RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 TANGO2Q6ICL3 276 aa14.5□□□□□ -0.09
CPSF6-204ENST00000547486 FRMD5Q7Z6J6 570 aa14.5□□□□□ -0.09
CPSF6-204ENST00000547486 SFR1Q86XK3 245 aa14.5□□□□□ -0.09
CPSF6-204ENST00000547486 KRI1Q8N9T8 703 aaKnown RBP14.5□□□□□ -0.09
CPSF6-204ENST00000547486 BEST2Q8NFU1 509 aa14.5□□□□□ -0.09
CPSF6-204ENST00000547486 DNAJC19Q96DA6 116 aa14.5□□□□□ -0.09
CPSF6-204ENST00000547486 ZSWIM3Q96MP5 696 aa14.5□□□□□ -0.09
CPSF6-204ENST00000547486 STRA6Q9BX79 667 aa14.5□□□□□ -0.09
CPSF6-204ENST00000547486 PANK2Q9BZ23 570 aa14.5□□□□□ -0.09
CPSF6-204ENST00000547486 FOXQ1Q9C009 403 aa14.5□□□□□ -0.09
CPSF6-204ENST00000547486 CRISPLD1Q9H336 500 aa14.5□□□□□ -0.09
CPSF6-204ENST00000547486 ST6GALNAC4Q9H4F1 302 aa14.5□□□□□ -0.09
CPSF6-204ENST00000547486 GDE1Q9NZC3 331 aa14.5□□□□□ -0.09
CPSF6-204ENST00000547486 AFF4Q9UHB7 1163 aaKnown RBP14.5□□□□□ -0.09
CPSF6-204ENST00000547486 SIT1Q9Y3P8 196 aa14.5□□□□□ -0.09
CPSF6-204ENST00000547486 STYXL1Q9Y6J8 313 aa14.5□□□□□ -0.09
CPSF6-204ENST00000547486 A0A087X0B3 334 aa14.49□□□□□ -0.09
CPSF6-204ENST00000547486 PIRO00625 290 aa14.49□□□□□ -0.09
CPSF6-204ENST00000547486 MOSPD3O75425 235 aa14.49□□□□□ -0.09
CPSF6-204ENST00000547486 PPP1R37O75864 691 aa14.49□□□□□ -0.09
CPSF6-204ENST00000547486 ADSSP30520 456 aa14.49□□□□□ -0.09
CPSF6-204ENST00000547486 SLC44A4Q53GD3 710 aa14.49□□□□□ -0.09
CPSF6-204ENST00000547486 RRAGBQ5VZM2 374 aa14.49□□□□□ -0.09
CPSF6-204ENST00000547486 C9orf57Q5W0N0 161 aa14.49□□□□□ -0.09
CPSF6-204ENST00000547486 ADALQ6DHV7 355 aa14.49□□□□□ -0.09
CPSF6-204ENST00000547486 CRELD2Q6UXH1 353 aaPredicted RBP14.49□□□□□ -0.09
CPSF6-204ENST00000547486 DSTYKQ6XUX3 929 aa14.49□□□□□ -0.09
CPSF6-204ENST00000547486 INTS4Q96HW7 963 aaKnown RBP14.49□□□□□ -0.09
CPSF6-204ENST00000547486 PGLYRP2Q96PD5 576 aa14.49□□□□□ -0.09
CPSF6-204ENST00000547486 USP28Q96RU2 1077 aa14.49□□□□□ -0.09
CPSF6-204ENST00000547486 TBC1D7Q9P0N9 293 aa14.49□□□□□ -0.09
CPSF6-204ENST00000547486 CCDC39Q9UFE4 941 aa14.49□□□□□ -0.09
CPSF6-204ENST00000547486 MTF2Q9Y483 593 aaPredicted RBP14.49□□□□□ -0.09
CPSF6-204ENST00000547486 ZFHX2Q9C0A1 2572 aaPredicted RBP14.48□□□□□ -0.09
CPSF6-204ENST00000547486 ANO9A1A5B4 782 aa14.48□□□□□ -0.09
CPSF6-204ENST00000547486 ECI2O75521 394 aa14.48□□□□□ -0.09
CPSF6-204ENST00000547486 MICAL2O94851 1124 aa14.48□□□□□ -0.09
CPSF6-204ENST00000547486 CPB1P15086 417 aa14.48□□□□□ -0.09
CPSF6-204ENST00000547486 GJA1P17302 382 aa14.48□□□□□ -0.09
CPSF6-204ENST00000547486 CD72P21854 359 aa14.48□□□□□ -0.09
CPSF6-204ENST00000547486 RFX1P22670 979 aa14.48□□□□□ -0.09
CPSF6-204ENST00000547486 FCARP24071 287 aa14.48□□□□□ -0.09
CPSF6-204ENST00000547486 SLC39A14Q15043 492 aa14.48□□□□□ -0.09
CPSF6-204ENST00000547486 FAM78AQ5JUQ0 283 aa14.48□□□□□ -0.09
CPSF6-204ENST00000547486 CD302Q8IX05 232 aa14.48□□□□□ -0.09
CPSF6-204ENST00000547486 ZSWIM2Q8NEG5 633 aa14.48□□□□□ -0.09
CPSF6-204ENST00000547486 SENP8Q96LD8 212 aa14.48□□□□□ -0.09
CPSF6-204ENST00000547486 ZNF512Q96ME7 567 aaPredicted RBP14.48□□□□□ -0.09
CPSF6-204ENST00000547486 TSPAN18Q96SJ8 248 aa14.48□□□□□ -0.09
CPSF6-204ENST00000547486 TMEM209Q96SK2 561 aa14.48□□□□□ -0.09
CPSF6-204ENST00000547486 STK17AQ9UEE5 414 aa14.48□□□□□ -0.09
CPSF6-204ENST00000547486 AGO2Q9UKV8 859 aaKnown RBP14.48□□□□□ -0.09
CPSF6-204ENST00000547486 MAFFQ9ULX9 164 aa14.48□□□□□ -0.09
CPSF6-204ENST00000547486 SLC27A5Q9Y2P5 690 aa14.48□□□□□ -0.09
CPSF6-204ENST00000547486 COL4A3Q01955 1670 aa14.48□□□□□ -0.09
CPSF6-204ENST00000547486 DMDP11532 3685 aa14.47□□□□□ -0.09
CPSF6-204ENST00000547486 PRR23AA6NEV1 266 aa14.47□□□□□ -0.09
CPSF6-204ENST00000547486 XPOTO43592 962 aaKnown RBP14.47□□□□□ -0.09
CPSF6-204ENST00000547486 TYMPP19971 482 aa14.47□□□□□ -0.09
CPSF6-204ENST00000547486 ABCD1P33897 745 aa14.47□□□□□ -0.09
CPSF6-204ENST00000547486 CDR1P51861 262 aa14.47□□□□□ -0.09
CPSF6-204ENST00000547486 CASP5P51878 434 aa14.47□□□□□ -0.09
CPSF6-204ENST00000547486 WNT7BP56706 349 aa14.47□□□□□ -0.09
CPSF6-204ENST00000547486 DUSP4Q13115 394 aa14.47□□□□□ -0.09
CPSF6-204ENST00000547486 GPR17Q13304 367 aa14.47□□□□□ -0.09
CPSF6-204ENST00000547486 TMEM132DQ14C87 1099 aa14.47□□□□□ -0.09
CPSF6-204ENST00000547486 MLF2Q15773 248 aaPredicted RBP14.47□□□□□ -0.09
CPSF6-204ENST00000547486 CYP4A22Q5TCH4 519 aa14.47□□□□□ -0.09
CPSF6-204ENST00000547486 OVOS1Q6IE37 1185 aa14.47□□□□□ -0.09
CPSF6-204ENST00000547486 SLFN12LQ6IEE8 588 aa14.47□□□□□ -0.09
CPSF6-204ENST00000547486 PDZD4Q76G19 769 aaPredicted RBP14.47□□□□□ -0.09
CPSF6-204ENST00000547486 SV2BQ7L1I2 683 aa14.47□□□□□ -0.09
CPSF6-204ENST00000547486 USP37Q86T82 979 aa14.47□□□□□ -0.09
CPSF6-204ENST00000547486 PJA1Q8NG27 643 aa14.47□□□□□ -0.09
CPSF6-204ENST00000547486 ELSPBP1Q96BH3 223 aa14.47□□□□□ -0.09
CPSF6-204ENST00000547486 DDX23Q9BUQ8 820 aaKnown RBP14.47□□□□□ -0.09
CPSF6-204ENST00000547486 LRRC3Q9BY71 257 aa14.47□□□□□ -0.09
CPSF6-204ENST00000547486 FGFBP2Q9BYJ0 223 aa14.47□□□□□ -0.09
CPSF6-204ENST00000547486 DNAJC25Q9H1X3 360 aa14.47□□□□□ -0.09
CPSF6-204ENST00000547486 DERAQ9Y315 318 aa14.47□□□□□ -0.09
CPSF6-204ENST00000547486 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.47□□□□□ -0.09
CPSF6-204ENST00000547486 CITO14578 2027 aa14.47□□□□□ -0.09
CPSF6-204ENST00000547486 CFAP54Q96N23 3096 aa14.46□□□□□ -0.09
CPSF6-204ENST00000547486 MYH11P35749 1972 aa14.46□□□□□ -0.09
CPSF6-204ENST00000547486 KANSL1LA0AUZ9 987 aa14.46□□□□□ -0.09
CPSF6-204ENST00000547486 OR6C75A6NL08 312 aa14.46□□□□□ -0.09
CPSF6-204ENST00000547486 SHISA7A6NL88 538 aa14.46□□□□□ -0.09
CPSF6-204ENST00000547486 K7ELQ4 463 aaPredicted RBP14.46□□□□□ -0.09
CPSF6-204ENST00000547486 ZNF197O14709 1029 aa14.46□□□□□ -0.09
CPSF6-204ENST00000547486 STX6O43752 255 aa14.46□□□□□ -0.09
CPSF6-204ENST00000547486 MYL4P12829 197 aa14.46□□□□□ -0.09
CPSF6-204ENST00000547486 EPHA5P54756 1037 aa14.46□□□□□ -0.09
CPSF6-204ENST00000547486 SCARA3Q6AZY7 606 aa14.46□□□□□ -0.09
CPSF6-204ENST00000547486 IQCEQ6IPM2 695 aa14.46□□□□□ -0.09
CPSF6-204ENST00000547486 CENPPQ6IPU0 288 aa14.46□□□□□ -0.09
CPSF6-204ENST00000547486 TTC9BQ8N6N2 239 aa14.46□□□□□ -0.09
CPSF6-204ENST00000547486 ATAD1Q8NBU5 361 aa14.46□□□□□ -0.09
CPSF6-204ENST00000547486 OR10T2Q8NGX3 314 aa14.46□□□□□ -0.09
CPSF6-204ENST00000547486 POMGNT1Q8WZA1 660 aa14.46□□□□□ -0.09
CPSF6-204ENST00000547486 BORCS6Q96GS4 357 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms