RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 PAX3P23760 479 aa25.11■■□□□ 1.61
SMARCD1-209ENST00000550477 EPHB3P54753 998 aa25.11■■□□□ 1.61
SMARCD1-209ENST00000550477 NRLP54845 237 aa25.11■■□□□ 1.61
SMARCD1-209ENST00000550477 SLC12A3P55017 1021 aa25.11■■□□□ 1.61
SMARCD1-209ENST00000550477 GRM2Q14416 872 aa25.11■■□□□ 1.61
SMARCD1-209ENST00000550477 DGLUCYQ7Z3D6 616 aa25.11■■□□□ 1.61
SMARCD1-209ENST00000550477 HAUS6Q7Z4H7 955 aa25.11■■□□□ 1.61
SMARCD1-209ENST00000550477 SUMF1Q8NBK3 374 aa25.11■■□□□ 1.61
SMARCD1-209ENST00000550477 PNMA5Q96PV4 448 aa25.11■■□□□ 1.61
SMARCD1-209ENST00000550477 RPF1Q9H9Y2 349 aaKnown RBP25.11■■□□□ 1.61
SMARCD1-209ENST00000550477 OR6C75A6NL08 312 aa25.1■■□□□ 1.61
SMARCD1-209ENST00000550477 ZNF263O14978 683 aa25.1■■□□□ 1.61
SMARCD1-209ENST00000550477 SDHBP21912 280 aa25.1■■□□□ 1.61
SMARCD1-209ENST00000550477 GDI1P31150 447 aa25.1■■□□□ 1.61
SMARCD1-209ENST00000550477 UBA7P41226 1012 aa25.1■■□□□ 1.61
SMARCD1-209ENST00000550477 ALDH1A3P47895 512 aa25.1■■□□□ 1.61
SMARCD1-209ENST00000550477 C1orf228Q6PIY5 440 aa25.1■■□□□ 1.61
SMARCD1-209ENST00000550477 RNF19BQ6ZMZ0 732 aa25.1■■□□□ 1.61
SMARCD1-209ENST00000550477 CD302Q8IX05 232 aa25.1■■□□□ 1.61
SMARCD1-209ENST00000550477 YAF2Q8IY57 180 aa25.1■■□□□ 1.61
SMARCD1-209ENST00000550477 RASSF8Q8NHQ8 419 aa25.1■■□□□ 1.61
SMARCD1-209ENST00000550477 CEP72Q9P209 647 aa25.1■■□□□ 1.61
SMARCD1-209ENST00000550477 TUBGCP4Q9UGJ1 667 aa25.1■■□□□ 1.61
SMARCD1-209ENST00000550477 DMDP11532 3685 aa25.09■■□□□ 1.61
SMARCD1-209ENST00000550477 TTC26A0AVF1 554 aa25.09■■□□□ 1.61
SMARCD1-209ENST00000550477 HNRNPDLO14979 420 aaKnown RBP25.09■■□□□ 1.61
SMARCD1-209ENST00000550477 NCKAP1LP55160 1127 aa25.09■■□□□ 1.61
SMARCD1-209ENST00000550477 ARMCX5Q6P1M9 558 aa25.09■■□□□ 1.61
SMARCD1-209ENST00000550477 MYCT1Q8N699 235 aa25.09■■□□□ 1.61
SMARCD1-209ENST00000550477 ZSCAN18Q8TBC5 510 aaPredicted RBP25.09■■□□□ 1.61
SMARCD1-209ENST00000550477 FAM3CQ92520 227 aa25.09■■□□□ 1.61
SMARCD1-209ENST00000550477 RMDN1Q96DB5 314 aa25.09■■□□□ 1.61
SMARCD1-209ENST00000550477 KIF2CQ99661 725 aa25.09■■□□□ 1.61
SMARCD1-209ENST00000550477 ZNF334Q9HCZ1 680 aaPredicted RBP25.09■■□□□ 1.61
SMARCD1-209ENST00000550477 NDRG2Q9UN36 371 aaKnown RBP25.09■■□□□ 1.61
SMARCD1-209ENST00000550477 FAM13AO94988 1023 aa25.08■■□□□ 1.61
SMARCD1-209ENST00000550477 FGF19O95750 216 aa25.08■■□□□ 1.61
SMARCD1-209ENST00000550477 KRT18P05783 430 aaKnown RBP25.08■■□□□ 1.61
SMARCD1-209ENST00000550477 FCARP24071 287 aa25.08■■□□□ 1.61
SMARCD1-209ENST00000550477 EPHA5P54756 1037 aa25.08■■□□□ 1.61
SMARCD1-209ENST00000550477 MFSD6LQ8IWD5 586 aa25.08■■□□□ 1.61
SMARCD1-209ENST00000550477 HS6ST3Q8IZP7 471 aa25.08■■□□□ 1.61
SMARCD1-209ENST00000550477 ZBTB44Q8NCP5 570 aa25.08■■□□□ 1.61
SMARCD1-209ENST00000550477 BEST2Q8NFU1 509 aa25.08■■□□□ 1.61
SMARCD1-209ENST00000550477 CSGALNACT1Q8TDX6 532 aa25.08■■□□□ 1.61
SMARCD1-209ENST00000550477 KCNN1Q92952 543 aa25.08■■□□□ 1.61
SMARCD1-209ENST00000550477 TRPV4Q9HBA0 871 aa25.08■■□□□ 1.61
SMARCD1-209ENST00000550477 ASB3Q9Y575 518 aa25.08■■□□□ 1.61
SMARCD1-209ENST00000550477 PDCD11Q14690 1871 aaKnown RBP25.08■■□□□ 1.61
SMARCD1-209ENST00000550477 F5P12259 2224 aa25.07■■□□□ 1.6
SMARCD1-209ENST00000550477 OGTO15294 1046 aa25.07■■□□□ 1.6
SMARCD1-209ENST00000550477 BMP15O95972 392 aa25.07■■□□□ 1.6
SMARCD1-209ENST00000550477 CCR2P41597 374 aa25.07■■□□□ 1.6
SMARCD1-209ENST00000550477 SPAG1Q07617 926 aa25.07■■□□□ 1.6
SMARCD1-209ENST00000550477 GPR17Q13304 367 aa25.07■■□□□ 1.6
SMARCD1-209ENST00000550477 OVOS1Q6IE37 1185 aa25.07■■□□□ 1.6
SMARCD1-209ENST00000550477 VITQ6UXI7 678 aa25.07■■□□□ 1.6
SMARCD1-209ENST00000550477 MAP4K3Q8IVH8 894 aa25.07■■□□□ 1.6
SMARCD1-209ENST00000550477 DCLK2Q8N568 766 aa25.07■■□□□ 1.6
SMARCD1-209ENST00000550477 FAM212AQ96EL1 285 aa25.07■■□□□ 1.6
SMARCD1-209ENST00000550477 MSANTD3Q96H12 275 aa25.07■■□□□ 1.6
SMARCD1-209ENST00000550477 PARVGQ9HBI0 331 aa25.07■■□□□ 1.6
SMARCD1-209ENST00000550477 RAB23Q9ULC3 237 aa25.07■■□□□ 1.6
SMARCD1-209ENST00000550477 TBX20Q9UMR3 447 aa25.07■■□□□ 1.6
SMARCD1-209ENST00000550477 YIPF1Q9Y548 306 aa25.07■■□□□ 1.6
SMARCD1-209ENST00000550477 TIMM13Q9Y5L4 95 aaPredicted RBP25.07■■□□□ 1.6
SMARCD1-209ENST00000550477 OTOGLQ3ZCN5 2332 aa25.07■■□□□ 1.6
SMARCD1-209ENST00000550477 LACTBL1A8MY62 500 aa25.06■■□□□ 1.6
SMARCD1-209ENST00000550477 K7ENM7 598 aa25.06■■□□□ 1.6
SMARCD1-209ENST00000550477 MEFVO15553 781 aaPredicted RBP25.06■■□□□ 1.6
SMARCD1-209ENST00000550477 TYMPP19971 482 aa25.06■■□□□ 1.6
SMARCD1-209ENST00000550477 CACNB1Q02641 598 aaPredicted RBP25.06■■□□□ 1.6
SMARCD1-209ENST00000550477 MYBPC2Q14324 1141 aa25.06■■□□□ 1.6
SMARCD1-209ENST00000550477 ZBTB6Q15916 424 aa25.06■■□□□ 1.6
SMARCD1-209ENST00000550477 TMEM119Q4V9L6 283 aa25.06■■□□□ 1.6
SMARCD1-209ENST00000550477 MAMSTRQ6ZN01 415 aa25.06■■□□□ 1.6
SMARCD1-209ENST00000550477 ZSWIM3Q96MP5 696 aa25.06■■□□□ 1.6
SMARCD1-209ENST00000550477 PGLYRP2Q96PD5 576 aa25.06■■□□□ 1.6
SMARCD1-209ENST00000550477 PIAS3Q9Y6X2 628 aa25.06■■□□□ 1.6
SMARCD1-209ENST00000550477 PATJQ8NI35 1801 aa25.06■■□□□ 1.6
SMARCD1-209ENST00000550477 NPHP3-ACAD11A0A0J9YXS1 232 aa25.05■■□□□ 1.6
SMARCD1-209ENST00000550477 DPYSL4O14531 572 aa25.05■■□□□ 1.6
SMARCD1-209ENST00000550477 ODC1P11926 461 aa25.05■■□□□ 1.6
SMARCD1-209ENST00000550477 GJB2P29033 226 aa25.05■■□□□ 1.6
SMARCD1-209ENST00000550477 AARSP49588 968 aaKnown RBP eCLIP25.05■■□□□ 1.6
SMARCD1-209ENST00000550477 CCR3P51677 355 aa25.05■■□□□ 1.6
SMARCD1-209ENST00000550477 MLLT6P55198 1093 aaPredicted RBP25.05■■□□□ 1.6
SMARCD1-209ENST00000550477 DUSP4Q13115 394 aa25.05■■□□□ 1.6
SMARCD1-209ENST00000550477 MTAPQ13126 283 aa25.05■■□□□ 1.6
SMARCD1-209ENST00000550477 DHX8Q14562 1220 aaKnown RBP25.05■■□□□ 1.6
SMARCD1-209ENST00000550477 TEAD2Q15562 447 aa25.05■■□□□ 1.6
SMARCD1-209ENST00000550477 ITIH5Q86UX2 942 aa25.05■■□□□ 1.6
SMARCD1-209ENST00000550477 GPBP1Q86WP2 473 aa25.05■■□□□ 1.6
SMARCD1-209ENST00000550477 MSTO1Q9BUK6 570 aa25.05■■□□□ 1.6
SMARCD1-209ENST00000550477 CHRDQ9H2X0 955 aa25.05■■□□□ 1.6
SMARCD1-209ENST00000550477 ZHX3Q9H4I2 956 aa25.05■■□□□ 1.6
SMARCD1-209ENST00000550477 LMAN1LQ9HAT1 526 aa25.05■■□□□ 1.6
SMARCD1-209ENST00000550477 UPF2Q9HAU5 1272 aaKnown RBP25.05■■□□□ 1.6
SMARCD1-209ENST00000550477 PRMT8Q9NR22 394 aaPredicted RBP25.05■■□□□ 1.6
SMARCD1-209ENST00000550477 HEPACAM2A8MVW5 462 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms