RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 LILRA4P59901 499 aa16.67■□□□□ 0.26
PRPF40B-211ENST00000551063 TFAMQ00059 246 aaKnown RBP16.67■□□□□ 0.26
PRPF40B-211ENST00000551063 SNRNP35Q16560 246 aaKnown RBP16.67■□□□□ 0.26
PRPF40B-211ENST00000551063 GPR149Q86SP6 731 aa16.67■□□□□ 0.26
PRPF40B-211ENST00000551063 PALB2Q86YC2 1186 aa16.67■□□□□ 0.26
PRPF40B-211ENST00000551063 GLYCTKQ8IVS8 523 aa16.67■□□□□ 0.26
PRPF40B-211ENST00000551063 ELOA2Q8IYF1 753 aaPredicted RBP16.67■□□□□ 0.26
PRPF40B-211ENST00000551063 TMEM130Q8N3G9 435 aa16.67■□□□□ 0.26
PRPF40B-211ENST00000551063 C12orf76Q8N812 135 aaPredicted RBP16.67■□□□□ 0.26
PRPF40B-211ENST00000551063 KREMEN2Q8NCW0 462 aa16.67■□□□□ 0.26
PRPF40B-211ENST00000551063 NOC3LQ8WTT2 800 aaKnown RBP16.67■□□□□ 0.26
PRPF40B-211ENST00000551063 ZNF560Q96MR9 790 aa16.67■□□□□ 0.26
PRPF40B-211ENST00000551063 APOL5Q9BWW9 433 aa16.67■□□□□ 0.26
PRPF40B-211ENST00000551063 OXCT2Q9BYC2 517 aaPredicted RBP16.67■□□□□ 0.26
PRPF40B-211ENST00000551063 KCTD10Q9H3F6 313 aa16.67■□□□□ 0.26
PRPF40B-211ENST00000551063 PDE11AQ9HCR9 933 aa16.67■□□□□ 0.26
PRPF40B-211ENST00000551063 RMND1Q9NWS8 449 aa16.67■□□□□ 0.26
PRPF40B-211ENST00000551063 ZDHHC7Q9NXF8 308 aa16.67■□□□□ 0.26
PRPF40B-211ENST00000551063 HOOK1Q9UJC3 728 aaKnown RBP16.67■□□□□ 0.26
PRPF40B-211ENST00000551063 CDY1Q9Y6F8 540 aa16.67■□□□□ 0.26
PRPF40B-211ENST00000551063 ADAM12O43184 909 aa16.66■□□□□ 0.26
PRPF40B-211ENST00000551063 TBC1D4O60343 1298 aa16.66■□□□□ 0.26
PRPF40B-211ENST00000551063 TMEM191BP0C7N4 346 aa16.66■□□□□ 0.26
PRPF40B-211ENST00000551063 ODC1P11926 461 aa16.66■□□□□ 0.26
PRPF40B-211ENST00000551063 OR1D2P34982 312 aa16.66■□□□□ 0.26
PRPF40B-211ENST00000551063 PNPLA4P41247 253 aa16.66■□□□□ 0.26
PRPF40B-211ENST00000551063 TAF6P49848 677 aa16.66■□□□□ 0.26
PRPF40B-211ENST00000551063 YWHAHQ04917 246 aaPredicted RBP16.66■□□□□ 0.26
PRPF40B-211ENST00000551063 MYBPC2Q14324 1141 aa16.66■□□□□ 0.26
PRPF40B-211ENST00000551063 ATAT1Q5SQI0 421 aa16.66■□□□□ 0.26
PRPF40B-211ENST00000551063 LIN9Q5TKA1 542 aa16.66■□□□□ 0.26
PRPF40B-211ENST00000551063 TMC5Q6UXY8 1006 aa16.66■□□□□ 0.26
PRPF40B-211ENST00000551063 DSTYKQ6XUX3 929 aa16.66■□□□□ 0.26
PRPF40B-211ENST00000551063 WDR49Q8IV35 697 aa16.66■□□□□ 0.26
PRPF40B-211ENST00000551063 SLC9A9Q8IVB4 645 aa16.66■□□□□ 0.26
PRPF40B-211ENST00000551063 GUF1Q8N442 669 aaKnown RBP16.66■□□□□ 0.26
PRPF40B-211ENST00000551063 ANKRD36BP1Q96IX9 119 aa16.66■□□□□ 0.26
PRPF40B-211ENST00000551063 ITGA11Q9UKX5 1188 aa16.66■□□□□ 0.26
PRPF40B-211ENST00000551063 VWA8A3KMH1 1905 aa16.65■□□□□ 0.26
PRPF40B-211ENST00000551063 SPTLC1O15269 473 aa16.65■□□□□ 0.26
PRPF40B-211ENST00000551063 EXOC3O60645 756 aa16.65■□□□□ 0.26
PRPF40B-211ENST00000551063 KINO60870 393 aaKnown RBP16.65■□□□□ 0.26
PRPF40B-211ENST00000551063 PRPF40AO75400 957 aaKnown RBP16.65■□□□□ 0.26
PRPF40B-211ENST00000551063 ZMYND10O75800 440 aa16.65■□□□□ 0.26
PRPF40B-211ENST00000551063 OAZ2O95190 189 aa16.65■□□□□ 0.26
PRPF40B-211ENST00000551063 SMC2O95347 1197 aa16.65■□□□□ 0.26
PRPF40B-211ENST00000551063 ROR1Q01973 937 aa16.65■□□□□ 0.26
PRPF40B-211ENST00000551063 CYP24A1Q07973 514 aa16.65■□□□□ 0.26
PRPF40B-211ENST00000551063 PNOCQ13519 176 aa16.65■□□□□ 0.26
PRPF40B-211ENST00000551063 PSMD6Q15008 389 aa16.65■□□□□ 0.26
PRPF40B-211ENST00000551063 SV2CQ496J9 727 aa16.65■□□□□ 0.26
PRPF40B-211ENST00000551063 CTXN3Q4LDR2 81 aa16.65■□□□□ 0.26
PRPF40B-211ENST00000551063 RSPO2Q6UXX9 243 aaPredicted RBP16.65■□□□□ 0.26
PRPF40B-211ENST00000551063 RTL10Q7L3V2 364 aa16.65■□□□□ 0.26
PRPF40B-211ENST00000551063 USP37Q86T82 979 aa16.65■□□□□ 0.26
PRPF40B-211ENST00000551063 LRRC52Q8N7C0 313 aa16.65■□□□□ 0.26
PRPF40B-211ENST00000551063 C1orf127Q8N9H9 656 aa16.65■□□□□ 0.26
PRPF40B-211ENST00000551063 SENP8Q96LD8 212 aa16.65■□□□□ 0.26
PRPF40B-211ENST00000551063 GSDMAQ96QA5 445 aa16.65■□□□□ 0.26
PRPF40B-211ENST00000551063 INTS13Q9NVM9 706 aa16.65■□□□□ 0.26
PRPF40B-211ENST00000551063 FBXL5Q9UKA1 691 aa16.65■□□□□ 0.26
PRPF40B-211ENST00000551063 DSEQ9UL01 958 aa16.65■□□□□ 0.26
PRPF40B-211ENST00000551063 TRAF3IP3Q9Y228 551 aa16.65■□□□□ 0.26
PRPF40B-211ENST00000551063 LOC730098B7Z3J9 87 aa16.64■□□□□ 0.25
PRPF40B-211ENST00000551063 CALUO43852 315 aaPredicted RBP16.64■□□□□ 0.25
PRPF40B-211ENST00000551063 ITGB3P05106 788 aa16.64■□□□□ 0.25
PRPF40B-211ENST00000551063 CYP11A1P05108 521 aa16.64■□□□□ 0.25
PRPF40B-211ENST00000551063 POU2F2P09086 479 aa16.64■□□□□ 0.25
PRPF40B-211ENST00000551063 POLR2BP30876 1174 aaKnown RBP16.64■□□□□ 0.25
PRPF40B-211ENST00000551063 HOXA9P31269 272 aa16.64■□□□□ 0.25
PRPF40B-211ENST00000551063 NFIL3Q16649 462 aa16.64■□□□□ 0.25
PRPF40B-211ENST00000551063 CXorf38Q8TB03 319 aa16.64■□□□□ 0.25
PRPF40B-211ENST00000551063 SPATA20Q8TB22 786 aa16.64■□□□□ 0.25
PRPF40B-211ENST00000551063 FNBP1Q96RU3 617 aa16.64■□□□□ 0.25
PRPF40B-211ENST00000551063 GTPBP4Q9BZE4 634 aaKnown RBP16.64■□□□□ 0.25
PRPF40B-211ENST00000551063 MTMR12Q9C0I1 747 aa16.64■□□□□ 0.25
PRPF40B-211ENST00000551063 POMKQ9H5K3 350 aa16.64■□□□□ 0.25
PRPF40B-211ENST00000551063 DMAC2Q9NW81 257 aa16.64■□□□□ 0.25
PRPF40B-211ENST00000551063 OR6C75A6NL08 312 aa16.63■□□□□ 0.25
PRPF40B-211ENST00000551063 GADD45BO75293 160 aaPredicted RBP16.63■□□□□ 0.25
PRPF40B-211ENST00000551063 RFPL2O75678 378 aa16.63■□□□□ 0.25
PRPF40B-211ENST00000551063 TNNC2P02585 160 aa16.63■□□□□ 0.25
PRPF40B-211ENST00000551063 NR3C1P04150 777 aa16.63■□□□□ 0.25
PRPF40B-211ENST00000551063 C8AP07357 584 aa16.63■□□□□ 0.25
PRPF40B-211ENST00000551063 HNRNPA1P09651 372 aaKnown RBP eCLIP16.63■□□□□ 0.25
PRPF40B-211ENST00000551063 SPATA31D3P0C874 917 aa16.63■□□□□ 0.25
PRPF40B-211ENST00000551063 UBE2HP62256 183 aa16.63■□□□□ 0.25
PRPF40B-211ENST00000551063 RBP5P82980 135 aa16.63■□□□□ 0.25
PRPF40B-211ENST00000551063 DUOXA2Q1HG44 320 aa16.63■□□□□ 0.25
PRPF40B-211ENST00000551063 UVSSAQ2YD98 709 aa16.63■□□□□ 0.25
PRPF40B-211ENST00000551063 COBLL1Q53SF7 1204 aa16.63■□□□□ 0.25
PRPF40B-211ENST00000551063 TPGS2Q68CL5 300 aa16.63■□□□□ 0.25
PRPF40B-211ENST00000551063 OVOS1Q6IE37 1185 aa16.63■□□□□ 0.25
PRPF40B-211ENST00000551063 SPATA31D4Q6ZUB0 917 aa16.63■□□□□ 0.25
PRPF40B-211ENST00000551063 CCDC149Q6ZUS6 474 aa16.63■□□□□ 0.25
PRPF40B-211ENST00000551063 ZNF461Q8TAF7 563 aa16.63■□□□□ 0.25
PRPF40B-211ENST00000551063 SMARCE1Q969G3 411 aa16.63■□□□□ 0.25
PRPF40B-211ENST00000551063 ZNF707Q96C28 371 aaPredicted RBP16.63■□□□□ 0.25
PRPF40B-211ENST00000551063 MFSD14AQ96MC6 490 aa16.63■□□□□ 0.25
PRPF40B-211ENST00000551063 CGRRF1Q99675 332 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms