RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 USP41Q3LFD5 358 aa24.94■■□□□ 1.58
SMARCD1-203ENST00000547247 CBWD6Q4V339 395 aa24.94■■□□□ 1.58
SMARCD1-203ENST00000547247 CBWD3Q5JTY5 395 aa24.94■■□□□ 1.58
SMARCD1-203ENST00000547247 CBWD5Q5RIA9 395 aa24.94■■□□□ 1.58
SMARCD1-203ENST00000547247 FAM171A1Q5VUB5 890 aa24.94■■□□□ 1.58
SMARCD1-203ENST00000547247 DSTYKQ6XUX3 929 aa24.94■■□□□ 1.58
SMARCD1-203ENST00000547247 FAM200AQ8TCP9 573 aa24.94■■□□□ 1.58
SMARCD1-203ENST00000547247 TLR9Q9NR96 1032 aa24.94■■□□□ 1.58
SMARCD1-203ENST00000547247 KPNA7A9QM74 516 aa24.93■■□□□ 1.58
SMARCD1-203ENST00000547247 LPXNO60711 386 aa24.93■■□□□ 1.58
SMARCD1-203ENST00000547247 N4BP1O75113 896 aaKnown RBP24.93■■□□□ 1.58
SMARCD1-203ENST00000547247 HLA-DRAP01903 254 aa24.93■■□□□ 1.58
SMARCD1-203ENST00000547247 AFPP02771 609 aaKnown RBP24.93■■□□□ 1.58
SMARCD1-203ENST00000547247 ATICP31939 592 aa24.93■■□□□ 1.58
SMARCD1-203ENST00000547247 PIK3CAP42336 1068 aa24.93■■□□□ 1.58
SMARCD1-203ENST00000547247 MYL6P60660 151 aa24.93■■□□□ 1.58
SMARCD1-203ENST00000547247 BMS1Q14692 1282 aaKnown RBP24.93■■□□□ 1.58
SMARCD1-203ENST00000547247 MAN2A1Q16706 1144 aa24.93■■□□□ 1.58
SMARCD1-203ENST00000547247 TAS1R1Q7RTX1 841 aa24.93■■□□□ 1.58
SMARCD1-203ENST00000547247 TAS1R2Q8TE23 839 aa24.93■■□□□ 1.58
SMARCD1-203ENST00000547247 MYLIPQ8WY64 445 aa24.93■■□□□ 1.58
SMARCD1-203ENST00000547247 TUBGCP2Q9BSJ2 902 aa24.93■■□□□ 1.58
SMARCD1-203ENST00000547247 HERC2P3Q9BVR0 1158 aa24.93■■□□□ 1.58
SMARCD1-203ENST00000547247 COL4A4P53420 1690 aaPredicted RBP24.93■■□□□ 1.58
SMARCD1-203ENST00000547247 CDK11BP21127 795 aaKnown RBP24.93■■□□□ 1.58
SMARCD1-203ENST00000547247 TMC7Q7Z402 723 aa24.93■■□□□ 1.58
SMARCD1-203ENST00000547247 FBXL13Q8NEE6 735 aa24.93■■□□□ 1.58
SMARCD1-203ENST00000547247 ANKRD20A12PQ8NF67 263 aa24.93■■□□□ 1.58
SMARCD1-203ENST00000547247 SENP8Q96LD8 212 aa24.93■■□□□ 1.58
SMARCD1-203ENST00000547247 ZBP1Q9H171 429 aa24.93■■□□□ 1.58
SMARCD1-203ENST00000547247 HSD3B7Q9H2F3 369 aa24.93■■□□□ 1.58
SMARCD1-203ENST00000547247 M0QZQ0 153 aa24.92■■□□□ 1.58
SMARCD1-203ENST00000547247 SYN3O14994 580 aa24.92■■□□□ 1.58
SMARCD1-203ENST00000547247 PMM2O15305 246 aa24.92■■□□□ 1.58
SMARCD1-203ENST00000547247 P4HA2O15460 535 aa24.92■■□□□ 1.58
SMARCD1-203ENST00000547247 STAU1O95793 577 aaKnown RBP24.92■■□□□ 1.58
SMARCD1-203ENST00000547247 PRKCSHP14314 528 aaPredicted RBP24.92■■□□□ 1.58
SMARCD1-203ENST00000547247 ZNF18P17022 549 aa24.92■■□□□ 1.58
SMARCD1-203ENST00000547247 ERVFC1P60507 584 aa24.92■■□□□ 1.58
SMARCD1-203ENST00000547247 CAMK1Q14012 370 aa24.92■■□□□ 1.58
SMARCD1-203ENST00000547247 PTPROQ16827 1216 aa24.92■■□□□ 1.58
SMARCD1-203ENST00000547247 SGSM1Q2NKQ1 1148 aa24.92■■□□□ 1.58
SMARCD1-203ENST00000547247 KIAA1841Q6NSI8 718 aa24.92■■□□□ 1.58
SMARCD1-203ENST00000547247 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.92■■□□□ 1.58
SMARCD1-203ENST00000547247 LUZP1Q86V48 1076 aa24.92■■□□□ 1.58
SMARCD1-203ENST00000547247 CEP57Q86XR8 500 aa24.92■■□□□ 1.58
SMARCD1-203ENST00000547247 MICAL1Q8TDZ2 1067 aa24.92■■□□□ 1.58
SMARCD1-203ENST00000547247 TCF25Q9BQ70 676 aa24.92■■□□□ 1.58
SMARCD1-203ENST00000547247 ANP32EQ9BTT0 268 aa24.92■■□□□ 1.58
SMARCD1-203ENST00000547247 TTPALQ9BTX7 342 aa24.92■■□□□ 1.58
SMARCD1-203ENST00000547247 IMPG2Q9BZV3 1241 aa24.92■■□□□ 1.58
SMARCD1-203ENST00000547247 XYLT2Q9H1B5 865 aa24.92■■□□□ 1.58
SMARCD1-203ENST00000547247 ENTPD7Q9NQZ7 604 aa24.92■■□□□ 1.58
SMARCD1-203ENST00000547247 CHST7Q9NS84 486 aa24.92■■□□□ 1.58
SMARCD1-203ENST00000547247 COQ4Q9Y3A0 265 aa24.92■■□□□ 1.58
SMARCD1-203ENST00000547247 ARHGEF37A1IGU5 675 aa24.91■■□□□ 1.58
SMARCD1-203ENST00000547247 CTSAP10619 480 aa24.91■■□□□ 1.58
SMARCD1-203ENST00000547247 FGFR3P22607 806 aa24.91■■□□□ 1.58
SMARCD1-203ENST00000547247 MYL7Q01449 175 aa24.91■■□□□ 1.58
SMARCD1-203ENST00000547247 CETN1Q12798 172 aa24.91■■□□□ 1.58
SMARCD1-203ENST00000547247 ZNF699Q32M78 642 aa24.91■■□□□ 1.58
SMARCD1-203ENST00000547247 PDE12Q6L8Q7 609 aaKnown RBP24.91■■□□□ 1.58
SMARCD1-203ENST00000547247 TAF4BQ92750 862 aa24.91■■□□□ 1.58
SMARCD1-203ENST00000547247 MRPL38Q96DV4 380 aaKnown RBP24.91■■□□□ 1.58
SMARCD1-203ENST00000547247 B3GALT6Q96L58 329 aa24.91■■□□□ 1.58
SMARCD1-203ENST00000547247 VRTNQ9H8Y1 702 aa24.91■■□□□ 1.58
SMARCD1-203ENST00000547247 NGRNQ9NPE2 291 aaKnown RBP24.91■■□□□ 1.58
SMARCD1-203ENST00000547247 RAB20Q9NX57 234 aa24.91■■□□□ 1.58
SMARCD1-203ENST00000547247 GDAP2Q9NXN4 497 aa24.91■■□□□ 1.58
SMARCD1-203ENST00000547247 PCDHB8Q9UN66 801 aa24.91■■□□□ 1.58
SMARCD1-203ENST00000547247 TRANK1O15050 2925 aa24.91■■□□□ 1.58
SMARCD1-203ENST00000547247 CYB561D2O14569 222 aa24.9■■□□□ 1.58
SMARCD1-203ENST00000547247 CLSTN1O94985 981 aa24.9■■□□□ 1.58
SMARCD1-203ENST00000547247 CSPG5O95196 566 aa24.9■■□□□ 1.58
SMARCD1-203ENST00000547247 URODP06132 367 aa24.9■■□□□ 1.58
SMARCD1-203ENST00000547247 ODC1P11926 461 aa24.9■■□□□ 1.58
SMARCD1-203ENST00000547247 TKTP29401 623 aaKnown RBP24.9■■□□□ 1.58
SMARCD1-203ENST00000547247 GLUD2P49448 558 aa24.9■■□□□ 1.58
SMARCD1-203ENST00000547247 TPM4P67936 248 aa24.9■■□□□ 1.58
SMARCD1-203ENST00000547247 KRT31Q15323 416 aa24.9■■□□□ 1.58
SMARCD1-203ENST00000547247 CCDC150Q8NCX0 1101 aa24.9■■□□□ 1.58
SMARCD1-203ENST00000547247 APPL2Q8NEU8 664 aa24.9■■□□□ 1.58
SMARCD1-203ENST00000547247 LMCD1Q9NZU5 365 aa24.9■■□□□ 1.58
SMARCD1-203ENST00000547247 SSX2IPQ9Y2D8 614 aa24.9■■□□□ 1.58
SMARCD1-203ENST00000547247 SNX9Q9Y5X1 595 aa24.9■■□□□ 1.58
SMARCD1-203ENST00000547247 GOLGA6L19H0YKK7 550 aa24.89■■□□□ 1.58
SMARCD1-203ENST00000547247 ASS1P00966 412 aaKnown RBP24.89■■□□□ 1.58
SMARCD1-203ENST00000547247 TPM2P07951 284 aa24.89■■□□□ 1.58
SMARCD1-203ENST00000547247 DSG1Q02413 1049 aa24.89■■□□□ 1.58
SMARCD1-203ENST00000547247 WDR72Q3MJ13 1102 aa24.89■■□□□ 1.58
SMARCD1-203ENST00000547247 VWA3BQ502W6 1294 aa24.89■■□□□ 1.58
SMARCD1-203ENST00000547247 RTP2Q5QGT7 225 aa24.89■■□□□ 1.58
SMARCD1-203ENST00000547247 GPR65Q8IYL9 337 aa24.89■■□□□ 1.58
SMARCD1-203ENST00000547247 GAS2L1Q99501 681 aaPredicted RBP24.89■■□□□ 1.58
SMARCD1-203ENST00000547247 NDST4Q9H3R1 872 aa24.89■■□□□ 1.58
SMARCD1-203ENST00000547247 MRPL17Q9NRX2 175 aaKnown RBP24.89■■□□□ 1.58
SMARCD1-203ENST00000547247 FSCN2O14926 492 aa24.88■■□□□ 1.57
SMARCD1-203ENST00000547247 HUS1O60921 280 aa24.88■■□□□ 1.57
SMARCD1-203ENST00000547247 CXCL14O95715 111 aa24.88■■□□□ 1.57
SMARCD1-203ENST00000547247 IRS1P35568 1242 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms