RNA–Protein interactions for RNA: ENST00000550851.5

LGR5-206, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 2

Gene LGR5, Length 4,095 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-206ENST00000550851 ACAD10Q6JQN1 1059 aa12.31□□□□□ -0.44
LGR5-206ENST00000550851 LRRC55Q6ZSA7 311 aa12.31□□□□□ -0.44
LGR5-206ENST00000550851 ZNF710Q8N1W2 664 aa12.31□□□□□ -0.44
LGR5-206ENST00000550851 CCDC33Q8N5R6 958 aa12.31□□□□□ -0.44
LGR5-206ENST00000550851 SNF8Q96H20 258 aa12.31□□□□□ -0.44
LGR5-206ENST00000550851 PRDM5Q9NQX1 630 aaPredicted RBP12.31□□□□□ -0.44
LGR5-206ENST00000550851 METTL5Q9NRN9 209 aaKnown RBP12.31□□□□□ -0.44
LGR5-206ENST00000550851 IL18RAPO95256 599 aa12.3□□□□□ -0.44
LGR5-206ENST00000550851 RBP3P10745 1247 aa12.3□□□□□ -0.44
LGR5-206ENST00000550851 CYP2C19P33261 490 aa12.3□□□□□ -0.44
LGR5-206ENST00000550851 CDH8P55286 799 aa12.3□□□□□ -0.44
LGR5-206ENST00000550851 ERVK-9P63128 1117 aa12.3□□□□□ -0.44
LGR5-206ENST00000550851 PPATQ06203 517 aa12.3□□□□□ -0.44
LGR5-206ENST00000550851 THOC5Q13769 683 aaKnown RBP12.3□□□□□ -0.44
LGR5-206ENST00000550851 BTBD8Q5XKL5 378 aa12.3□□□□□ -0.44
LGR5-206ENST00000550851 AFAP1L2Q8N4X5 818 aa12.3□□□□□ -0.44
LGR5-206ENST00000550851 FEZF2Q8TBJ5 459 aa12.3□□□□□ -0.44
LGR5-206ENST00000550851 URGCPQ8TCY9 931 aa12.3□□□□□ -0.44
LGR5-206ENST00000550851 ANKRD7Q92527 254 aa12.3□□□□□ -0.44
LGR5-206ENST00000550851 PPP1R12CQ9BZL4 782 aa12.3□□□□□ -0.44
LGR5-206ENST00000550851 RAB6BQ9NRW1 208 aa12.3□□□□□ -0.44
LGR5-206ENST00000550851 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.3□□□□□ -0.44
LGR5-206ENST00000550851 DPP3Q9NY33 737 aa12.3□□□□□ -0.44
LGR5-206ENST00000550851 MORC2Q9Y6X9 1032 aaPredicted RBP12.3□□□□□ -0.44
LGR5-206ENST00000550851 RRN3P2A6NIE6 340 aa12.3□□□□□ -0.44
LGR5-206ENST00000550851 RNF225M0QZC1 329 aaPredicted RBP12.3□□□□□ -0.44
LGR5-206ENST00000550851 KCNN4O15554 427 aa12.3□□□□□ -0.44
LGR5-206ENST00000550851 EGFRP00533 1210 aa12.3□□□□□ -0.44
LGR5-206ENST00000550851 GRIK1P39086 918 aa12.3□□□□□ -0.44
LGR5-206ENST00000550851 GTF2A1P52655 376 aaPredicted RBP12.3□□□□□ -0.44
LGR5-206ENST00000550851 KYNUQ16719 465 aa12.3□□□□□ -0.44
LGR5-206ENST00000550851 BTNL9Q6UXG8 535 aa12.3□□□□□ -0.44
LGR5-206ENST00000550851 GTF3C2Q8WUA4 911 aaPredicted RBP12.3□□□□□ -0.44
LGR5-206ENST00000550851 ATXN7L3BQ96GX2 97 aa12.3□□□□□ -0.44
LGR5-206ENST00000550851 GLT1D1Q96MS3 346 aa12.3□□□□□ -0.44
LGR5-206ENST00000550851 CISHQ9NSE2 258 aa12.3□□□□□ -0.44
LGR5-206ENST00000550851 ZSCAN5CA6NGD5 496 aaPredicted RBP12.3□□□□□ -0.44
LGR5-206ENST00000550851 PIK3CDO00329 1044 aa12.3□□□□□ -0.44
LGR5-206ENST00000550851 SH3BP5O60239 455 aa12.3□□□□□ -0.44
LGR5-206ENST00000550851 HMBSP08397 361 aa12.3□□□□□ -0.44
LGR5-206ENST00000550851 GNL1P36915 607 aaPredicted RBP12.3□□□□□ -0.44
LGR5-206ENST00000550851 ITGB3BPQ13352 177 aaPredicted RBP12.3□□□□□ -0.44
LGR5-206ENST00000550851 KCTD19Q17RG1 926 aaPredicted RBP12.3□□□□□ -0.44
LGR5-206ENST00000550851 KLRG1Q96E93 195 aa12.3□□□□□ -0.44
LGR5-206ENST00000550851 RBM15Q96T37 977 aaKnown RBP eCLIP12.3□□□□□ -0.442e-6■■□□□ 11.8
LGR5-206ENST00000550851 CNOT10Q9H9A5 744 aaKnown RBP12.3□□□□□ -0.44
LGR5-206ENST00000550851 RRP15Q9Y3B9 282 aaKnown RBP12.3□□□□□ -0.44
LGR5-206ENST00000550851 CCDC160A6NGH7 325 aa12.29□□□□□ -0.44
LGR5-206ENST00000550851 GAS2O43903 313 aaKnown RBP12.29□□□□□ -0.44
LGR5-206ENST00000550851 PHF2O75151 1096 aa12.29□□□□□ -0.44
LGR5-206ENST00000550851 SPAG7O75391 227 aa12.29□□□□□ -0.44
LGR5-206ENST00000550851 KRT37O76014 449 aa12.29□□□□□ -0.44
LGR5-206ENST00000550851 PCK1P35558 622 aa12.29□□□□□ -0.44
LGR5-206ENST00000550851 MMP14P50281 582 aa12.29□□□□□ -0.44
LGR5-206ENST00000550851 SESN3P58005 492 aa12.29□□□□□ -0.44
LGR5-206ENST00000550851 KYAT1Q16773 422 aa12.29□□□□□ -0.44
LGR5-206ENST00000550851 SAMD3Q8N6K7 520 aa12.29□□□□□ -0.44
LGR5-206ENST00000550851 REPS2Q8NFH8 660 aa12.29□□□□□ -0.44
LGR5-206ENST00000550851 HASPINQ8TF76 798 aa12.29□□□□□ -0.44
LGR5-206ENST00000550851 SLC13A1Q9BZW2 595 aa12.29□□□□□ -0.44
LGR5-206ENST00000550851 CARD9Q9H257 536 aa12.29□□□□□ -0.44
LGR5-206ENST00000550851 DDX56Q9NY93 547 aaKnown RBP12.29□□□□□ -0.44
LGR5-206ENST00000550851 ATP9BO43861 1147 aa12.29□□□□□ -0.44
LGR5-206ENST00000550851 NPM3O75607 178 aaKnown RBP12.29□□□□□ -0.44
LGR5-206ENST00000550851 GJB1P08034 283 aa12.29□□□□□ -0.44
LGR5-206ENST00000550851 OR1G1P47890 313 aa12.29□□□□□ -0.44
LGR5-206ENST00000550851 UGCGQ16739 394 aa12.29□□□□□ -0.44
LGR5-206ENST00000550851 GOLGA7BQ2TAP0 167 aa12.29□□□□□ -0.44
LGR5-206ENST00000550851 ARSHQ5FYA8 562 aa12.29□□□□□ -0.44
LGR5-206ENST00000550851 PRAMEF19Q5SWL8 479 aa12.29□□□□□ -0.44
LGR5-206ENST00000550851 ZNF449Q6P9G9 518 aa12.29□□□□□ -0.44
LGR5-206ENST00000550851 IRF2BP1Q8IU81 584 aa12.29□□□□□ -0.44
LGR5-206ENST00000550851 SPATA18Q8TC71 538 aa12.29□□□□□ -0.44
LGR5-206ENST00000550851 PITPNM3Q9BZ71 974 aa12.29□□□□□ -0.44
LGR5-206ENST00000550851 ALG13Q9NP73 1137 aaKnown RBP12.29□□□□□ -0.44
LGR5-206ENST00000550851 WDR35Q9P2L0 1181 aa12.29□□□□□ -0.44
LGR5-206ENST00000550851 CYP3A7-CYP3A51PA0A087WV96 503 aa12.29□□□□□ -0.44
LGR5-206ENST00000550851 DDX3XO00571 662 aaKnown RBP eCLIP12.29□□□□□ -0.442e-21■□□□□ 10.4
LGR5-206ENST00000550851 TBC1D12O60347 775 aa12.29□□□□□ -0.44
LGR5-206ENST00000550851 TADA2AO75478 443 aa12.29□□□□□ -0.44
LGR5-206ENST00000550851 CYP3A7P24462 503 aa12.29□□□□□ -0.44
LGR5-206ENST00000550851 CPT1AP50416 773 aa12.29□□□□□ -0.44
LGR5-206ENST00000550851 RASSF2P50749 326 aa12.29□□□□□ -0.44
LGR5-206ENST00000550851 OAZ1P54368 228 aa12.29□□□□□ -0.44
LGR5-206ENST00000550851 BYSLQ13895 437 aaKnown RBP12.29□□□□□ -0.44
LGR5-206ENST00000550851 TREML2Q5T2D2 321 aa12.29□□□□□ -0.44
LGR5-206ENST00000550851 DNAJB3Q8WWF6 145 aa12.29□□□□□ -0.44
LGR5-206ENST00000550851 SPIRE2Q8WWL2 714 aa12.29□□□□□ -0.44
LGR5-206ENST00000550851 EXT2Q93063 718 aa12.29□□□□□ -0.44
LGR5-206ENST00000550851 VPS11Q9H270 941 aa12.29□□□□□ -0.44
LGR5-206ENST00000550851 WDR70Q9NW82 654 aa12.29□□□□□ -0.44
LGR5-206ENST00000550851 GPC4O75487 556 aa12.28□□□□□ -0.44
LGR5-206ENST00000550851 AKAP5P24588 427 aa12.28□□□□□ -0.44
LGR5-206ENST00000550851 CDC42EP1Q00587 391 aa12.28□□□□□ -0.44
LGR5-206ENST00000550851 TAP1Q03518 808 aa12.28□□□□□ -0.44
LGR5-206ENST00000550851 DMTNQ08495 405 aa12.28□□□□□ -0.44
LGR5-206ENST00000550851 PIGHQ14442 188 aaPredicted RBP12.28□□□□□ -0.44
LGR5-206ENST00000550851 PLCB4Q15147 1175 aa12.28□□□□□ -0.44
LGR5-206ENST00000550851 HIF1AQ16665 826 aa12.28□□□□□ -0.44
LGR5-206ENST00000550851 LONRF1Q17RB8 773 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms