RNA–Protein interactions for RNA: ENST00000550584.6

PPFIA2-220, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 5,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-220ENST00000550584 HOXC8P31273 242 aa9.19□□□□□ -0.94
PPFIA2-220ENST00000550584 OTUD4Q01804 1114 aaKnown RBP9.19□□□□□ -0.94
PPFIA2-220ENST00000550584 PUDPQ08623 228 aa9.19□□□□□ -0.94
PPFIA2-220ENST00000550584 MAPK6Q16659 721 aa9.19□□□□□ -0.94
PPFIA2-220ENST00000550584 HIF1AQ16665 826 aa9.19□□□□□ -0.94
PPFIA2-220ENST00000550584 RABL6Q3YEC7 729 aaPredicted RBP9.19□□□□□ -0.94
PPFIA2-220ENST00000550584 IYDQ6PHW0 289 aa9.19□□□□□ -0.94
PPFIA2-220ENST00000550584 DARS2Q6PI48 645 aaKnown RBP9.19□□□□□ -0.94
PPFIA2-220ENST00000550584 ALLCQ8N6M5 410 aa9.19□□□□□ -0.94
PPFIA2-220ENST00000550584 PDCD6IPQ8WUM4 868 aaKnown RBP9.19□□□□□ -0.94
PPFIA2-220ENST00000550584 STAMQ92783 540 aa9.19□□□□□ -0.94
PPFIA2-220ENST00000550584 TMEM206Q9H813 350 aa9.19□□□□□ -0.94
PPFIA2-220ENST00000550584 KCNK4Q9NYG8 393 aa9.19□□□□□ -0.94
PPFIA2-220ENST00000550584 VPS54Q9P1Q0 977 aa9.19□□□□□ -0.94
PPFIA2-220ENST00000550584 BAIAP2Q9UQB8 552 aa9.19□□□□□ -0.94
PPFIA2-220ENST00000550584 TPRKBQ9Y3C4 175 aa9.19□□□□□ -0.94
PPFIA2-220ENST00000550584 PRKAA2P54646 552 aa9.19□□□□□ -0.94
PPFIA2-220ENST00000550584 MECOMQ03112 1051 aa9.19□□□□□ -0.94
PPFIA2-220ENST00000550584 TRAF2Q12933 501 aa9.19□□□□□ -0.94
PPFIA2-220ENST00000550584 BNIP1Q12981 228 aa9.19□□□□□ -0.94
PPFIA2-220ENST00000550584 USP4Q13107 963 aa9.19□□□□□ -0.94
PPFIA2-220ENST00000550584 BROXQ5VW32 411 aa9.19□□□□□ -0.94
PPFIA2-220ENST00000550584 ADCY4Q8NFM4 1077 aa9.19□□□□□ -0.94
PPFIA2-220ENST00000550584 CNDP1Q96KN2 507 aa9.19□□□□□ -0.94
PPFIA2-220ENST00000550584 GPATCH1Q9BRR8 931 aaKnown RBP9.19□□□□□ -0.94
PPFIA2-220ENST00000550584 PCMTD2Q9NV79 361 aa9.19□□□□□ -0.94
PPFIA2-220ENST00000550584 PHF11Q9UIL8 331 aa9.19□□□□□ -0.94
PPFIA2-220ENST00000550584 KDM5BQ9UGL1 1544 aa9.19□□□□□ -0.94
PPFIA2-220ENST00000550584 IRF6O14896 467 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 UFL1O94874 794 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 EYA4O95677 639 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 SNRPAP09012 282 aaKnown RBP9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 ENO2P09104 434 aaPredicted RBP9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 NFKBIAP25963 317 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 EPHB2P29323 1055 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 ALDH1A3P47895 512 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 ZNF394Q53GI3 561 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 RNF220Q5VTB9 566 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 TWF2Q6IBS0 349 aaKnown RBP9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 TTBK2Q6IQ55 1244 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 TRIM72Q6ZMU5 477 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 TDRD5Q8NAT2 981 aaKnown RBP9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 SMYD1Q8NB12 490 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 BBS2Q9BXC9 721 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 TMEM120AQ9BXJ8 343 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 ANKHQ9HCJ1 492 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 ARHGEF38Q9NXL2 777 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 PAMP19021 973 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 IREB2P48200 963 aaKnown RBP9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 NAA20P61599 178 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 MAPK7Q13164 816 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 LMBR1LQ6UX01 489 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 ZBTB49Q6ZSB9 765 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 MTDHQ86UE4 582 aaKnown RBP9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 GUF1Q8N442 669 aaKnown RBP9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 TINF2Q9BSI4 451 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 CLIC5Q9NZA1 410 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 SERPINB13Q9UIV8 391 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 AURKCQ9UQB9 309 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 CDK13Q14004 1512 aaKnown RBP9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 TMEM253P0C7T8 217 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 KITP10721 976 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 MYL4P12829 197 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 GP5P40197 560 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 PRIM2P49643 509 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 TRIM71Q2Q1W2 868 aaKnown RBP9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 PARP10Q53GL7 1025 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 VPS33BQ9H267 617 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 CYLDQ9NQC7 956 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 ZBTB21Q9ULJ3 1066 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 ADGBQ8N7X0 1667 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 SH2B2O14492 632 aaPredicted RBP9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 TLR3O15455 904 aaKnown RBP9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 SNAP91O60641 907 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 SNX2O60749 519 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 NUDT17P0C025 328 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 RAG1P15918 1043 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 GNG2P59768 71 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 ZNF354CQ86Y25 554 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 RHOT1Q8IXI2 618 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 ZBED8Q8IZ13 594 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 MAGEB6Q8N7X4 407 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 RBM17Q96I25 401 aaKnown RBP9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 ACAT2Q9BWD1 397 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 TUBGCP4Q9UGJ1 667 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 BACH1O14867 736 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 SLC16A3O15427 465 aaKnown RBP9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 CASP2P42575 452 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 GPD2P43304 727 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 MAGEA4P43358 317 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 ENPEPQ07075 957 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 ILF2Q12905 390 aaKnown RBP9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 KCNV1Q6PIU1 500 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 TMC3Q7Z5M5 1100 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 METTL16Q86W50 562 aaKnown RBP9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 ALDH16A1Q8IZ83 802 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 ANKS1AQ92625 1134 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 PFDN2Q9UHV9 154 aa9.18□□□□□ -0.94
PPFIA2-220ENST00000550584 CCDC182A6NF36 153 aa9.17□□□□□ -0.94
PPFIA2-220ENST00000550584 ATP9BO43861 1147 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms