RNA–Protein interactions for RNA: ENST00000549341.1

DEPDC4-208, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-208ENST00000549341 THAP9Q9H5L6 903 aa7.75□□□□□ -1.17
DEPDC4-208ENST00000549341 ANKEF1Q9NU02 776 aa7.75□□□□□ -1.17
DEPDC4-208ENST00000549341 FANCLQ9NW38 375 aa7.75□□□□□ -1.17
DEPDC4-208ENST00000549341 IFNKQ9P0W0 207 aa7.75□□□□□ -1.17
DEPDC4-208ENST00000549341 DLGAP2Q9P1A6 1054 aa7.75□□□□□ -1.17
DEPDC4-208ENST00000549341 SLC9A2Q9UBY0 812 aa7.75□□□□□ -1.17
DEPDC4-208ENST00000549341 GMEB2Q9UKD1 530 aa7.75□□□□□ -1.17
DEPDC4-208ENST00000549341 ODF2LQ9ULJ1 636 aa7.75□□□□□ -1.17
DEPDC4-208ENST00000549341 INPP5FQ9Y2H2 1132 aa7.75□□□□□ -1.17
DEPDC4-208ENST00000549341 PCDHA10Q9Y5I2 948 aa7.75□□□□□ -1.17
DEPDC4-208ENST00000549341 CLUHO75153 1309 aa7.75□□□□□ -1.17
DEPDC4-208ENST00000549341 LOXHD1Q8IVV2 1947 aa7.74□□□□□ -1.17
DEPDC4-208ENST00000549341 EML1O00423 815 aa7.74□□□□□ -1.17
DEPDC4-208ENST00000549341 C2CD2LO14523 706 aa7.74□□□□□ -1.17
DEPDC4-208ENST00000549341 SLITRK3O94933 977 aa7.74□□□□□ -1.17
DEPDC4-208ENST00000549341 LYPLA2O95372 231 aa7.74□□□□□ -1.17
DEPDC4-208ENST00000549341 GNA14O95837 355 aa7.74□□□□□ -1.17
DEPDC4-208ENST00000549341 SPATA31C1P0DKV0 1188 aa7.74□□□□□ -1.17
DEPDC4-208ENST00000549341 ZSCAN20P17040 1043 aaPredicted RBP7.74□□□□□ -1.17
DEPDC4-208ENST00000549341 CYP11B2P19099 503 aa7.74□□□□□ -1.17
DEPDC4-208ENST00000549341 BMP6P22004 513 aa7.74□□□□□ -1.17
DEPDC4-208ENST00000549341 EEF1GP26641 437 aaKnown RBP7.74□□□□□ -1.17
DEPDC4-208ENST00000549341 STAT5BP51692 787 aa7.74□□□□□ -1.17
DEPDC4-208ENST00000549341 STX17P56962 302 aa7.74□□□□□ -1.17
DEPDC4-208ENST00000549341 ACTR2P61160 394 aa7.74□□□□□ -1.17
DEPDC4-208ENST00000549341 CTTNQ14247 550 aaKnown RBP7.74□□□□□ -1.17
DEPDC4-208ENST00000549341 UBXN2BQ14CS0 331 aa7.74□□□□□ -1.17
DEPDC4-208ENST00000549341 NCAPHQ15003 741 aa7.74□□□□□ -1.17
DEPDC4-208ENST00000549341 FAM160B1Q5W0V3 765 aa7.74□□□□□ -1.17
DEPDC4-208ENST00000549341 ZSCAN30Q86W11 494 aa7.74□□□□□ -1.17
DEPDC4-208ENST00000549341 PPFIBP1Q86W92 1011 aa7.74□□□□□ -1.17
DEPDC4-208ENST00000549341 ECHDC2Q86YB7 292 aa7.74□□□□□ -1.17
DEPDC4-208ENST00000549341 C4orf19Q8IY42 314 aa7.74□□□□□ -1.17
DEPDC4-208ENST00000549341 KIAA0319LQ8IZA0 1049 aa7.74□□□□□ -1.17
DEPDC4-208ENST00000549341 MAML2Q8IZL2 1156 aaPredicted RBP7.74□□□□□ -1.17
DEPDC4-208ENST00000549341 SLC44A3Q8N4M1 653 aa7.74□□□□□ -1.17
DEPDC4-208ENST00000549341 GPR161Q8N6U8 529 aaKnown RBP7.74□□□□□ -1.17
DEPDC4-208ENST00000549341 SPC24Q8NBT2 197 aa7.74□□□□□ -1.17
DEPDC4-208ENST00000549341 CCDC150Q8NCX0 1101 aa7.74□□□□□ -1.17
DEPDC4-208ENST00000549341 SLC22A17Q8WUG5 538 aa7.74□□□□□ -1.17
DEPDC4-208ENST00000549341 GJA10Q969M2 543 aa7.74□□□□□ -1.17
DEPDC4-208ENST00000549341 MYADMQ96S97 322 aa7.74□□□□□ -1.17
DEPDC4-208ENST00000549341 LXNQ9BS40 222 aa7.74□□□□□ -1.17
DEPDC4-208ENST00000549341 EMILIN2Q9BXX0 1053 aa7.74□□□□□ -1.17
DEPDC4-208ENST00000549341 MRPL9Q9BYD2 267 aaKnown RBP7.74□□□□□ -1.17
DEPDC4-208ENST00000549341 BCO2Q9BYV7 579 aa7.74□□□□□ -1.17
DEPDC4-208ENST00000549341 BHMT2Q9H2M3 363 aa7.74□□□□□ -1.17
DEPDC4-208ENST00000549341 ELAC1Q9H777 363 aaKnown RBP7.74□□□□□ -1.17
DEPDC4-208ENST00000549341 PARD6AQ9NPB6 346 aa7.74□□□□□ -1.17
DEPDC4-208ENST00000549341 MAN1C1Q9NR34 630 aa7.74□□□□□ -1.17
DEPDC4-208ENST00000549341 RGL1Q9NZL6 768 aa7.74□□□□□ -1.17
DEPDC4-208ENST00000549341 GDAQ9Y2T3 454 aa7.74□□□□□ -1.17
DEPDC4-208ENST00000549341 PCDHGA2Q9Y5H1 932 aa7.74□□□□□ -1.17
DEPDC4-208ENST00000549341 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.74□□□□□ -1.17
DEPDC4-208ENST00000549341 UBE4BO95155 1302 aa7.74□□□□□ -1.17
DEPDC4-208ENST00000549341 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.73□□□□□ -1.17
DEPDC4-208ENST00000549341 CALUO43852 315 aaPredicted RBP7.73□□□□□ -1.17
DEPDC4-208ENST00000549341 ZIC2O95409 532 aaPredicted RBP7.73□□□□□ -1.17
DEPDC4-208ENST00000549341 CTSAP10619 480 aa7.73□□□□□ -1.17
DEPDC4-208ENST00000549341 ZNF18P17022 549 aa7.73□□□□□ -1.17
DEPDC4-208ENST00000549341 FGFR4P22455 802 aa7.73□□□□□ -1.17
DEPDC4-208ENST00000549341 GUCY2CP25092 1073 aa7.73□□□□□ -1.17
DEPDC4-208ENST00000549341 RPL13P26373 211 aaKnown RBP7.73□□□□□ -1.17
DEPDC4-208ENST00000549341 CLCN3P51790 818 aa7.73□□□□□ -1.17
DEPDC4-208ENST00000549341 CRYBB1P53674 252 aaPredicted RBP7.73□□□□□ -1.17
DEPDC4-208ENST00000549341 RNASELQ05823 741 aaKnown RBP7.73□□□□□ -1.17
DEPDC4-208ENST00000549341 SPEM2Q0P670 501 aa7.73□□□□□ -1.17
DEPDC4-208ENST00000549341 HSP90AA2PQ14568 343 aaPredicted RBP7.73□□□□□ -1.17
DEPDC4-208ENST00000549341 DSC3Q14574 896 aa7.73□□□□□ -1.17
DEPDC4-208ENST00000549341 ECM1Q16610 540 aa7.73□□□□□ -1.17
DEPDC4-208ENST00000549341 PHLDB3Q6NSJ2 640 aa7.73□□□□□ -1.17
DEPDC4-208ENST00000549341 TSSK4Q6SA08 328 aa7.73□□□□□ -1.17
DEPDC4-208ENST00000549341 B3GNT9Q6UX72 402 aa7.73□□□□□ -1.17
DEPDC4-208ENST00000549341 KCNK18Q7Z418 384 aa7.73□□□□□ -1.17
DEPDC4-208ENST00000549341 CREBRFQ8IUR6 639 aa7.73□□□□□ -1.17
DEPDC4-208ENST00000549341 EXOC8Q8IYI6 725 aa7.73□□□□□ -1.17
DEPDC4-208ENST00000549341 SMYD4Q8IYR2 804 aaPredicted RBP7.73□□□□□ -1.17
DEPDC4-208ENST00000549341 CSGALNACT2Q8N6G5 542 aa7.73□□□□□ -1.17
DEPDC4-208ENST00000549341 GOLGA5Q8TBA6 731 aa7.73□□□□□ -1.17
DEPDC4-208ENST00000549341 DNAJC19Q96DA6 116 aa7.73□□□□□ -1.17
DEPDC4-208ENST00000549341 DRC1Q96MC2 740 aa7.73□□□□□ -1.17
DEPDC4-208ENST00000549341 CDK15Q96Q40 435 aa7.73□□□□□ -1.17
DEPDC4-208ENST00000549341 XPO4Q9C0E2 1151 aaKnown RBP7.73□□□□□ -1.17
DEPDC4-208ENST00000549341 MRPL44Q9H9J2 332 aaKnown RBP7.73□□□□□ -1.17
DEPDC4-208ENST00000549341 PARVGQ9HBI0 331 aa7.73□□□□□ -1.17
DEPDC4-208ENST00000549341 SLC39A2Q9NP94 309 aa7.73□□□□□ -1.17
DEPDC4-208ENST00000549341 LARSQ9P2J5 1176 aaKnown RBP7.73□□□□□ -1.17
DEPDC4-208ENST00000549341 ANGPTL2Q9UKU9 493 aa7.73□□□□□ -1.17
DEPDC4-208ENST00000549341 AKT3Q9Y243 479 aa7.73□□□□□ -1.17
DEPDC4-208ENST00000549341 PPME1Q9Y570 386 aa7.73□□□□□ -1.17
DEPDC4-208ENST00000549341 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.73□□□□□ -1.17
DEPDC4-208ENST00000549341 NUMBLQ9Y6R0 609 aa7.73□□□□□ -1.17
DEPDC4-208ENST00000549341 FRMD3A2A2Y4 597 aa7.72□□□□□ -1.17
DEPDC4-208ENST00000549341 KCNJ18B7U540 433 aa7.72□□□□□ -1.17
DEPDC4-208ENST00000549341 H0YCG3 227 aa7.72□□□□□ -1.17
DEPDC4-208ENST00000549341 N4BP3O15049 544 aa7.72□□□□□ -1.17
DEPDC4-208ENST00000549341 CETN3O15182 167 aa7.72□□□□□ -1.17
DEPDC4-208ENST00000549341 INPPL1O15357 1258 aa7.72□□□□□ -1.17
DEPDC4-208ENST00000549341 EIF3DO15371 548 aaKnown RBP eCLIP7.72□□□□□ -1.17
DEPDC4-208ENST00000549341 DHX15O43143 795 aaKnown RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms