RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 TNFRSF21O75509 655 aa6.94□□□□□ -1.3
PRKDC-211ENST00000546304 BAIAP3O94812 1187 aa6.94□□□□□ -1.3
PRKDC-211ENST00000546304 GCNT3O95395 438 aa6.94□□□□□ -1.3
PRKDC-211ENST00000546304 RPN1P04843 607 aaKnown RBP6.94□□□□□ -1.3
PRKDC-211ENST00000546304 EDN1P05305 212 aa6.94□□□□□ -1.3
PRKDC-211ENST00000546304 ACRP10323 421 aa6.94□□□□□ -1.3
PRKDC-211ENST00000546304 ACTN1P12814 892 aa6.94□□□□□ -1.3
PRKDC-211ENST00000546304 NMT1P30419 496 aaKnown RBP6.94□□□□□ -1.3
PRKDC-211ENST00000546304 ABCD1P33897 745 aa6.94□□□□□ -1.3
PRKDC-211ENST00000546304 CASP5P51878 434 aa6.94□□□□□ -1.3
PRKDC-211ENST00000546304 STRN3Q13033 797 aa6.94□□□□□ -1.3
PRKDC-211ENST00000546304 PRPF4BQ13523 1007 aaKnown RBP6.94□□□□□ -1.3
PRKDC-211ENST00000546304 ALCAMQ13740 583 aa6.94□□□□□ -1.3
PRKDC-211ENST00000546304 FAM187BQ17R55 369 aa6.94□□□□□ -1.3
PRKDC-211ENST00000546304 RSPO4Q2I0M5 234 aaPredicted RBP6.94□□□□□ -1.3
PRKDC-211ENST00000546304 TCTN1Q2MV58 587 aa6.94□□□□□ -1.3
PRKDC-211ENST00000546304 HERC4Q5GLZ8 1057 aaPredicted RBP6.94□□□□□ -1.3
PRKDC-211ENST00000546304 NKAPLQ5M9Q1 402 aa6.94□□□□□ -1.3
PRKDC-211ENST00000546304 NOTUMQ6P988 496 aa6.94□□□□□ -1.3
PRKDC-211ENST00000546304 HAUS6Q7Z4H7 955 aa6.94□□□□□ -1.3
PRKDC-211ENST00000546304 ELOA2Q8IYF1 753 aaPredicted RBP6.94□□□□□ -1.3
PRKDC-211ENST00000546304 RPUSD2Q8IZ73 545 aaKnown RBP6.94□□□□□ -1.3
PRKDC-211ENST00000546304 DBF4BQ8NFT6 615 aa6.94□□□□□ -1.3
PRKDC-211ENST00000546304 KCNN1Q92952 543 aa6.94□□□□□ -1.3
PRKDC-211ENST00000546304 HPS3Q969F9 1004 aa6.94□□□□□ -1.3
PRKDC-211ENST00000546304 HVCN1Q96D96 273 aa6.94□□□□□ -1.3
PRKDC-211ENST00000546304 CCDC51Q96ER9 411 aa6.94□□□□□ -1.3
PRKDC-211ENST00000546304 GDF15Q99988 308 aa6.94□□□□□ -1.3
PRKDC-211ENST00000546304 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.94□□□□□ -1.3
PRKDC-211ENST00000546304 FTHL17Q9BXU8 183 aa6.94□□□□□ -1.3
PRKDC-211ENST00000546304 MRPL4Q9BYD3 311 aaKnown RBP6.94□□□□□ -1.3
PRKDC-211ENST00000546304 FGFBP2Q9BYJ0 223 aa6.94□□□□□ -1.3
PRKDC-211ENST00000546304 NUP62CLQ9H1M0 184 aa6.94□□□□□ -1.3
PRKDC-211ENST00000546304 MTIF3Q9H2K0 278 aaKnown RBP6.94□□□□□ -1.3
PRKDC-211ENST00000546304 TMX1Q9H3N1 280 aa6.94□□□□□ -1.3
PRKDC-211ENST00000546304 CLSTN2Q9H4D0 955 aa6.94□□□□□ -1.3
PRKDC-211ENST00000546304 ST6GALNAC4Q9H4F1 302 aa6.94□□□□□ -1.3
PRKDC-211ENST00000546304 TBC1D7Q9P0N9 293 aa6.94□□□□□ -1.3
PRKDC-211ENST00000546304 KANSL3Q9P2N6 904 aa6.94□□□□□ -1.3
PRKDC-211ENST00000546304 KCNG1Q9UIX4 513 aa6.94□□□□□ -1.3
PRKDC-211ENST00000546304 ST3GAL5Q9UNP4 418 aa6.94□□□□□ -1.3
PRKDC-211ENST00000546304 UBE4BO95155 1302 aa6.94□□□□□ -1.3
PRKDC-211ENST00000546304 ZMYM2Q9UBW7 1377 aa6.94□□□□□ -1.3
PRKDC-211ENST00000546304 MYO9BQ13459 2157 aa6.93□□□□□ -1.3
PRKDC-211ENST00000546304 LOC100996750A0A140TA64 210 aa6.93□□□□□ -1.3
PRKDC-211ENST00000546304 ACKR2O00590 384 aa6.93□□□□□ -1.3
PRKDC-211ENST00000546304 EIF3DO15371 548 aaKnown RBP eCLIP6.93□□□□□ -1.3
PRKDC-211ENST00000546304 MGEA5O60502 916 aa6.93□□□□□ -1.3
PRKDC-211ENST00000546304 EFCAB14O75071 495 aa6.93□□□□□ -1.3
PRKDC-211ENST00000546304 RHOBTB3O94955 611 aa6.93□□□□□ -1.3
PRKDC-211ENST00000546304 SMC2O95347 1197 aa6.93□□□□□ -1.3
PRKDC-211ENST00000546304 MYBP10242 640 aa6.93□□□□□ -1.3
PRKDC-211ENST00000546304 ARF4P18085 180 aaPredicted RBP6.93□□□□□ -1.3
PRKDC-211ENST00000546304 PTMSP20962 102 aa6.93□□□□□ -1.3
PRKDC-211ENST00000546304 AXLP30530 894 aa6.93□□□□□ -1.3
PRKDC-211ENST00000546304 SERPINB4P48594 390 aa6.93□□□□□ -1.3
PRKDC-211ENST00000546304 WDR5P61964 334 aaKnown RBP6.93□□□□□ -1.3
PRKDC-211ENST00000546304 KCNB1Q14721 858 aa6.93□□□□□ -1.3
PRKDC-211ENST00000546304 ZC2HC1CQ53FD0 456 aaPredicted RBP6.93□□□□□ -1.3
PRKDC-211ENST00000546304 TMEM240Q5SV17 173 aa6.93□□□□□ -1.3
PRKDC-211ENST00000546304 TWF2Q6IBS0 349 aaKnown RBP6.93□□□□□ -1.3
PRKDC-211ENST00000546304 FAM43BQ6ZT52 329 aaPredicted RBP6.93□□□□□ -1.3
PRKDC-211ENST00000546304 STXBP4Q6ZWJ1 553 aa6.93□□□□□ -1.3
PRKDC-211ENST00000546304 ZNF365Q70YC5 407 aa6.93□□□□□ -1.3
PRKDC-211ENST00000546304 OTOP2Q7RTS6 562 aa6.93□□□□□ -1.3
PRKDC-211ENST00000546304 KIAA0895Q8NCT3 520 aa6.93□□□□□ -1.3
PRKDC-211ENST00000546304 GLIS3Q8NEA6 775 aa6.93□□□□□ -1.3
PRKDC-211ENST00000546304 SPATA20Q8TB22 786 aa6.93□□□□□ -1.3
PRKDC-211ENST00000546304 ERCC4Q92889 916 aaPredicted RBP6.93□□□□□ -1.3
PRKDC-211ENST00000546304 SMARCE1Q969G3 411 aa6.93□□□□□ -1.3
PRKDC-211ENST00000546304 CCDC47Q96A33 483 aaKnown RBP6.93□□□□□ -1.3
PRKDC-211ENST00000546304 BICD1Q96G01 975 aa6.93□□□□□ -1.3
PRKDC-211ENST00000546304 RNPC3Q96LT9 517 aaKnown RBP6.93□□□□□ -1.3
PRKDC-211ENST00000546304 GSDMAQ96QA5 445 aa6.93□□□□□ -1.3
PRKDC-211ENST00000546304 NTPCRQ9BSD7 190 aaKnown RBP6.93□□□□□ -1.3
PRKDC-211ENST00000546304 SSBP4Q9BWG4 385 aaPredicted RBP6.93□□□□□ -1.3
PRKDC-211ENST00000546304 KRTAP4-6Q9BYQ5 205 aa6.93□□□□□ -1.3
PRKDC-211ENST00000546304 ADAM19Q9H013 955 aa6.93□□□□□ -1.3
PRKDC-211ENST00000546304 FZD8Q9H461 694 aa6.93□□□□□ -1.3
PRKDC-211ENST00000546304 PDZD7Q9H5P4 517 aa6.93□□□□□ -1.3
PRKDC-211ENST00000546304 DZANK1Q9NVP4 752 aa6.93□□□□□ -1.3
PRKDC-211ENST00000546304 RMND1Q9NWS8 449 aa6.93□□□□□ -1.3
PRKDC-211ENST00000546304 ANKFY1Q9P2R3 1169 aa6.93□□□□□ -1.3
PRKDC-211ENST00000546304 TBX20Q9UMR3 447 aa6.93□□□□□ -1.3
PRKDC-211ENST00000546304 ABHD14A-ACY1A0A1B0GW23 586 aa6.92□□□□□ -1.3
PRKDC-211ENST00000546304 K7ERI5 159 aa6.92□□□□□ -1.3
PRKDC-211ENST00000546304 N4BP3O15049 544 aa6.92□□□□□ -1.3
PRKDC-211ENST00000546304 PHACTR2O75167 634 aa6.92□□□□□ -1.3
PRKDC-211ENST00000546304 PIGRP01833 764 aa6.92□□□□□ -1.3
PRKDC-211ENST00000546304 HOXA11P31270 313 aaPredicted RBP6.92□□□□□ -1.3
PRKDC-211ENST00000546304 KCNJ6P48051 423 aa6.92□□□□□ -1.3
PRKDC-211ENST00000546304 LIG4P49917 911 aa6.92□□□□□ -1.3
PRKDC-211ENST00000546304 RAB27AP51159 221 aa6.92□□□□□ -1.3
PRKDC-211ENST00000546304 DEFB103AP81534 67 aa6.92□□□□□ -1.3
PRKDC-211ENST00000546304 GTF2BQ00403 316 aa6.92□□□□□ -1.3
PRKDC-211ENST00000546304 NCBP1Q09161 790 aaKnown RBP6.92□□□□□ -1.3
PRKDC-211ENST00000546304 IKBKEQ14164 716 aa6.92□□□□□ -1.3
PRKDC-211ENST00000546304 DSC3Q14574 896 aa6.92□□□□□ -1.3
PRKDC-211ENST00000546304 NOLC1Q14978 699 aaKnown RBP eCLIP6.92□□□□□ -1.3
PRKDC-211ENST00000546304 CAMK4Q16566 473 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms