RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 FNDC1Q4ZHG4 1894 aaPredicted RBP16.99■□□□□ 0.31
TRAFD1-203ENST00000547063 CASTOR2A6NHX0 329 aa16.98■□□□□ 0.31
TRAFD1-203ENST00000547063 KPNA7A9QM74 516 aa16.98■□□□□ 0.31
TRAFD1-203ENST00000547063 TMEM189-UBE2V1I3L0A0 370 aa16.98■□□□□ 0.31
TRAFD1-203ENST00000547063 FAM163BP0C2L3 166 aa16.98■□□□□ 0.31
TRAFD1-203ENST00000547063 STAT1P42224 750 aa16.98■□□□□ 0.31
TRAFD1-203ENST00000547063 FXR1P51114 621 aaKnown RBP eCLIP16.98■□□□□ 0.31
TRAFD1-203ENST00000547063 CLCNKBP51801 687 aa16.98■□□□□ 0.31
TRAFD1-203ENST00000547063 LILRA4P59901 499 aa16.98■□□□□ 0.31
TRAFD1-203ENST00000547063 ARID5BQ14865 1188 aa16.98■□□□□ 0.31
TRAFD1-203ENST00000547063 DRAP1Q14919 205 aaPredicted RBP16.98■□□□□ 0.31
TRAFD1-203ENST00000547063 PDXDC1Q6P996 788 aa16.98■□□□□ 0.31
TRAFD1-203ENST00000547063 RRAGAQ7L523 313 aa16.98■□□□□ 0.31
TRAFD1-203ENST00000547063 DPH6Q7L8W6 267 aa16.98■□□□□ 0.31
TRAFD1-203ENST00000547063 CCDC186Q7Z3E2 898 aa16.98■□□□□ 0.31
TRAFD1-203ENST00000547063 COLGALT2Q8IYK4 626 aa16.98■□□□□ 0.31
TRAFD1-203ENST00000547063 ZNF689Q96CS4 500 aaPredicted RBP16.98■□□□□ 0.31
TRAFD1-203ENST00000547063 PANX2Q96RD6 677 aa16.98■□□□□ 0.31
TRAFD1-203ENST00000547063 DNAJC7Q99615 494 aa16.98■□□□□ 0.31
TRAFD1-203ENST00000547063 BCO2Q9BYV7 579 aa16.98■□□□□ 0.31
TRAFD1-203ENST00000547063 APOBEC3GQ9HC16 384 aaKnown RBP16.98■□□□□ 0.31
TRAFD1-203ENST00000547063 NXF1Q9UBU9 619 aaKnown RBP16.98■□□□□ 0.31
TRAFD1-203ENST00000547063 RBAK-RBAKDNI3L0D1 243 aa16.97■□□□□ 0.31
TRAFD1-203ENST00000547063 TRAPPC3O43617 180 aa16.97■□□□□ 0.31
TRAFD1-203ENST00000547063 HUS1O60921 280 aa16.97■□□□□ 0.31
TRAFD1-203ENST00000547063 LRRN2O75325 713 aa16.97■□□□□ 0.31
TRAFD1-203ENST00000547063 B3GAT3O94766 335 aa16.97■□□□□ 0.31
TRAFD1-203ENST00000547063 ALDH2P05091 517 aa16.97■□□□□ 0.31
TRAFD1-203ENST00000547063 EPHB4P54760 987 aa16.97■□□□□ 0.31
TRAFD1-203ENST00000547063 ADKP55263 362 aaKnown RBP16.97■□□□□ 0.31
TRAFD1-203ENST00000547063 JAM2P57087 298 aa16.97■□□□□ 0.31
TRAFD1-203ENST00000547063 APBA1Q02410 837 aa16.97■□□□□ 0.31
TRAFD1-203ENST00000547063 ARHGAP44Q17R89 818 aa16.97■□□□□ 0.31
TRAFD1-203ENST00000547063 SFMBT2Q5VUG0 894 aa16.97■□□□□ 0.31
TRAFD1-203ENST00000547063 SPOPLQ6IQ16 392 aa16.97■□□□□ 0.31
TRAFD1-203ENST00000547063 ZNF280BQ86YH2 543 aa16.97■□□□□ 0.31
TRAFD1-203ENST00000547063 SHC3Q92529 594 aa16.97■□□□□ 0.31
TRAFD1-203ENST00000547063 BAP1Q92560 729 aa16.97■□□□□ 0.31
TRAFD1-203ENST00000547063 MMS19Q96T76 1030 aa16.97■□□□□ 0.31
TRAFD1-203ENST00000547063 YME1L1Q96TA2 773 aa16.97■□□□□ 0.31
TRAFD1-203ENST00000547063 ZBED2Q9BTP6 218 aa16.97■□□□□ 0.31
TRAFD1-203ENST00000547063 COLEC11Q9BWP8 271 aa16.97■□□□□ 0.31
TRAFD1-203ENST00000547063 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.97■□□□□ 0.312e-6■■■■■ 41.9
TRAFD1-203ENST00000547063 ABHD10Q9NUJ1 306 aa16.97■□□□□ 0.31
TRAFD1-203ENST00000547063 SCN1AP35498 2009 aa16.96■□□□□ 0.31
TRAFD1-203ENST00000547063 LRRC53A6NM62 1247 aa16.96■□□□□ 0.31
TRAFD1-203ENST00000547063 F8VZ95 297 aa16.96■□□□□ 0.31
TRAFD1-203ENST00000547063 PPEF2O14830 753 aa16.96■□□□□ 0.31
TRAFD1-203ENST00000547063 DDHD2O94830 711 aa16.96■□□□□ 0.31
TRAFD1-203ENST00000547063 GJB5O95377 273 aa16.96■□□□□ 0.31
TRAFD1-203ENST00000547063 FERP16591 822 aa16.96■□□□□ 0.31
TRAFD1-203ENST00000547063 HNRNPH3P31942 346 aaKnown RBP16.96■□□□□ 0.31
TRAFD1-203ENST00000547063 SOX5P35711 763 aa16.96■□□□□ 0.31
TRAFD1-203ENST00000547063 ASPAP45381 313 aa16.96■□□□□ 0.31
TRAFD1-203ENST00000547063 OR1G1P47890 313 aa16.96■□□□□ 0.31
TRAFD1-203ENST00000547063 BPIFB4P59827 614 aa16.96■□□□□ 0.31
TRAFD1-203ENST00000547063 BTG3Q14201 252 aaPredicted RBP16.96■□□□□ 0.31
TRAFD1-203ENST00000547063 GJB7Q6PEY0 223 aa16.96■□□□□ 0.31
TRAFD1-203ENST00000547063 TC2NQ8N9U0 490 aa16.96■□□□□ 0.31
TRAFD1-203ENST00000547063 CCDC112Q8NEF3 446 aa16.96■□□□□ 0.31
TRAFD1-203ENST00000547063 KREMEN1Q96MU8 473 aa16.96■□□□□ 0.31
TRAFD1-203ENST00000547063 NRDE2Q9H7Z3 1164 aa16.96■□□□□ 0.31
TRAFD1-203ENST00000547063 AIPL1Q9NZN9 384 aa16.96■□□□□ 0.31
TRAFD1-203ENST00000547063 FAN1Q9Y2M0 1017 aa16.96■□□□□ 0.31
TRAFD1-203ENST00000547063 INSL6Q9Y581 213 aa16.96■□□□□ 0.31
TRAFD1-203ENST00000547063 SNX9Q9Y5X1 595 aa16.96■□□□□ 0.31
TRAFD1-203ENST00000547063 BZW2Q9Y6E2 419 aaKnown RBP16.96■□□□□ 0.31
TRAFD1-203ENST00000547063 ATP2A2P16615 1042 aaKnown RBP16.95■□□□□ 0.3
TRAFD1-203ENST00000547063 MAGEA10P43363 369 aaPredicted RBP16.95■□□□□ 0.3
TRAFD1-203ENST00000547063 ALDH7A1P49419 539 aaKnown RBP16.95■□□□□ 0.3
TRAFD1-203ENST00000547063 AARSP49588 968 aaKnown RBP eCLIP16.95■□□□□ 0.3
TRAFD1-203ENST00000547063 GATMP50440 423 aa16.95■□□□□ 0.3
TRAFD1-203ENST00000547063 ELAVL2Q12926 359 aaKnown RBP16.95■□□□□ 0.3
TRAFD1-203ENST00000547063 PAN2Q504Q3 1202 aaKnown RBP16.95■□□□□ 0.3
TRAFD1-203ENST00000547063 FAM117BQ6P1L5 589 aa16.95■□□□□ 0.3
TRAFD1-203ENST00000547063 DSTYKQ6XUX3 929 aa16.95■□□□□ 0.3
TRAFD1-203ENST00000547063 TMEM86AQ8N2M4 240 aa16.95■□□□□ 0.3
TRAFD1-203ENST00000547063 TOP6BLQ8N6T0 577 aa16.95■□□□□ 0.3
TRAFD1-203ENST00000547063 APPL2Q8NEU8 664 aa16.95■□□□□ 0.3
TRAFD1-203ENST00000547063 SPATA18Q8TC71 538 aa16.95■□□□□ 0.3
TRAFD1-203ENST00000547063 RC3H2Q9HBD1 1191 aaKnown RBP16.95■□□□□ 0.3
TRAFD1-203ENST00000547063 AAASQ9NRG9 546 aa16.95■□□□□ 0.3
TRAFD1-203ENST00000547063 DSEQ9UL01 958 aa16.95■□□□□ 0.3
TRAFD1-203ENST00000547063 RNF225M0QZC1 329 aaPredicted RBP16.94■□□□□ 0.3
TRAFD1-203ENST00000547063 FOXN3O00409 490 aaPredicted RBP16.94■□□□□ 0.3
TRAFD1-203ENST00000547063 TACC1O75410 805 aa16.94■□□□□ 0.3
TRAFD1-203ENST00000547063 ODC1P11926 461 aa16.94■□□□□ 0.3
TRAFD1-203ENST00000547063 LAG3P18627 525 aa16.94■□□□□ 0.3
TRAFD1-203ENST00000547063 USP8P40818 1118 aa16.94■□□□□ 0.3
TRAFD1-203ENST00000547063 HTRA4P83105 476 aaPredicted RBP16.94■□□□□ 0.3
TRAFD1-203ENST00000547063 CDK17Q00537 523 aa16.94■□□□□ 0.3
TRAFD1-203ENST00000547063 ASIC2Q16515 512 aa16.94■□□□□ 0.3
TRAFD1-203ENST00000547063 SPOUT1Q5T280 376 aaKnown RBP16.94■□□□□ 0.3
TRAFD1-203ENST00000547063 RASIP1Q5U651 963 aa16.94■□□□□ 0.3
TRAFD1-203ENST00000547063 SCARA5Q6ZMJ2 495 aa16.94■□□□□ 0.3
TRAFD1-203ENST00000547063 HERC6Q8IVU3 1022 aa16.94■□□□□ 0.3
TRAFD1-203ENST00000547063 FAM71AQ8IYT1 594 aa16.94■□□□□ 0.3
TRAFD1-203ENST00000547063 SENP8Q96LD8 212 aa16.94■□□□□ 0.3
TRAFD1-203ENST00000547063 RAD9AQ99638 391 aa16.94■□□□□ 0.3
TRAFD1-203ENST00000547063 CISHQ9NSE2 258 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms