RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 CDHR5Q9HBB8 845 aa20.42■□□□□ 0.86
BRF1-215ENST00000549655 POLIQ9UNA4 740 aa20.42■□□□□ 0.86
BRF1-215ENST00000549655 HAS3O00219 553 aa20.41■□□□□ 0.86
BRF1-215ENST00000549655 FGGP02679 453 aa20.41■□□□□ 0.86
BRF1-215ENST00000549655 ITGB3P05106 788 aa20.41■□□□□ 0.86
BRF1-215ENST00000549655 C2CD6Q53TS8 623 aa20.41■□□□□ 0.86
BRF1-215ENST00000549655 PHLDB2Q86SQ0 1253 aa20.41■□□□□ 0.86
BRF1-215ENST00000549655 UBE2Q2Q8WVN8 375 aa20.41■□□□□ 0.86
BRF1-215ENST00000549655 WNT8AQ9H1J5 351 aa20.41■□□□□ 0.86
BRF1-215ENST00000549655 ABT1Q9ULW3 272 aaKnown RBP20.41■□□□□ 0.86
BRF1-215ENST00000549655 MROH7Q68CQ1 1323 aa20.41■□□□□ 0.86
BRF1-215ENST00000549655 SPOPO43791 374 aa20.41■□□□□ 0.86
BRF1-215ENST00000549655 GLI1P08151 1106 aa20.41■□□□□ 0.86
BRF1-215ENST00000549655 MARCKSL1P49006 195 aa20.41■□□□□ 0.86
BRF1-215ENST00000549655 ADAM17P78536 824 aa20.41■□□□□ 0.86
BRF1-215ENST00000549655 ZNF211Q13398 564 aaPredicted RBP20.41■□□□□ 0.86
BRF1-215ENST00000549655 CASP8Q14790 479 aa20.41■□□□□ 0.86
BRF1-215ENST00000549655 TMEM132DQ14C87 1099 aa20.41■□□□□ 0.86
BRF1-215ENST00000549655 WDR72Q3MJ13 1102 aa20.41■□□□□ 0.86
BRF1-215ENST00000549655 ZNF667Q5HYK9 610 aa20.41■□□□□ 0.86
BRF1-215ENST00000549655 CATSPER4Q7RTX7 472 aa20.41■□□□□ 0.86
BRF1-215ENST00000549655 CPNE8Q86YQ8 564 aa20.41■□□□□ 0.86
BRF1-215ENST00000549655 CXorf38Q8TB03 319 aa20.41■□□□□ 0.86
BRF1-215ENST00000549655 CD101Q93033 1021 aa20.41■□□□□ 0.86
BRF1-215ENST00000549655 ZIC5Q96T25 663 aa20.41■□□□□ 0.86
BRF1-215ENST00000549655 OSMRQ99650 979 aa20.41■□□□□ 0.86
BRF1-215ENST00000549655 C11orf70Q9BRQ4 267 aa20.41■□□□□ 0.86
BRF1-215ENST00000549655 ADAM22Q9P0K1 906 aa20.41■□□□□ 0.86
BRF1-215ENST00000549655 ANAPC7Q9UJX3 599 aa20.41■□□□□ 0.86
BRF1-215ENST00000549655 CCDC188H7C350 402 aa20.4■□□□□ 0.86
BRF1-215ENST00000549655 HEXIM1O94992 359 aaKnown RBP20.4■□□□□ 0.86
BRF1-215ENST00000549655 ITGA4P13612 1032 aa20.4■□□□□ 0.86
BRF1-215ENST00000549655 BRD2P25440 801 aaKnown RBP20.4■□□□□ 0.86
BRF1-215ENST00000549655 HOXA11P31270 313 aaPredicted RBP20.4■□□□□ 0.86
BRF1-215ENST00000549655 YWHAEP62258 255 aaKnown RBP20.4■□□□□ 0.86
BRF1-215ENST00000549655 LIN9Q5TKA1 542 aa20.4■□□□□ 0.86
BRF1-215ENST00000549655 PHF13Q86YI8 300 aaPredicted RBP20.4■□□□□ 0.86
BRF1-215ENST00000549655 PLEKHA4Q9H4M7 779 aa20.4■□□□□ 0.86
BRF1-215ENST00000549655 RAD51CO43502 376 aa20.39■□□□□ 0.86
BRF1-215ENST00000549655 GRM5P41594 1212 aa20.39■□□□□ 0.86
BRF1-215ENST00000549655 TM4SF4P48230 202 aa20.39■□□□□ 0.86
BRF1-215ENST00000549655 PEX5P50542 639 aa20.39■□□□□ 0.86
BRF1-215ENST00000549655 FSCN1Q16658 493 aaKnown RBP20.39■□□□□ 0.86
BRF1-215ENST00000549655 DCAF4L1Q3SXM0 396 aa20.39■□□□□ 0.86
BRF1-215ENST00000549655 PPP1R2P3Q6NXS1 205 aa20.39■□□□□ 0.86
BRF1-215ENST00000549655 LLGL2Q6P1M3 1020 aa20.39■□□□□ 0.86
BRF1-215ENST00000549655 DNAJB3Q8WWF6 145 aa20.39■□□□□ 0.86
BRF1-215ENST00000549655 VCPIP1Q96JH7 1222 aa20.39■□□□□ 0.86
BRF1-215ENST00000549655 BCO2Q9BYV7 579 aa20.39■□□□□ 0.86
BRF1-215ENST00000549655 CITO14578 2027 aa20.39■□□□□ 0.85
BRF1-215ENST00000549655 TREHO43280 583 aa20.39■□□□□ 0.85
BRF1-215ENST00000549655 CA12O43570 354 aa20.39■□□□□ 0.85
BRF1-215ENST00000549655 NPTXRO95502 500 aa20.39■□□□□ 0.85
BRF1-215ENST00000549655 DARSP14868 501 aaKnown RBP20.39■□□□□ 0.85
BRF1-215ENST00000549655 TNFRSF8P28908 595 aa20.39■□□□□ 0.85
BRF1-215ENST00000549655 TNNT3P45378 269 aaPredicted RBP20.39■□□□□ 0.85
BRF1-215ENST00000549655 RAP1GAPP47736 663 aa20.39■□□□□ 0.85
BRF1-215ENST00000549655 ZNF200P98182 395 aaPredicted RBP20.39■□□□□ 0.85
BRF1-215ENST00000549655 GUCY2DQ02846 1103 aa20.39■□□□□ 0.85
BRF1-215ENST00000549655 SMYD5Q6GMV2 418 aa20.39■□□□□ 0.85
BRF1-215ENST00000549655 MMS22LQ6ZRQ5 1243 aa20.39■□□□□ 0.85
BRF1-215ENST00000549655 IFT20Q8IY31 132 aa20.39■□□□□ 0.85
BRF1-215ENST00000549655 AENQ8WTP8 325 aaKnown RBP20.39■□□□□ 0.85
BRF1-215ENST00000549655 NAP1L3Q99457 506 aaPredicted RBP20.39■□□□□ 0.85
BRF1-215ENST00000549655 TRIM7Q9C029 511 aa20.39■□□□□ 0.85
BRF1-215ENST00000549655 C2CD2Q9Y426 696 aa20.39■□□□□ 0.85
BRF1-215ENST00000549655 TRIP12Q14669 1992 aaPredicted RBP20.38■□□□□ 0.85
BRF1-215ENST00000549655 CCDC66A2RUB6 948 aa20.38■□□□□ 0.85
BRF1-215ENST00000549655 DCAF8L1A6NGE4 600 aa20.38■□□□□ 0.85
BRF1-215ENST00000549655 SART1O43290 800 aaKnown RBP20.38■□□□□ 0.85
BRF1-215ENST00000549655 AKR1A1P14550 325 aa20.38■□□□□ 0.85
BRF1-215ENST00000549655 ATICP31939 592 aa20.38■□□□□ 0.85
BRF1-215ENST00000549655 CTNNA1P35221 906 aaKnown RBP20.38■□□□□ 0.85
BRF1-215ENST00000549655 C1QBPQ07021 282 aaKnown RBP20.38■□□□□ 0.85
BRF1-215ENST00000549655 PTP4A2Q12974 167 aa20.38■□□□□ 0.85
BRF1-215ENST00000549655 APBB1IPQ7Z5R6 666 aaPredicted RBP20.38■□□□□ 0.85
BRF1-215ENST00000549655 TFAP2BQ92481 460 aa20.38■□□□□ 0.85
BRF1-215ENST00000549655 FAXDC2Q96IV6 333 aa20.38■□□□□ 0.85
BRF1-215ENST00000549655 KATNAL1Q9BW62 490 aa20.38■□□□□ 0.85
BRF1-215ENST00000549655 DDX47Q9H0S4 455 aaKnown RBP20.38■□□□□ 0.85
BRF1-215ENST00000549655 EPB41L5Q9HCM4 733 aa20.38■□□□□ 0.85
BRF1-215ENST00000549655 GDF3Q9NR23 364 aa20.38■□□□□ 0.85
BRF1-215ENST00000549655 PCDHA3Q9Y5H8 950 aa20.38■□□□□ 0.85
BRF1-215ENST00000549655 ZSCAN5CA6NGD5 496 aaPredicted RBP20.37■□□□□ 0.85
BRF1-215ENST00000549655 LSM8O95777 96 aaKnown RBP20.37■□□□□ 0.85
BRF1-215ENST00000549655 CTNNA2P26232 953 aa20.37■□□□□ 0.85
BRF1-215ENST00000549655 POLR2BP30876 1174 aaKnown RBP20.37■□□□□ 0.85
BRF1-215ENST00000549655 GUCY2FP51841 1108 aa20.37■□□□□ 0.85
BRF1-215ENST00000549655 CDH8P55286 799 aa20.37■□□□□ 0.85
BRF1-215ENST00000549655 CLUL1Q15846 466 aa20.37■□□□□ 0.85
BRF1-215ENST00000549655 AADACL2Q6P093 401 aa20.37■□□□□ 0.85
BRF1-215ENST00000549655 SLC27A1Q6PCB7 646 aa20.37■□□□□ 0.85
BRF1-215ENST00000549655 TRPV1Q8NER1 839 aa20.37■□□□□ 0.85
BRF1-215ENST00000549655 KIF12Q96FN5 646 aa20.37■□□□□ 0.85
BRF1-215ENST00000549655 GDAP1L1Q96MZ0 367 aa20.37■□□□□ 0.85
BRF1-215ENST00000549655 PCNTO95613 3336 aa20.37■□□□□ 0.85
BRF1-215ENST00000549655 A0A0U1RQG5 324 aaPredicted RBP20.37■□□□□ 0.85
BRF1-215ENST00000549655 MYO1FO00160 1098 aa20.37■□□□□ 0.85
BRF1-215ENST00000549655 EIF4BP23588 611 aaKnown RBP20.37■□□□□ 0.85
BRF1-215ENST00000549655 PURAQ00577 322 aaKnown RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms