
RAB5C-208ENST00000551338 TRADDQ15628 312 aa12.26□□□□□ -0.45
RAB5C-208ENST00000551338 CLUL1Q15846 466 aa12.26□□□□□ -0.45
RAB5C-208ENST00000551338 FAM153CQ494X1 144 aa12.26□□□□□ -0.45
RAB5C-208ENST00000551338 PLEKHA7Q6IQ23 1121 aa12.26□□□□□ -0.45
RAB5C-208ENST00000551338 RUFY4Q6ZNE9 571 aa12.26□□□□□ -0.45
RAB5C-208ENST00000551338 ZDHHC14Q8IZN3 488 aa12.26□□□□□ -0.45
RAB5C-208ENST00000551338 C1orf131Q8NDD1 294 aaKnown RBP12.26□□□□□ -0.45
RAB5C-208ENST00000551338 TFAP2BQ92481 460 aa12.26□□□□□ -0.45
RAB5C-208ENST00000551338 NAP1L3Q99457 506 aaPredicted RBP12.26□□□□□ -0.45
RAB5C-208ENST00000551338 APBA2Q99767 749 aa12.26□□□□□ -0.45
RAB5C-208ENST00000551338 FAM49AQ9H0Q0 323 aaPredicted RBP12.26□□□□□ -0.45
RAB5C-208ENST00000551338 VRTNQ9H8Y1 702 aa12.26□□□□□ -0.45
RAB5C-208ENST00000551338 PRDM10Q9NQV6 1147 aa12.26□□□□□ -0.45
RAB5C-208ENST00000551338 ADAM22Q9P0K1 906 aa12.26□□□□□ -0.45
RAB5C-208ENST00000551338 FAM153AQ9UHL3 310 aa12.26□□□□□ -0.45
RAB5C-208ENST00000551338 PCDHGC3Q9UN70 934 aa12.26□□□□□ -0.45
RAB5C-208ENST00000551338 A0A1B0GUA9 196 aa12.25□□□□□ -0.45
RAB5C-208ENST00000551338 TCRBV5S1A1TA0A578 114 aa12.25□□□□□ -0.45
RAB5C-208ENST00000551338 POLR3GO15318 223 aaPredicted RBP12.25□□□□□ -0.45
RAB5C-208ENST00000551338 TTI1O43156 1089 aa12.25□□□□□ -0.45
RAB5C-208ENST00000551338 GPR32O75388 356 aa12.25□□□□□ -0.45
RAB5C-208ENST00000551338 GJB6O95452 261 aa12.25□□□□□ -0.45
RAB5C-208ENST00000551338 NPTXRO95502 500 aa12.25□□□□□ -0.45
RAB5C-208ENST00000551338 LSM8O95777 96 aaKnown RBP12.25□□□□□ -0.45
RAB5C-208ENST00000551338 ITGB3P05106 788 aa12.25□□□□□ -0.45
RAB5C-208ENST00000551338 KRT19P08727 400 aa12.25□□□□□ -0.45
RAB5C-208ENST00000551338 CYP2C9P11712 490 aa12.25□□□□□ -0.45
RAB5C-208ENST00000551338 MMP8P22894 467 aa12.25□□□□□ -0.45
RAB5C-208ENST00000551338 GUCY2FP51841 1108 aa12.25□□□□□ -0.45
RAB5C-208ENST00000551338 GPS2Q13227 327 aa12.25□□□□□ -0.45
RAB5C-208ENST00000551338 TMEM132DQ14C87 1099 aa12.25□□□□□ -0.45
RAB5C-208ENST00000551338 KIZQ2M2Z5 673 aa12.25□□□□□ -0.45
RAB5C-208ENST00000551338 DCAF4L1Q3SXM0 396 aa12.25□□□□□ -0.45
RAB5C-208ENST00000551338 ZNF394Q53GI3 561 aa12.25□□□□□ -0.45
RAB5C-208ENST00000551338 ADAT2Q7Z6V5 191 aaKnown RBP12.25□□□□□ -0.45
RAB5C-208ENST00000551338 SAPCD2Q86UD0 394 aa12.25□□□□□ -0.45
RAB5C-208ENST00000551338 SLC13A5Q86YT5 568 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms