RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 RBM23Q86U06 439 aaKnown RBP15.61■□□□□ 0.09
DDX54-203ENST00000546869 CEP57Q86XR8 500 aa15.61■□□□□ 0.09
DDX54-203ENST00000546869 FAM186BQ8IYM0 893 aa15.61■□□□□ 0.09
DDX54-203ENST00000546869 SLC22A17Q8WUG5 538 aa15.61■□□□□ 0.09
DDX54-203ENST00000546869 HDAC7Q8WUI4 952 aa15.61■□□□□ 0.09
DDX54-203ENST00000546869 B3GALT6Q96L58 329 aa15.61■□□□□ 0.09
DDX54-203ENST00000546869 SENP8Q96LD8 212 aa15.61■□□□□ 0.09
DDX54-203ENST00000546869 DUSP9Q99956 384 aaKnown RBP15.61■□□□□ 0.09
DDX54-203ENST00000546869 CLSTN3Q9BQT9 956 aa15.61■□□□□ 0.09
DDX54-203ENST00000546869 GDAP2Q9NXN4 497 aa15.61■□□□□ 0.09
DDX54-203ENST00000546869 MTRRQ9UBK8 725 aa15.61■□□□□ 0.09
DDX54-203ENST00000546869 RWDD2AQ9UIY3 292 aa15.61■□□□□ 0.09
DDX54-203ENST00000546869 AGAP1Q9UPQ3 857 aa15.61■□□□□ 0.09
DDX54-203ENST00000546869 TRIM49BA6NDI0 452 aa15.6■□□□□ 0.09
DDX54-203ENST00000546869 PER2O15055 1255 aa15.6■□□□□ 0.09
DDX54-203ENST00000546869 C4BPAP04003 597 aaKnown RBP15.6■□□□□ 0.09
DDX54-203ENST00000546869 FAM163BP0C2L3 166 aa15.6■□□□□ 0.09
DDX54-203ENST00000546869 SRGAP2BP0DMP2 458 aa15.6■□□□□ 0.09
DDX54-203ENST00000546869 EPB41P11171 864 aaKnown RBP15.6■□□□□ 0.09
DDX54-203ENST00000546869 KRT13P13646 458 aa15.6■□□□□ 0.09
DDX54-203ENST00000546869 KLRC2P26717 231 aa15.6■□□□□ 0.09
DDX54-203ENST00000546869 ERCC5P28715 1186 aaPredicted RBP15.6■□□□□ 0.09
DDX54-203ENST00000546869 POLR2BP30876 1174 aaKnown RBP15.6■□□□□ 0.09
DDX54-203ENST00000546869 GTF2H1P32780 548 aa15.6■□□□□ 0.09
DDX54-203ENST00000546869 GTF2F1P35269 517 aaKnown RBP eCLIP15.6■□□□□ 0.09
DDX54-203ENST00000546869 LTBRP36941 435 aa15.6■□□□□ 0.09
DDX54-203ENST00000546869 CLCN4P51793 760 aa15.6■□□□□ 0.09
DDX54-203ENST00000546869 BFSP1Q12934 665 aa15.6■□□□□ 0.09
DDX54-203ENST00000546869 MYO1EQ12965 1108 aa15.6■□□□□ 0.09
DDX54-203ENST00000546869 PSMD5Q16401 504 aa15.6■□□□□ 0.09
DDX54-203ENST00000546869 C1orf220Q5T0J3 134 aa15.6■□□□□ 0.09
DDX54-203ENST00000546869 CCDC183Q5T5S1 534 aa15.6■□□□□ 0.09
DDX54-203ENST00000546869 LMBRD2Q68DH5 695 aaPredicted RBP15.6■□□□□ 0.09
DDX54-203ENST00000546869 SLC8B1Q6J4K2 584 aa15.6■□□□□ 0.09
DDX54-203ENST00000546869 LILRA6Q6PI73 481 aa15.6■□□□□ 0.09
DDX54-203ENST00000546869 DSTYKQ6XUX3 929 aa15.6■□□□□ 0.09
DDX54-203ENST00000546869 C15orf39Q6ZRI6 1047 aa15.6■□□□□ 0.09
DDX54-203ENST00000546869 DPH6Q7L8W6 267 aa15.6■□□□□ 0.09
DDX54-203ENST00000546869 TMEM130Q8N3G9 435 aa15.6■□□□□ 0.09
DDX54-203ENST00000546869 SPATA18Q8TC71 538 aa15.6■□□□□ 0.09
DDX54-203ENST00000546869 IGFLR1Q9H665 355 aa15.6■□□□□ 0.09
DDX54-203ENST00000546869 UBE2ZQ9H832 354 aaPredicted RBP15.6■□□□□ 0.09
DDX54-203ENST00000546869 METTL14Q9HCE5 456 aaKnown RBP15.6■□□□□ 0.09
DDX54-203ENST00000546869 DPP7Q9UHL4 492 aa15.6■□□□□ 0.09
DDX54-203ENST00000546869 DACH1Q9UI36 760 aa15.6■□□□□ 0.09
DDX54-203ENST00000546869 DSEQ9UL01 958 aa15.6■□□□□ 0.09
DDX54-203ENST00000546869 R3HCC1Q9Y3T6 440 aaKnown RBP15.6■□□□□ 0.09
DDX54-203ENST00000546869 I3L4J1 428 aa15.59■□□□□ 0.09
DDX54-203ENST00000546869 C2CD2LO14523 706 aa15.59■□□□□ 0.09
DDX54-203ENST00000546869 STX10O60499 249 aa15.59■□□□□ 0.09
DDX54-203ENST00000546869 CSPG5O95196 566 aa15.59■□□□□ 0.09
DDX54-203ENST00000546869 FGFR1OPO95684 399 aaKnown RBP15.59■□□□□ 0.09
DDX54-203ENST00000546869 GNA14O95837 355 aa15.59■□□□□ 0.09
DDX54-203ENST00000546869 CST3P01034 146 aaPredicted RBP15.59■□□□□ 0.09
DDX54-203ENST00000546869 ODC1P11926 461 aa15.59■□□□□ 0.09
DDX54-203ENST00000546869 ATICP31939 592 aa15.59■□□□□ 0.09
DDX54-203ENST00000546869 DLG4P78352 724 aa15.59■□□□□ 0.09
DDX54-203ENST00000546869 RAB33AQ14088 237 aa15.59■□□□□ 0.09
DDX54-203ENST00000546869 SKIV2LQ15477 1246 aaKnown RBP15.59■□□□□ 0.09
DDX54-203ENST00000546869 ZACNQ401N2 412 aa15.59■□□□□ 0.09
DDX54-203ENST00000546869 VARS2Q5ST30 1063 aaKnown RBP15.59■□□□□ 0.09
DDX54-203ENST00000546869 KLHL10Q6JEL2 608 aa15.59■□□□□ 0.09
DDX54-203ENST00000546869 PRSS55Q6UWB4 352 aaPredicted RBP15.59■□□□□ 0.09
DDX54-203ENST00000546869 LIMS2Q7Z4I7 341 aa15.59■□□□□ 0.09
DDX54-203ENST00000546869 FRMD5Q7Z6J6 570 aa15.59■□□□□ 0.09
DDX54-203ENST00000546869 CASP10Q92851 521 aa15.59■□□□□ 0.09
DDX54-203ENST00000546869 VRTNQ9H8Y1 702 aa15.59■□□□□ 0.09
DDX54-203ENST00000546869 CLEC1BQ9P126 229 aa15.59■□□□□ 0.09
DDX54-203ENST00000546869 MAFFQ9ULX9 164 aa15.59■□□□□ 0.09
DDX54-203ENST00000546869 HCFC2Q9Y5Z7 792 aa15.59■□□□□ 0.09
DDX54-203ENST00000546869 MYO7AQ13402 2215 aa15.58■□□□□ 0.08
DDX54-203ENST00000546869 CYB561D2O14569 222 aa15.58■□□□□ 0.08
DDX54-203ENST00000546869 PAPLNO95428 1278 aa15.58■□□□□ 0.08
DDX54-203ENST00000546869 GLP2RO95838 553 aa15.58■□□□□ 0.08
DDX54-203ENST00000546869 KRT19P08727 400 aa15.58■□□□□ 0.08
DDX54-203ENST00000546869 HOXB8P17481 243 aaPredicted RBP15.58■□□□□ 0.08
DDX54-203ENST00000546869 CA8P35219 290 aa15.58■□□□□ 0.08
DDX54-203ENST00000546869 MARSP56192 900 aaKnown RBP15.58■□□□□ 0.08
DDX54-203ENST00000546869 AAK1Q2M2I8 961 aa15.58■□□□□ 0.08
DDX54-203ENST00000546869 KLHL40Q2TBA0 621 aa15.58■□□□□ 0.08
DDX54-203ENST00000546869 LEXMQ3ZCV2 418 aa15.58■□□□□ 0.08
DDX54-203ENST00000546869 SV2AQ7L0J3 742 aa15.58■□□□□ 0.08
DDX54-203ENST00000546869 RTL10Q7L3V2 364 aa15.58■□□□□ 0.08
DDX54-203ENST00000546869 TMEM86AQ8N2M4 240 aa15.58■□□□□ 0.08
DDX54-203ENST00000546869 TOP6BLQ8N6T0 577 aa15.58■□□□□ 0.08
DDX54-203ENST00000546869 VN1R2Q8NFZ6 395 aa15.58■□□□□ 0.08
DDX54-203ENST00000546869 ATXN2LQ8WWM7 1075 aaKnown RBP15.58■□□□□ 0.08
DDX54-203ENST00000546869 TAF4BQ92750 862 aa15.58■□□□□ 0.08
DDX54-203ENST00000546869 HPDLQ96IR7 371 aa15.58■□□□□ 0.08
DDX54-203ENST00000546869 MSLNLQ96KJ4 702 aa15.58■□□□□ 0.08
DDX54-203ENST00000546869 PLEKHA4Q9H4M7 779 aa15.58■□□□□ 0.08
DDX54-203ENST00000546869 DZANK1Q9NVP4 752 aa15.58■□□□□ 0.08
DDX54-203ENST00000546869 CLDND1Q9NY35 253 aa15.58■□□□□ 0.08
DDX54-203ENST00000546869 CTNND2Q9UQB3 1225 aa15.58■□□□□ 0.08
DDX54-203ENST00000546869 ATG2AQ2TAZ0 1938 aa15.58■□□□□ 0.08
DDX54-203ENST00000546869 PMM2O15305 246 aa15.57■□□□□ 0.08
DDX54-203ENST00000546869 LINC01565O15544 149 aa15.57■□□□□ 0.08
DDX54-203ENST00000546869 ABLIM3O94929 683 aa15.57■□□□□ 0.08
DDX54-203ENST00000546869 YWHAHQ04917 246 aaPredicted RBP15.57■□□□□ 0.08
DDX54-203ENST00000546869 TRPC3Q13507 836 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms