RNA–Protein interactions for RNA: ENST00000549963.1

GPN3-206, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 497 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-206ENST00000549963 KCNA5P22460 613 aa16.12■□□□□ 0.17
GPN3-206ENST00000549963 GTF2F1P35269 517 aaKnown RBP eCLIP16.12■□□□□ 0.17
GPN3-206ENST00000549963 VAMP7P51809 220 aa16.12■□□□□ 0.17
GPN3-206ENST00000549963 WNT7BP56706 349 aa16.12■□□□□ 0.17
GPN3-206ENST00000549963 MRPS5P82675 430 aaKnown RBP16.12■□□□□ 0.17
GPN3-206ENST00000549963 YWHAHQ04917 246 aaPredicted RBP16.12■□□□□ 0.17
GPN3-206ENST00000549963 ENPEPQ07075 957 aa16.12■□□□□ 0.17
GPN3-206ENST00000549963 PAK1Q13153 545 aa16.12■□□□□ 0.17
GPN3-206ENST00000549963 BIRC3Q13489 604 aa16.12■□□□□ 0.17
GPN3-206ENST00000549963 PUS10Q3MIT2 529 aaKnown RBP16.12■□□□□ 0.17
GPN3-206ENST00000549963 LMBRD2Q68DH5 695 aaPredicted RBP16.12■□□□□ 0.17
GPN3-206ENST00000549963 LLGL2Q6P1M3 1020 aa16.12■□□□□ 0.17
GPN3-206ENST00000549963 FOXR2Q6PJQ5 311 aa16.12■□□□□ 0.17
GPN3-206ENST00000549963 PRSS55Q6UWB4 352 aaPredicted RBP16.12■□□□□ 0.17
GPN3-206ENST00000549963 TMEM184AQ6ZMB5 413 aa16.12■□□□□ 0.17
GPN3-206ENST00000549963 TRAPPC11Q7Z392 1133 aa16.12■□□□□ 0.17
GPN3-206ENST00000549963 LNX1Q8TBB1 728 aaPredicted RBP16.12■□□□□ 0.17
GPN3-206ENST00000549963 GPT2Q8TD30 523 aa16.12■□□□□ 0.17
GPN3-206ENST00000549963 SYAP1Q96A49 352 aaPredicted RBP16.12■□□□□ 0.17
GPN3-206ENST00000549963 SENP8Q96LD8 212 aa16.12■□□□□ 0.17
GPN3-206ENST00000549963 DZANK1Q9NVP4 752 aa16.12■□□□□ 0.17
GPN3-206ENST00000549963 BACE2Q9Y5Z0 518 aa16.12■□□□□ 0.17
GPN3-206ENST00000549963 SCN1AP35498 2009 aa16.12■□□□□ 0.17
GPN3-206ENST00000549963 CYB561D2O14569 222 aa16.11■□□□□ 0.17
GPN3-206ENST00000549963 HUS1O60921 280 aa16.11■□□□□ 0.17
GPN3-206ENST00000549963 AKAP3O75969 853 aa16.11■□□□□ 0.17
GPN3-206ENST00000549963 CLSTN1O94985 981 aa16.11■□□□□ 0.17
GPN3-206ENST00000549963 GLUD1P00367 558 aa16.11■□□□□ 0.17
GPN3-206ENST00000549963 HOXB8P17481 243 aaPredicted RBP16.11■□□□□ 0.17
GPN3-206ENST00000549963 TYMPP19971 482 aa16.11■□□□□ 0.17
GPN3-206ENST00000549963 BMP6P22004 513 aa16.11■□□□□ 0.17
GPN3-206ENST00000549963 IGFBP6P24592 240 aaPredicted RBP16.11■□□□□ 0.17
GPN3-206ENST00000549963 AARSP49588 968 aaKnown RBP eCLIP16.11■□□□□ 0.17
GPN3-206ENST00000549963 BFSP1Q12934 665 aa16.11■□□□□ 0.17
GPN3-206ENST00000549963 COL19A1Q14993 1142 aa16.11■□□□□ 0.17
GPN3-206ENST00000549963 CTXN3Q4LDR2 81 aa16.11■□□□□ 0.17
GPN3-206ENST00000549963 VARS2Q5ST30 1063 aaKnown RBP16.11■□□□□ 0.17
GPN3-206ENST00000549963 ZNF280DQ6N043 979 aa16.11■□□□□ 0.17
GPN3-206ENST00000549963 PALB2Q86YC2 1186 aa16.11■□□□□ 0.17
GPN3-206ENST00000549963 GLYCTKQ8IVS8 523 aa16.11■□□□□ 0.17
GPN3-206ENST00000549963 THEM5Q8N1Q8 247 aa16.11■□□□□ 0.17
GPN3-206ENST00000549963 OR5B17Q8NGF7 314 aa16.11■□□□□ 0.17
GPN3-206ENST00000549963 HPDLQ96IR7 371 aa16.11■□□□□ 0.17
GPN3-206ENST00000549963 CEP63Q96MT8 703 aa16.11■□□□□ 0.17
GPN3-206ENST00000549963 METTL14Q9HCE5 456 aaKnown RBP16.11■□□□□ 0.17
GPN3-206ENST00000549963 CTNND2Q9UQB3 1225 aa16.11■□□□□ 0.17
GPN3-206ENST00000549963 HCFC2Q9Y5Z7 792 aa16.11■□□□□ 0.17
GPN3-206ENST00000549963 VWA8A3KMH1 1905 aa16.11■□□□□ 0.17
GPN3-206ENST00000549963 MTCL1Q9Y4B5 1905 aaKnown RBP16.1■□□□□ 0.17
GPN3-206ENST00000549963 PPEF2O14830 753 aa16.1■□□□□ 0.17
GPN3-206ENST00000549963 SLC16A3O15427 465 aaKnown RBP16.1■□□□□ 0.17
GPN3-206ENST00000549963 LINC01565O15544 149 aa16.1■□□□□ 0.17
GPN3-206ENST00000549963 CD44P16070 742 aaKnown RBP16.1■□□□□ 0.17
GPN3-206ENST00000549963 ATICP31939 592 aa16.1■□□□□ 0.17
GPN3-206ENST00000549963 OR1D2P34982 312 aa16.1■□□□□ 0.17
GPN3-206ENST00000549963 CLCN4P51793 760 aa16.1■□□□□ 0.17
GPN3-206ENST00000549963 NLRP12P59046 1061 aa16.1■□□□□ 0.17
GPN3-206ENST00000549963 CLDN10P78369 228 aa16.1■□□□□ 0.17
GPN3-206ENST00000549963 TPD52L1Q16890 204 aaPredicted RBP16.1■□□□□ 0.17
GPN3-206ENST00000549963 CCDC183Q5T5S1 534 aa16.1■□□□□ 0.17
GPN3-206ENST00000549963 OVOS1Q6IE37 1185 aa16.1■□□□□ 0.17
GPN3-206ENST00000549963 SASS6Q6UVJ0 657 aa16.1■□□□□ 0.17
GPN3-206ENST00000549963 FILIP1Q7Z7B0 1213 aa16.1■□□□□ 0.17
GPN3-206ENST00000549963 SLC22A17Q8WUG5 538 aa16.1■□□□□ 0.17
GPN3-206ENST00000549963 HDAC7Q8WUI4 952 aa16.1■□□□□ 0.17
GPN3-206ENST00000549963 PLEKHA4Q9H4M7 779 aa16.1■□□□□ 0.17
GPN3-206ENST00000549963 MTRRQ9UBK8 725 aa16.1■□□□□ 0.17
GPN3-206ENST00000549963 CD207Q9UJ71 328 aa16.1■□□□□ 0.17
GPN3-206ENST00000549963 TRIM49BA6NDI0 452 aa16.09■□□□□ 0.17
GPN3-206ENST00000549963 LRRIQ3A6PVS8 624 aaPredicted RBP16.09■□□□□ 0.17
GPN3-206ENST00000549963 OAZ2O95190 189 aa16.09■□□□□ 0.17
GPN3-206ENST00000549963 GNA14O95837 355 aa16.09■□□□□ 0.17
GPN3-206ENST00000549963 RPL17P18621 184 aaKnown RBP16.09■□□□□ 0.17
GPN3-206ENST00000549963 GTF2H1P32780 548 aa16.09■□□□□ 0.17
GPN3-206ENST00000549963 RAB33AQ14088 237 aa16.09■□□□□ 0.17
GPN3-206ENST00000549963 MRPL58Q14197 206 aaKnown RBP16.09■□□□□ 0.17
GPN3-206ENST00000549963 LEXMQ3ZCV2 418 aa16.09■□□□□ 0.17
GPN3-206ENST00000549963 CT47A1Q5JQC4 288 aaPredicted RBP16.09■□□□□ 0.17
GPN3-206ENST00000549963 CES5AQ6NT32 575 aa16.09■□□□□ 0.17
GPN3-206ENST00000549963 ANKRD54Q6NXT1 300 aa16.09■□□□□ 0.17
GPN3-206ENST00000549963 DPH6Q7L8W6 267 aa16.09■□□□□ 0.17
GPN3-206ENST00000549963 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.09■□□□□ 0.17
GPN3-206ENST00000549963 CCDC150Q8NCX0 1101 aa16.09■□□□□ 0.17
GPN3-206ENST00000549963 ZNF516Q92618 1163 aa16.09■□□□□ 0.17
GPN3-206ENST00000549963 EEF2KMTQ96G04 330 aa16.09■□□□□ 0.17
GPN3-206ENST00000549963 CLSTN3Q9BQT9 956 aa16.09■□□□□ 0.17
GPN3-206ENST00000549963 PRDM6Q9NQX0 595 aa16.09■□□□□ 0.17
GPN3-206ENST00000549963 GDAP2Q9NXN4 497 aa16.09■□□□□ 0.17
GPN3-206ENST00000549963 ARMCX3Q9UH62 379 aaPredicted RBP16.09■□□□□ 0.17
GPN3-206ENST00000549963 RWDD2AQ9UIY3 292 aa16.09■□□□□ 0.17
GPN3-206ENST00000549963 TIMM13Q9Y5L4 95 aaPredicted RBP16.09■□□□□ 0.17
GPN3-206ENST00000549963 CDY1Q9Y6F8 540 aa16.09■□□□□ 0.17
GPN3-206ENST00000549963 OR6C75A6NL08 312 aa16.08■□□□□ 0.16
GPN3-206ENST00000549963 SPTLC1O15269 473 aa16.08■□□□□ 0.16
GPN3-206ENST00000549963 CYP11A1P05108 521 aa16.08■□□□□ 0.16
GPN3-206ENST00000549963 EPCAMP16422 314 aa16.08■□□□□ 0.16
GPN3-206ENST00000549963 ELF1P32519 619 aa16.08■□□□□ 0.16
GPN3-206ENST00000549963 LTBRP36941 435 aa16.08■□□□□ 0.16
GPN3-206ENST00000549963 PMS1P54277 932 aaKnown RBP16.08■□□□□ 0.16
GPN3-206ENST00000549963 ARPP19P56211 112 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms