RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 CHRDQ9H2X0 955 aa13.05□□□□□ -0.32
TRAFD1-205ENST00000548277 PRMT8Q9NR22 394 aaPredicted RBP13.05□□□□□ -0.32
TRAFD1-205ENST00000548277 ASAH2Q9NR71 780 aa13.05□□□□□ -0.32
TRAFD1-205ENST00000548277 CNTN3Q9P232 1028 aa13.05□□□□□ -0.32
TRAFD1-205ENST00000548277 ARHGAP28Q9P2N2 729 aa13.05□□□□□ -0.32
TRAFD1-205ENST00000548277 AFF4Q9UHB7 1163 aaKnown RBP13.05□□□□□ -0.32
TRAFD1-205ENST00000548277 LIMCH1Q9UPQ0 1083 aa13.05□□□□□ -0.32
TRAFD1-205ENST00000548277 SLC27A5Q9Y2P5 690 aa13.05□□□□□ -0.32
TRAFD1-205ENST00000548277 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.05□□□□□ -0.32
TRAFD1-205ENST00000548277 ZNF292O60281 2723 aa13.05□□□□□ -0.32
TRAFD1-205ENST00000548277 DENND4CQ5VZ89 1909 aa13.05□□□□□ -0.32
TRAFD1-205ENST00000548277 SPAG17Q6Q759 2223 aa13.04□□□□□ -0.32
TRAFD1-205ENST00000548277 NPHP3-ACAD11A0A0J9YXS1 232 aa13.04□□□□□ -0.32
TRAFD1-205ENST00000548277 A0A1W2PRU2 124 aa13.04□□□□□ -0.32
TRAFD1-205ENST00000548277 SLC38A8A6NNN8 435 aa13.04□□□□□ -0.32
TRAFD1-205ENST00000548277 CHURC1-FNTBB4DL54 471 aa13.04□□□□□ -0.32
TRAFD1-205ENST00000548277 SOAT2O75908 522 aa13.04□□□□□ -0.32
TRAFD1-205ENST00000548277 KRT37O76014 449 aa13.04□□□□□ -0.32
TRAFD1-205ENST00000548277 CXCL8P10145 99 aa13.04□□□□□ -0.32
TRAFD1-205ENST00000548277 KCNA4P22459 653 aa13.04□□□□□ -0.32
TRAFD1-205ENST00000548277 TGM1P22735 817 aa13.04□□□□□ -0.32
TRAFD1-205ENST00000548277 PROZP22891 400 aa13.04□□□□□ -0.32
TRAFD1-205ENST00000548277 HOXC13P31276 330 aa13.04□□□□□ -0.32
TRAFD1-205ENST00000548277 CXCL12P48061 93 aa13.04□□□□□ -0.32
TRAFD1-205ENST00000548277 FNTBP49356 437 aa13.04□□□□□ -0.32
TRAFD1-205ENST00000548277 TOB1P50616 345 aaPredicted RBP13.04□□□□□ -0.32
TRAFD1-205ENST00000548277 DMWDQ09019 674 aa13.04□□□□□ -0.32
TRAFD1-205ENST00000548277 DUSP4Q13115 394 aa13.04□□□□□ -0.32
TRAFD1-205ENST00000548277 MAPK7Q13164 816 aa13.04□□□□□ -0.32
TRAFD1-205ENST00000548277 ORC2Q13416 577 aaPredicted RBP13.04□□□□□ -0.32
TRAFD1-205ENST00000548277 STXBP5Q5T5C0 1151 aa13.04□□□□□ -0.32
TRAFD1-205ENST00000548277 DSTYKQ6XUX3 929 aa13.04□□□□□ -0.32
TRAFD1-205ENST00000548277 ZNF687Q8N1G0 1237 aa13.04□□□□□ -0.32
TRAFD1-205ENST00000548277 FBXO18Q8NFZ0 1043 aa13.04□□□□□ -0.32
TRAFD1-205ENST00000548277 SHKBP1Q8TBC3 707 aa13.04□□□□□ -0.32
TRAFD1-205ENST00000548277 RSPRY1Q96DX4 576 aa13.04□□□□□ -0.32
TRAFD1-205ENST00000548277 FAM212AQ96EL1 285 aa13.04□□□□□ -0.32
TRAFD1-205ENST00000548277 KIF12Q96FN5 646 aa13.04□□□□□ -0.32
TRAFD1-205ENST00000548277 BORCS6Q96GS4 357 aa13.04□□□□□ -0.32
TRAFD1-205ENST00000548277 DRC1Q96MC2 740 aa13.04□□□□□ -0.32
TRAFD1-205ENST00000548277 RAB34Q9BZG1 259 aa13.04□□□□□ -0.32
TRAFD1-205ENST00000548277 PCDHB8Q9UN66 801 aa13.04□□□□□ -0.32
TRAFD1-205ENST00000548277 RBM19Q9Y4C8 960 aaKnown RBP13.04□□□□□ -0.32
TRAFD1-205ENST00000548277 NUP210Q8TEM1 1887 aaPredicted RBP13.04□□□□□ -0.32
TRAFD1-205ENST00000548277 PRR5-ARHGAP8B1AHC4 643 aa13.03□□□□□ -0.32
TRAFD1-205ENST00000548277 TULP1O00294 542 aaPredicted RBP13.03□□□□□ -0.32
TRAFD1-205ENST00000548277 CLDN3O15551 220 aa13.03□□□□□ -0.32
TRAFD1-205ENST00000548277 CHRNB1P11230 501 aa13.03□□□□□ -0.32
TRAFD1-205ENST00000548277 TNFSF9P41273 254 aa13.03□□□□□ -0.32
TRAFD1-205ENST00000548277 NRLP54845 237 aa13.03□□□□□ -0.32
TRAFD1-205ENST00000548277 ARHGAP8P85298 464 aa13.03□□□□□ -0.32
TRAFD1-205ENST00000548277 LMNB2Q03252 620 aa13.03□□□□□ -0.32
TRAFD1-205ENST00000548277 YWHAHQ04917 246 aaPredicted RBP13.03□□□□□ -0.32
TRAFD1-205ENST00000548277 SIM2Q14190 667 aaPredicted RBP13.03□□□□□ -0.32
TRAFD1-205ENST00000548277 GAS6Q14393 721 aa13.03□□□□□ -0.32
TRAFD1-205ENST00000548277 NOLC1Q14978 699 aaKnown RBP eCLIP13.03□□□□□ -0.32
TRAFD1-205ENST00000548277 DTHD1Q6ZMT9 781 aa13.03□□□□□ -0.32
TRAFD1-205ENST00000548277 MFSD6LQ8IWD5 586 aa13.03□□□□□ -0.32
TRAFD1-205ENST00000548277 IGSF22Q8N9C0 903 aa13.03□□□□□ -0.32
TRAFD1-205ENST00000548277 BICD1Q96G01 975 aa13.03□□□□□ -0.32
TRAFD1-205ENST00000548277 ZFYVE19Q96K21 471 aa13.03□□□□□ -0.32
TRAFD1-205ENST00000548277 MMTAG2Q9BU76 263 aaKnown RBP13.03□□□□□ -0.32
TRAFD1-205ENST00000548277 HAPLN2Q9GZV7 340 aa13.03□□□□□ -0.32
TRAFD1-205ENST00000548277 CRISPLD1Q9H336 500 aa13.03□□□□□ -0.32
TRAFD1-205ENST00000548277 YIPF1Q9Y548 306 aa13.03□□□□□ -0.32
TRAFD1-205ENST00000548277 EML5Q05BV3 1969 aa13.02□□□□□ -0.32
TRAFD1-205ENST00000548277 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.02□□□□□ -0.33
TRAFD1-205ENST00000548277 DPYSL4O14531 572 aa13.02□□□□□ -0.33
TRAFD1-205ENST00000548277 HRO43593 1189 aa13.02□□□□□ -0.33
TRAFD1-205ENST00000548277 MICAL2O94851 1124 aa13.02□□□□□ -0.33
TRAFD1-205ENST00000548277 VNN2O95498 520 aa13.02□□□□□ -0.33
TRAFD1-205ENST00000548277 TDGF1P13385 188 aa13.02□□□□□ -0.33
TRAFD1-205ENST00000548277 SDHBP21912 280 aa13.02□□□□□ -0.33
TRAFD1-205ENST00000548277 CCR3P51677 355 aa13.02□□□□□ -0.33
TRAFD1-205ENST00000548277 SMTNP53814 917 aa13.02□□□□□ -0.33
TRAFD1-205ENST00000548277 EPHB3P54753 998 aa13.02□□□□□ -0.33
TRAFD1-205ENST00000548277 PPP2R5DQ14738 602 aa13.02□□□□□ -0.33
TRAFD1-205ENST00000548277 USP37Q86T82 979 aa13.02□□□□□ -0.33
TRAFD1-205ENST00000548277 DEPDC1BQ8WUY9 529 aa13.02□□□□□ -0.33
TRAFD1-205ENST00000548277 TMEM209Q96SK2 561 aa13.02□□□□□ -0.33
TRAFD1-205ENST00000548277 LLPHQ9BRT6 129 aaKnown RBP13.02□□□□□ -0.33
TRAFD1-205ENST00000548277 FAM126AQ9BYI3 521 aaPredicted RBP13.02□□□□□ -0.33
TRAFD1-205ENST00000548277 ATXN3LQ9H3M9 355 aa13.02□□□□□ -0.33
TRAFD1-205ENST00000548277 STK24Q9Y6E0 443 aa13.02□□□□□ -0.33
TRAFD1-205ENST00000548277 LACTBL1A8MY62 500 aa13.01□□□□□ -0.33
TRAFD1-205ENST00000548277 PPEF2O14830 753 aa13.01□□□□□ -0.33
TRAFD1-205ENST00000548277 TOM1L1O75674 476 aa13.01□□□□□ -0.33
TRAFD1-205ENST00000548277 PLS3P13797 630 aa13.01□□□□□ -0.33
TRAFD1-205ENST00000548277 ALDH1A3P47895 512 aa13.01□□□□□ -0.33
TRAFD1-205ENST00000548277 TRAPPC10P48553 1259 aa13.01□□□□□ -0.33
TRAFD1-205ENST00000548277 DHX8Q14562 1220 aaKnown RBP13.01□□□□□ -0.33
TRAFD1-205ENST00000548277 PON2Q15165 354 aa13.01□□□□□ -0.33
TRAFD1-205ENST00000548277 MCTP1Q6DN14 999 aa13.01□□□□□ -0.33
TRAFD1-205ENST00000548277 Q6ZS52 159 aa13.01□□□□□ -0.33
TRAFD1-205ENST00000548277 ARID3BQ8IVW6 561 aaPredicted RBP13.01□□□□□ -0.33
TRAFD1-205ENST00000548277 TTC9BQ8N6N2 239 aa13.01□□□□□ -0.33
TRAFD1-205ENST00000548277 CELF5Q8N6W0 485 aaKnown RBP13.01□□□□□ -0.33
TRAFD1-205ENST00000548277 ATAD1Q8NBU5 361 aa13.01□□□□□ -0.33
TRAFD1-205ENST00000548277 TMEM161BQ8NDZ6 487 aa13.01□□□□□ -0.33
TRAFD1-205ENST00000548277 FAM200AQ8TCP9 573 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms