RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 NOC2LQ9Y3T9 749 aaKnown RBP21.05■□□□□ 0.96
SSH1-209ENST00000551165 THAP12O43422 761 aa21.05■□□□□ 0.96
SSH1-209ENST00000551165 KIF4AO95239 1232 aa21.05■□□□□ 0.96
SSH1-209ENST00000551165 CTSHP09668 335 aa21.05■□□□□ 0.96
SSH1-209ENST00000551165 BPIFB4P59827 614 aa21.05■□□□□ 0.96
SSH1-209ENST00000551165 KLHDC9Q8NEP7 349 aa21.05■□□□□ 0.96
SSH1-209ENST00000551165 RABGGTAQ92696 567 aa21.05■□□□□ 0.96
SSH1-209ENST00000551165 ZNF653Q96CK0 615 aa21.05■□□□□ 0.96
SSH1-209ENST00000551165 CELF4Q9BZC1 486 aaKnown RBP21.05■□□□□ 0.96
SSH1-209ENST00000551165 ABCB6Q9NP58 842 aa21.05■□□□□ 0.96
SSH1-209ENST00000551165 KLK14Q9P0G3 267 aa21.05■□□□□ 0.96
SSH1-209ENST00000551165 PPEF2O14830 753 aa21.04■□□□□ 0.96
SSH1-209ENST00000551165 CYP1A1P04798 512 aaPredicted RBP21.04■□□□□ 0.96
SSH1-209ENST00000551165 BRD2P25440 801 aaKnown RBP21.04■□□□□ 0.96
SSH1-209ENST00000551165 NKX3-2P78367 333 aa21.04■□□□□ 0.96
SSH1-209ENST00000551165 RPS6KA1Q15418 735 aa21.04■□□□□ 0.96
SSH1-209ENST00000551165 PEX26Q7Z412 305 aa21.04■□□□□ 0.96
SSH1-209ENST00000551165 FAM228AQ86W67 206 aa21.04■□□□□ 0.96
SSH1-209ENST00000551165 ZNF606Q8WXB4 792 aa21.04■□□□□ 0.96
SSH1-209ENST00000551165 TFAP2BQ92481 460 aa21.04■□□□□ 0.96
SSH1-209ENST00000551165 C18orf25Q96B23 403 aaPredicted RBP21.04■□□□□ 0.96
SSH1-209ENST00000551165 DPP3Q9NY33 737 aa21.04■□□□□ 0.96
SSH1-209ENST00000551165 HMGXB4Q9UGU5 601 aa21.04■□□□□ 0.96
SSH1-209ENST00000551165 CDY2AQ9Y6F7 541 aa21.04■□□□□ 0.96
SSH1-209ENST00000551165 RECQL4O94761 1208 aa21.04■□□□□ 0.96
SSH1-209ENST00000551165 POU5F1Q01860 360 aaKnown RBP21.04■□□□□ 0.96
SSH1-209ENST00000551165 KYAT1Q16773 422 aa21.04■□□□□ 0.96
SSH1-209ENST00000551165 ZNF667Q5HYK9 610 aa21.04■□□□□ 0.96
SSH1-209ENST00000551165 NME8Q8N427 588 aa21.04■□□□□ 0.96
SSH1-209ENST00000551165 SNX27Q96L92 541 aa21.04■□□□□ 0.96
SSH1-209ENST00000551165 PARD6BQ9BYG5 372 aa21.04■□□□□ 0.96
SSH1-209ENST00000551165 PDCL3Q9H2J4 239 aa21.04■□□□□ 0.96
SSH1-209ENST00000551165 TUBGCP4Q9UGJ1 667 aa21.04■□□□□ 0.96
SSH1-209ENST00000551165 KCNK3O14649 394 aa21.03■□□□□ 0.96
SSH1-209ENST00000551165 ZNF677Q86XU0 584 aa21.03■□□□□ 0.96
SSH1-209ENST00000551165 PNKPQ96T60 521 aa21.03■□□□□ 0.96
SSH1-209ENST00000551165 CFHR5Q9BXR6 569 aa21.03■□□□□ 0.96
SSH1-209ENST00000551165 TRIM6Q9C030 488 aaPredicted RBP21.03■□□□□ 0.96
SSH1-209ENST00000551165 TSKSQ9UJT2 592 aa21.03■□□□□ 0.96
SSH1-209ENST00000551165 C2CD2Q9Y426 696 aa21.03■□□□□ 0.96
SSH1-209ENST00000551165 TMEM110-MUSTN1A8MSY1 372 aa21.03■□□□□ 0.96
SSH1-209ENST00000551165 CYP1A2P05177 515 aa21.03■□□□□ 0.96
SSH1-209ENST00000551165 MRPS6P82932 125 aaKnown RBP21.03■□□□□ 0.96
SSH1-209ENST00000551165 MAP3K21Q5TCX8 1036 aa21.03■□□□□ 0.96
SSH1-209ENST00000551165 TAF2Q6P1X5 1199 aa21.03■□□□□ 0.96
SSH1-209ENST00000551165 RHOT2Q8IXI1 618 aa21.03■□□□□ 0.96
SSH1-209ENST00000551165 REM2Q8IYK8 340 aaPredicted RBP21.03■□□□□ 0.96
SSH1-209ENST00000551165 ZNF784Q8NCA9 323 aaPredicted RBP21.03■□□□□ 0.96
SSH1-209ENST00000551165 HPDLQ96IR7 371 aa21.03■□□□□ 0.96
SSH1-209ENST00000551165 TWNKQ96RR1 684 aa21.03■□□□□ 0.96
SSH1-209ENST00000551165 NUP85Q9BW27 656 aa21.03■□□□□ 0.96
SSH1-209ENST00000551165 BCO2Q9BYV7 579 aa21.03■□□□□ 0.96
SSH1-209ENST00000551165 THSD7BQ9C0I4 1608 aa21.03■□□□□ 0.96
SSH1-209ENST00000551165 CHRNA1P02708 482 aa21.02■□□□□ 0.96
SSH1-209ENST00000551165 H2AFXP16104 143 aaPredicted RBP21.02■□□□□ 0.96
SSH1-209ENST00000551165 NOMO3P69849 1222 aa21.02■□□□□ 0.96
SSH1-209ENST00000551165 MRPS25P82663 173 aaKnown RBP21.02■□□□□ 0.96
SSH1-209ENST00000551165 CKAP4Q07065 602 aaKnown RBP21.02■□□□□ 0.96
SSH1-209ENST00000551165 MCOLN2Q8IZK6 566 aa21.02■□□□□ 0.96
SSH1-209ENST00000551165 GPR161Q8N6U8 529 aaKnown RBP21.02■□□□□ 0.96
SSH1-209ENST00000551165 TRIM7Q9C029 511 aa21.02■□□□□ 0.96
SSH1-209ENST00000551165 CNOT8Q9UFF9 292 aaKnown RBP21.02■□□□□ 0.96
SSH1-209ENST00000551165 RRM1P23921 792 aa21.02■□□□□ 0.96
SSH1-209ENST00000551165 ALKAL1Q6UXT8 129 aa21.02■□□□□ 0.96
SSH1-209ENST00000551165 PDCL2Q8N4E4 241 aa21.02■□□□□ 0.96
SSH1-209ENST00000551165 ARRDC4Q8NCT1 418 aa21.02■□□□□ 0.96
SSH1-209ENST00000551165 RAET1EQ8TD07 263 aa21.02■□□□□ 0.96
SSH1-209ENST00000551165 GTF3C4Q9UKN8 822 aa21.02■□□□□ 0.96
SSH1-209ENST00000551165 HMGCRP04035 888 aa21.01■□□□□ 0.95
SSH1-209ENST00000551165 CENPCQ03188 943 aa21.01■□□□□ 0.95
SSH1-209ENST00000551165 MESDQ14696 234 aa21.01■□□□□ 0.95
SSH1-209ENST00000551165 ZBTB6Q15916 424 aa21.01■□□□□ 0.95
SSH1-209ENST00000551165 SERINC5Q86VE9 423 aa21.01■□□□□ 0.95
SSH1-209ENST00000551165 SPATA4Q8NEY3 305 aa21.01■□□□□ 0.95
SSH1-209ENST00000551165 WHAMMQ8TF30 809 aa21.01■□□□□ 0.95
SSH1-209ENST00000551165 TAF4BQ92750 862 aa21.01■□□□□ 0.95
SSH1-209ENST00000551165 HES6Q96HZ4 224 aa21.01■□□□□ 0.95
SSH1-209ENST00000551165 ALG6Q9Y672 507 aa21.01■□□□□ 0.95
SSH1-209ENST00000551165 SCN1AP35498 2009 aa21.01■□□□□ 0.95
SSH1-209ENST00000551165 HADHBP55084 474 aaKnown RBP21.01■□□□□ 0.95
SSH1-209ENST00000551165 TCEAL1Q15170 157 aa21.01■□□□□ 0.95
SSH1-209ENST00000551165 PCBP1Q15365 356 aaKnown RBP eCLIP21.01■□□□□ 0.95
SSH1-209ENST00000551165 SMG8Q8ND04 991 aaKnown RBP21.01■□□□□ 0.95
SSH1-209ENST00000551165 HINFPQ9BQA5 517 aa21.01■□□□□ 0.95
SSH1-209ENST00000551165 C11orf70Q9BRQ4 267 aa21.01■□□□□ 0.95
SSH1-209ENST00000551165 DDX20Q9UHI6 824 aaKnown RBP21.01■□□□□ 0.95
SSH1-209ENST00000551165 AMFRQ9UKV5 643 aa21.01■□□□□ 0.95
SSH1-209ENST00000551165 MEIS3P2A8K0S8 358 aa21■□□□□ 0.95
SSH1-209ENST00000551165 AXLP30530 894 aa21■□□□□ 0.95
SSH1-209ENST00000551165 CCDC181Q5TID7 509 aa21■□□□□ 0.95
SSH1-209ENST00000551165 MON1BQ7L1V2 547 aa21■□□□□ 0.95
SSH1-209ENST00000551165 SYCE1Q8N0S2 351 aa21■□□□□ 0.95
SSH1-209ENST00000551165 ZNF564Q8TBZ8 553 aaPredicted RBP21■□□□□ 0.95
SSH1-209ENST00000551165 PLEKHA5Q9HAU0 1116 aa21■□□□□ 0.95
SSH1-209ENST00000551165 ITGA11Q9UKX5 1188 aa21■□□□□ 0.95
SSH1-209ENST00000551165 DDX3YO15523 660 aaKnown RBP21■□□□□ 0.95
SSH1-209ENST00000551165 NSFP46459 744 aaKnown RBP21■□□□□ 0.95
SSH1-209ENST00000551165 CLCN6P51797 869 aa21■□□□□ 0.95
SSH1-209ENST00000551165 YARSP54577 528 aaKnown RBP21■□□□□ 0.95
SSH1-209ENST00000551165 RAD23BP54727 409 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms