RNA–Protein interactions for RNA: ENST00000547861.5

CCDC65-203, Transcript of coiled-coil domain containing 65, humanhuman

TSL 2

Gene CCDC65, Length 1,746 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-203ENST00000547861 LONRF2Q1L5Z9 754 aa8.67□□□□□ -1.02
CCDC65-203ENST00000547861 PROX2Q3B8N5 592 aa8.67□□□□□ -1.02
CCDC65-203ENST00000547861 ZNF484Q5JVG2 852 aa8.67□□□□□ -1.02
CCDC65-203ENST00000547861 SPOPLQ6IQ16 392 aa8.67□□□□□ -1.02
CCDC65-203ENST00000547861 EFCAB12Q6NXP0 572 aa8.67□□□□□ -1.02
CCDC65-203ENST00000547861 ZBTB33Q86T24 672 aa8.67□□□□□ -1.02
CCDC65-203ENST00000547861 SYCE1Q8N0S2 351 aa8.67□□□□□ -1.02
CCDC65-203ENST00000547861 LINC01465Q8N7H1 131 aa8.67□□□□□ -1.02
CCDC65-203ENST00000547861 SPATA4Q8NEY3 305 aa8.67□□□□□ -1.02
CCDC65-203ENST00000547861 OR5B17Q8NGF7 314 aa8.67□□□□□ -1.02
CCDC65-203ENST00000547861 SLC35G2Q8TBE7 412 aa8.67□□□□□ -1.02
CCDC65-203ENST00000547861 AFG1LQ8WV93 481 aa8.67□□□□□ -1.02
CCDC65-203ENST00000547861 HNRNPLLQ8WVV9 542 aaKnown RBP8.67□□□□□ -1.02
CCDC65-203ENST00000547861 TAF4BQ92750 862 aa8.67□□□□□ -1.02
CCDC65-203ENST00000547861 BADQ92934 168 aa8.67□□□□□ -1.02
CCDC65-203ENST00000547861 ZNF668Q96K58 619 aaPredicted RBP8.67□□□□□ -1.02
CCDC65-203ENST00000547861 FAM161BQ96MY7 647 aa8.67□□□□□ -1.02
CCDC65-203ENST00000547861 ISCUQ9H1K1 167 aa8.67□□□□□ -1.02
CCDC65-203ENST00000547861 RNPEPQ9H4A4 650 aa8.67□□□□□ -1.02
CCDC65-203ENST00000547861 XPNPEP3Q9NQH7 507 aa8.67□□□□□ -1.02
CCDC65-203ENST00000547861 RBM12Q9NTZ6 932 aaKnown RBP8.67□□□□□ -1.02
CCDC65-203ENST00000547861 CDH23Q9H251 3354 aa8.67□□□□□ -1.02
CCDC65-203ENST00000547861 PRUNE2Q8WUY3 3088 aa8.67□□□□□ -1.02
CCDC65-203ENST00000547861 SCN10AQ9Y5Y9 1956 aa8.67□□□□□ -1.02
CCDC65-203ENST00000547861 UMODL1Q5DID0 1318 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 KCNK3O14649 394 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 OGTO15294 1046 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 BUB1BO60566 1050 aaPredicted RBP8.66□□□□□ -1.02
CCDC65-203ENST00000547861 RTN2O75298 545 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 ERLIN1O75477 346 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 PGK1P00558 417 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 CALCAP01258 141 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 CLTAP09496 248 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 KRT5P13647 590 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 INSRRP14616 1297 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 COL9A1P20849 921 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 HADHBP55084 474 aaKnown RBP8.66□□□□□ -1.02
CCDC65-203ENST00000547861 PTENP60484 403 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 NOP14P78316 857 aaKnown RBP8.66□□□□□ -1.02
CCDC65-203ENST00000547861 CDR2Q01850 454 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 TLE2Q04725 743 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 SNX17Q15036 470 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 SHHQ15465 462 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 ZNF568Q3ZCX4 644 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 CFAP221Q4G0U5 840 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 WDR44Q5JSH3 913 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 C9orf50Q5SZB4 431 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 BEND6Q5SZJ8 279 aaPredicted RBP8.66□□□□□ -1.02
CCDC65-203ENST00000547861 EEF1DP3Q658K8 133 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 MPZL3Q6UWV2 235 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 PEX26Q7Z412 305 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 DAAM2Q86T65 1068 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 NT5DC3Q86UY8 548 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 METTL13Q8N6R0 699 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 LMBR1Q8WVP7 490 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 DDX1Q92499 740 aaKnown RBP8.66□□□□□ -1.02
CCDC65-203ENST00000547861 LENG1Q96BZ8 264 aaPredicted RBP8.66□□□□□ -1.02
CCDC65-203ENST00000547861 FAM81BQ96LP2 452 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 MINDY3Q9H8M7 445 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 PRDM16Q9HAZ2 1276 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 APOBEC3GQ9HC16 384 aaKnown RBP8.66□□□□□ -1.02
CCDC65-203ENST00000547861 ABCB6Q9NP58 842 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 RNF14Q9UBS8 474 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 COG5Q9UP83 839 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 VCANP13611 3396 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 TRIM43BA6NCK2 446 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 INO80B-WBP1J3KQ70 363 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 ACKR2O00590 384 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 B4GALT5O43286 388 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 ADCY6O43306 1168 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 ATP8B1O43520 1251 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 FTLP02792 175 aaPredicted RBP8.66□□□□□ -1.02
CCDC65-203ENST00000547861 TUBBP07437 444 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 MMP3P08254 477 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 ZNF865P0CJ78 1059 aaPredicted RBP8.66□□□□□ -1.02
CCDC65-203ENST00000547861 GZMAP12544 262 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 HOXD8P13378 290 aaPredicted RBP8.66□□□□□ -1.02
CCDC65-203ENST00000547861 SMPD1P17405 629 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 CBX1P83916 185 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 CUL2Q13617 745 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 TCEAL1Q15170 157 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 DUSP28Q4G0W2 176 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 ATF7IP2Q5U623 682 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 FAM109BQ6ICB4 259 aaPredicted RBP8.66□□□□□ -1.02
CCDC65-203ENST00000547861 C11orf63Q6NUN7 778 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 TSHZ1Q6ZSZ6 1077 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 RNF180Q86T96 592 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 WDR49Q8IV35 697 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 RHOT2Q8IXI1 618 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 KRT222Q8N1A0 295 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 OR6J1Q8NGC5 347 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 RUBCNQ92622 972 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 TRIM43Q96BQ3 446 aaPredicted RBP8.66□□□□□ -1.02
CCDC65-203ENST00000547861 HES6Q96HZ4 224 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 PBKQ96KB5 322 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 GUCD1Q96NT3 240 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 C16orf70Q9BSU1 422 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 FUT8Q9BYC5 575 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 NFKBIZQ9BYH8 718 aa8.66□□□□□ -1.02
CCDC65-203ENST00000547861 INO80BQ9C086 356 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms